FFCP PHASE1:Hg19::chr6:24721054..24721074,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:24721054..24721074,- to FFCP PHASE1:Hg19::chr6:24721054..24721074,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81688 | |EntrezGene=81688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20998 | |HGNC=20998 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZU0 | |UniProt=Q9GZU0 | ||
|association_with_transcript=0bp_to_ENST00000378119_5end | |||
|cluster_id=chr6:24721054..24721074,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_C6orf62_5end | |||
|id=chr6:24721054..24721074,- | |||
|ontology_enrichment_celltype=CL:0000763!7.55e-28!112;CL:0000049!7.55e-28!112;CL:0000766!5.86e-27!76;CL:0002009!1.42e-25!65;CL:0000557!1.03e-24!71;CL:0002194!1.89e-24!63;CL:0000576!1.89e-24!63;CL:0000040!1.89e-24!63;CL:0000559!1.89e-24!63;CL:0000839!1.49e-23!70;CL:0002057!7.04e-22!42;CL:0000860!4.64e-21!45;CL:0000037!1.64e-20!172;CL:0000566!1.64e-20!172;CL:0002032!1.99e-19!165;CL:0000837!1.99e-19!165;CL:0000738!4.64e-19!140;CL:0000988!3.44e-18!182;CL:0002031!4.33e-15!124;CL:0002087!3.73e-14!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-19;33!CL:0002057;2.78e-19;33!CL:0000473;1.13e-18;39!CL:0000234;1.13e-18;39!CL:0000576;7.21e-13;48!CL:0000766;7.25e-12;69!CL:0000763;4.16e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.49e-28,108;CL:0000049,8.49e-28,108;CL:0000766,3.53e-27,72;CL:0002009,6.64e-26,61;CL:0000557,6.31e-25,67;CL:0000473,6.79e-25,48;CL:0000234,6.79e-25,48;CL:0002194,9.03e-25,59;CL:0000576,9.03e-25,59;CL:0000040,9.03e-25,59;CL:0000559,9.03e-25,59;CL:0000839,9.64e-24,66;CL:0000860,7.04e-22,42;CL:0002057,7.04e-22,42;CL:0000037,3.08e-20,168;CL:0002032,3.69e-19,161;CL:0000837,3.69e-19,161;CL:0000738,7.87e-19,136;CL:0000988,1.89e-18,177;CL:0002031,7.25e-15,120;CL:0002087,6.20e-14,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-16;42!CL:0000049;1.36e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.11e-27!102;UBERON:0003061!4.11e-27!102;UBERON:0002193!8.02e-23!112;UBERON:0002371!1.13e-21!80;UBERON:0001474!4.69e-20!86;UBERON:0004765!1.05e-17!101;UBERON:0001434!1.05e-17!101;UBERON:0002405!1.14e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.15e-27,98;UBERON:0003061,4.15e-27,98;UBERON:0002193,1.06e-22,108;UBERON:0002371,1.03e-21,76;UBERON:0001474,5.12e-20,82;UBERON:0004765,7.81e-18,90;UBERON:0002405,8.54e-18,93;UBERON:0001434,3.79e-17,100;UBERON:0003081,1.32e-07,203 | |||
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| ||
|short_description=p1@C6orf62 | |||
}} | }} |
Latest revision as of 06:39, 17 September 2015
Short description: | p1@C6orf62 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf62_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000378119_5end |
EntrezGene: | C6orf62 |
HGNC: | 20998 |
UniProt: | Q9GZU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.49e-28 | 108 |
common myeloid progenitor | 8.49e-28 | 108 |
myeloid leukocyte | 3.53e-27 | 72 |
macrophage dendritic cell progenitor | 6.64e-26 | 61 |
granulocyte monocyte progenitor cell | 6.31e-25 | 67 |
defensive cell | 6.79e-25 | 48 |
phagocyte | 6.79e-25 | 48 |
monopoietic cell | 9.03e-25 | 59 |
monocyte | 9.03e-25 | 59 |
monoblast | 9.03e-25 | 59 |
promonocyte | 9.03e-25 | 59 |
myeloid lineage restricted progenitor cell | 9.64e-24 | 66 |
classical monocyte | 7.04e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.04e-22 | 42 |
hematopoietic stem cell | 3.08e-20 | 168 |
hematopoietic oligopotent progenitor cell | 3.69e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.69e-19 | 161 |
leukocyte | 7.87e-19 | 136 |
hematopoietic cell | 1.89e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 7.25e-15 | 120 |
nongranular leukocyte | 6.20e-14 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.15e-27 | 98 |
blood island | 4.15e-27 | 98 |
hemolymphoid system | 1.06e-22 | 108 |
bone marrow | 1.03e-21 | 76 |
bone element | 5.12e-20 | 82 |
skeletal element | 7.81e-18 | 90 |
immune system | 8.54e-18 | 93 |
skeletal system | 3.79e-17 | 100 |
lateral plate mesoderm | 1.32e-07 | 203 |