FFCP PHASE1:Hg19::chr6:136571400..136571457,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:136571400..136571457,- to FFCP PHASE1:Hg19::chr6:136571400..136571457,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=113115 | |EntrezGene=113115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21115 | |HGNC=21115 | ||
|TSSclassifier=strong | |||
|UniProt=E9PN39,Q6P444 | |UniProt=E9PN39,Q6P444 | ||
|association_with_transcript=0bp_to_ENST00000367784,ENST00000418509,ENST00000420702,ENST00000445767,NM_001099286,NM_138419,uc003qgt.1,uc003qgu.1,uc010kgp.1_5end | |||
|cluster_id=chr6:136571400..136571457,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_FAM54A_5end | |||
|id=chr6:136571400..136571457,- | |||
|ontology_enrichment_celltype=CL:0000012!2.63e-19!682;CL:0000548!2.68e-19!679;CL:0000004!2.68e-19!679;CL:0000255!2.68e-19!679;CL:0000066!2.39e-14!254;CL:0000003!3.12e-13!722;CL:0000063!4.60e-11!578;CL:0000144!3.56e-09!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.18e-13,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.75e-45!239;DOID:162!4.17e-45!235;DOID:2531!6.24e-25!51;DOID:0060083!6.24e-25!51;DOID:0050686!3.24e-24!137;DOID:1240!2.39e-20!39;DOID:0050687!1.27e-17!143;DOID:8692!1.37e-16!31;DOID:305!6.31e-15!106;DOID:0060058!2.21e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.01e-17;31!DOID:1240;3.42e-17;39!DOID:2531;2.42e-16;51!DOID:0060083;2.42e-16;51!DOID:0060058;7.08e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.25e-45,235;DOID:14566,1.57e-45,239;DOID:2531,1.90e-26,51;DOID:0060083,1.90e-26,51;DOID:0050686,3.62e-24,137;DOID:1240,6.91e-22,39;DOID:8692,8.07e-18,31;DOID:0050687,1.69e-17,143;DOID:305,9.14e-15,106;DOID:0060058,7.34e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.281908808191942,0,0,0,7.59899634504932,0,0.522371256399677,3.19454117451962,0,3.49506195408276,0.527533956456907,0.866364470720326,0,1.34465029290355,0.602694528023977,0.730310090387373,0,3.81675280038043,1.22400414746552,0.313454721478088,5.72471974262113,3.96935832711364,5.14724822338691,10.4686365874693,10.7551772179429,10.7833770399741,0.393364276848904,0.767658796194425,0.464448369948228,0.919421224478927,2.409647350226,0.369754010166788,14.9511697119982,13.2217386213302,2.34880351467878,0,0.200544447470142,0.651032612147555,2.01523926815932,0.971680998056939,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,1.04829322754188,0.673971786878971,0.150176892841506,0.64290234678832,1.14005097496499,0.99458338599545,0.91332076882317,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,0.560508562981536,8.42829071280246,0.196709770113833,0,0.205601498999509,1.33749196312542,0.32592226663359,0,0,5.57052284425868,0.294605907474837,1.10766947291811,0.812411591295047,3.45846563259323,4.1618991219161,4.43982342429925,4.42160028457357,5.506258628966,0,0,0,7.59172596073693,0.383220493601921,0,0.506039384039006,0.637130828648193,0.651083453856419,0,0.451725357233318,0.127986611154418,1.24930726552346,0.947109008176067,0.821127996921047,0.201606743224732,0.534880391567015,0.289648807765598,0,1.34140171940727,2.55725123687061,7.59022220007589,2.00535164254356,0,0.795285947051099,0.486634870302636,3.68685786939865,0.886917589850256,1.22968699970376,2.88153966094968,1.45718115317017,4.44941331341315,0.324547393654683,1.91542711029194,1.32957960518865,0.238490624305342,0.571994910780128,0.371457501329565,2.58391129576717,0.860234595106124,2.42998351125316,1.69592382577203,1.67799774483962,2.20094433552054,4.17989933073621,1.55050055501597,0.71153252537342,1.67360306382335,2.01414658554573,1.52054421143703,0.732186172644509,4.04429388380456,0,6.07238152331742,1.79623498100936,3.71617885594963,0,1.89853131913626,1.64881569537367,0,0,2.18047026071267,0,2.91250176828533,0.794455084879313,6.3104056564739,4.965357350777,0.560677600142307,0,1.2333377420858,2.48968828319813,1.48181739276657,3.92308567472301,0.605429710579726,0.576175924479999,2.34321431833797,0.936480230490962,5.70471821544449,0.597794722207204,5.75429043354448,4.04682360920329,8.70795001553941,1.42907919878425,6.38738450021193,0.723280468230358,0,1.23633464639278,3.64064544775211,0,7.07011678607078,6.00568895385428,7.48073111807294,3.07284334616587,1.22595118319608,0.150238058906597,4.65071950956086,4.12596162084383,0,0.423863802319124,5.40163972951924,2.78241828943785,0,1.30281799432113,3.54430297706659,3.80004320128675,2.77677151668526,0.460249493211497,0.80823028409406,3.55009592516614,4.43309232201617,4.74769658469365,0.966304265816484,4.36393792945335,2.29443676311203,3.65921118388786,4.5060121229305,2.90484857173796,2.38420426535352,3.28017106138317,2.55484151353081,1.56449532329816,0,4.14404764057442,0,0.721879481669586,2.36613600079688,2.69735504124963,5.06123162755312,3.74999507290139,2.83243277320128,2.60997681022206,3.10112008768378,4.12065076763227,2.69323009862473,0.738155454624648,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,13.6853560818542,6.76436411987125,2.40194934417936,1.31700342490351,1.1240175325762,6.23279628952111,3.51836091602412,1.3032332212413,1.03993478527958,7.21656710126366,3.70977295920246,0,2.45422961193825,1.85194205030644,3.42457474022277,7.11183958163348,9.4433477830436,1.72351904261178,3.51006397708857,3.26988557035202,3.74935335947108,1.6798212819886,2.55195175036296,9.85143749731331,11.3347236020445,4.21720947081732,4.43396914106349,4.75461543671421,0.414656231081544,1.15295962733569,0.37872730027914,9.33419046094885,2.67391897890794,5.86087236050235,0,11.4138516900689,5.70651809903443,1.42913216315289,4.26098120512371,1.74384027533312,8.5072411552302,0.258543431515556,0,8.45302752556,1.06375246633948,2.08014873822732,4.37252536245642,2.83698264046557,1.3321108950805,1.00084595560703,0.542621605391443,0,10.0978217131058,1.77695974371273,8.71147060226772,0.602878754119172,0,1.09970290300263,0,0.502257091432126,2.10833939483032,2.87549826589899,0,2.85273810081437,2.17171960001369,1.64381058040307,4.65558504423729,9.97557781542393,0.788123040807709,0.431255149719035,0.385029108839245,2.54094624222463,0,3.09315525111078,2.01019518401218,1.27587750330633,0,0,0,0,0.500170521059677,0.813795071099207,0.207970861530807,1.07057393278297,0.788512075169673,0.702848489956279,0,0,0,2.65690239414175,0.921845842708516,3.30157734978715,0.195801157462741,0.686286847621712,0,0.215714200818617,0.106727557803444,1.21251028578504,3.32870879020994,1.5119514666484,0,0.920771839728375,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,4.00945203886904,4.97172830876756,5.74890092096664,1.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| ||
|short_description=p1@FAM54A | |||
}} | }} |
Latest revision as of 00:07, 25 September 2015
Short description: | p1@FAM54A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM54A_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000367784, ENST00000418509, ENST00000420702, ENST00000445767, NM_001099286, NM_138419, uc003qgt.1, uc003qgu.1, uc010kgp.1_5end |
EntrezGene: | FAM54A |
HGNC: | 21115 |
UniProt: | E9PN39Q6P444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.18e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.25e-45 | 235 |
disease of cellular proliferation | 1.57e-45 | 239 |
hematologic cancer | 1.90e-26 | 51 |
immune system cancer | 1.90e-26 | 51 |
organ system cancer | 3.62e-24 | 137 |
leukemia | 6.91e-22 | 39 |
myeloid leukemia | 8.07e-18 | 31 |
cell type cancer | 1.69e-17 | 143 |
carcinoma | 9.14e-15 | 106 |
lymphoma | 7.34e-08 | 10 |