FFCP PHASE1:Hg19::chr6:22221030..22221034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_AL117559_5end | |||
|cluster_id=chr6:22221030..22221034,+ | |||
|coexpression_cluster_id=C1975 | |||
|description=CAGE_peak_1_at_AL117559_5end | |||
|id=chr6:22221030..22221034,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.40e-07!3;CL:0005012!1.40e-07!3;CL:0000067!1.40e-07!3;CL:0002304!1.40e-07!3;CL:0002605!1.43e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.21e-40;1!CL:1000600;1.21e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,9.91e-41,1;CL:1000600,9.91e-41,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.60e-11;4!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.39e-35!34;UBERON:0003528!1.39e-35!34;UBERON:0001893!1.32e-32!34;UBERON:0001869!4.44e-32!32;UBERON:0002791!4.09e-31!33;UBERON:0002780!4.66e-31!41;UBERON:0001890!4.66e-31!41;UBERON:0006240!4.66e-31!41;UBERON:0003080!3.77e-30!42;UBERON:0001049!5.23e-30!57;UBERON:0005068!5.23e-30!57;UBERON:0006241!5.23e-30!57;UBERON:0007135!5.23e-30!57;UBERON:0001017!2.73e-29!82;UBERON:0005743!1.89e-27!86;UBERON:0002616!1.21e-26!59;UBERON:0003075!2.82e-26!86;UBERON:0007284!2.82e-26!86;UBERON:0000955!3.35e-26!69;UBERON:0006238!3.35e-26!69;UBERON:0002346!3.46e-26!90;UBERON:0000073!2.47e-25!94;UBERON:0001016!2.47e-25!94;UBERON:0003056!6.84e-24!61;UBERON:0000956!6.39e-23!25;UBERON:0000203!6.39e-23!25;UBERON:0002619!8.54e-18!22;UBERON:0001950!3.23e-17!20;UBERON:0000924!5.78e-17!173;UBERON:0006601!5.78e-17!173;UBERON:0004121!1.06e-16!169;UBERON:0000153!8.10e-16!129;UBERON:0007811!8.10e-16!129;UBERON:0002308!1.43e-14!9;UBERON:0000125!1.43e-14!9;UBERON:0000033!7.52e-14!123;UBERON:0000064!4.21e-12!219;UBERON:0002420!2.36e-11!9;UBERON:0007245!2.36e-11!9;UBERON:0010009!2.36e-11!9;UBERON:0010011!2.36e-11!9;UBERON:0000454!2.36e-11!9;UBERON:0007023!3.05e-11!115;UBERON:0009663!3.69e-11!7;UBERON:0000369!2.73e-09!4;UBERON:0002435!2.73e-09!4;UBERON:0000204!2.73e-09!4;UBERON:0010082!2.73e-09!4;UBERON:0001871!3.99e-09!7;UBERON:0000483!4.16e-09!309;UBERON:0000119!6.85e-09!312;UBERON:0000025!4.51e-08!194;UBERON:0005383!8.66e-08!3;UBERON:0005382!8.66e-08!3;UBERON:0001778!1.40e-07!3;UBERON:0001775!1.40e-07!3;UBERON:0000922!2.26e-07!612;UBERON:0000477!2.28e-07!286;UBERON:0006331!6.63e-07!3;UBERON:0000481!8.06e-07!347;UBERON:0002771!8.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.21e-40;1!UBERON:0001256;1.21e-40;1!UBERON:0001259;1.21e-40;1!UBERON:0001255;4.21e-21;2!UBERON:0001556;4.21e-21;2!UBERON:0002114;1.96e-14;2!UBERON:0001872;2.53e-09;5!UBERON:0002021;2.86e-09;5!UBERON:0000365;2.86e-09;5!UBERON:0002108;3.35e-09;4!UBERON:0000922;9.86e-09;49!UBERON:0001950;1.29e-08;20!UBERON:0002619;5.97e-08;22!UBERON:0005910;6.13e-08;6!UBERON:0000956;3.84e-07;25!UBERON:0000203;3.84e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,9.91e-41,1;UBERON:0001256,9.91e-41,1;UBERON:0001259,9.91e-41,1;UBERON:0001255,3.81e-21,2;UBERON:0001556,3.81e-21,2;UBERON:0002114,1.83e-14,2;UBERON:0001872,2.53e-09,5;UBERON:0000365,2.74e-09,5;UBERON:0002021,2.97e-09,5;UBERON:0002108,3.22e-09,4;UBERON:0001950,1.32e-08,20;UBERON:0005910,5.92e-08,6;UBERON:0002619,6.08e-08,22;UBERON:0000956,3.90e-07,25;UBERON:0000203,3.90e-07,25 | |||
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| ||
|short_description=p1@AL117559 | |||
}} | }} |
Latest revision as of 22:40, 30 July 2015
Short description: | p1@AL117559 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AL117559_5end |
Coexpression cluster: | C1975_transitionalcell_parietal_occipital_duodenum_temporal_small_brain |
Association with transcript: | 20bp_to_AL117559_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 9.91e-41 | 1 |
lower urinary tract cell | 9.91e-41 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 9.91e-41 | 1 |
wall of urinary bladder | 9.91e-41 | 1 |
mucosa of urinary bladder | 9.91e-41 | 1 |
urinary bladder | 3.81e-21 | 2 |
lower urinary tract | 3.81e-21 | 2 |
duodenum | 1.83e-14 | 2 |
parietal lobe | 2.53e-09 | 5 |
urothelium | 2.74e-09 | 5 |
occipital lobe | 2.97e-09 | 5 |
small intestine | 3.22e-09 | 4 |
neocortex | 1.32e-08 | 20 |
transitional epithelium | 5.92e-08 | 6 |
regional part of cerebral cortex | 6.08e-08 | 22 |
cerebral cortex | 3.90e-07 | 25 |
pallium | 3.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |