FFCP PHASE1:Hg19::chr5:79703422..79703442,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:79703422..79703442,+ to FFCP PHASE1:Hg19::chr5:79703422..79703442,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9765 | |EntrezGene=9765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20756 | |HGNC=20756 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3T8 | |UniProt=Q7Z3T8 | ||
|association_with_transcript=-389bp_to_ENST00000338008_5end | |||
|cluster_id=chr5:79703422..79703442,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_ZFYVE16_5end | |||
|id=chr5:79703422..79703442,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.73e-36!76;CL:0002009!2.56e-33!65;CL:0002194!1.94e-32!63;CL:0000576!1.94e-32!63;CL:0000040!1.94e-32!63;CL:0000559!1.94e-32!63;CL:0000557!2.36e-31!71;CL:0000839!1.56e-29!70;CL:0002057!1.22e-28!42;CL:0000860!1.63e-27!45;CL:0000763!7.26e-27!112;CL:0000049!7.26e-27!112;CL:0000738!4.52e-18!140;CL:0000037!1.42e-15!172;CL:0000566!1.42e-15!172;CL:0002032!2.66e-14!165;CL:0000837!2.66e-14!165;CL:0002087!4.71e-14!119;CL:0000988!7.35e-14!182;CL:0002031!4.35e-13!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-48;33!CL:0002057;1.02e-48;33!CL:0000473;4.94e-48;39!CL:0000234;4.94e-48;39!CL:0000576;2.66e-33;48!CL:0000766;1.70e-26;69!CL:0000763;3.44e-13;100!CL:0000094;9.62e-12;8!CL:0000235;2.76e-10;6!CL:0000081;3.29e-10;11!CL:0000738;4.46e-08;136!CL:0002087;5.83e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.47e-64,72;CL:0002194,2.64e-59,59;CL:0000576,2.64e-59,59;CL:0000040,2.64e-59,59;CL:0000559,2.64e-59,59;CL:0002009,3.07e-59,61;CL:0000473,5.23e-59,48;CL:0000234,5.23e-59,48;CL:0000557,1.95e-52,67;CL:0000839,2.85e-51,66;CL:0000860,6.13e-50,42;CL:0002057,6.13e-50,42;CL:0000763,3.79e-41,108;CL:0000049,3.79e-41,108;CL:0000738,1.76e-28,136;CL:0002087,1.33e-23,115;CL:0002031,4.65e-23,120;CL:0002032,2.91e-22,161;CL:0000837,2.91e-22,161;CL:0000037,2.08e-21,168;CL:0000988,2.82e-20,177;CL:0000094,6.08e-12,8;CL:0000081,2.48e-10,11;CL:0000235,2.64e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-36;42!CL:0000049;7.44e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.01e-31!102;UBERON:0003061!2.01e-31!102;UBERON:0002193!1.34e-30!112;UBERON:0002371!5.68e-27!80;UBERON:0002405!1.29e-25!115;UBERON:0001474!9.12e-25!86;UBERON:0004765!2.10e-19!101;UBERON:0001434!2.10e-19!101;UBERON:0007023!4.57e-15!115;UBERON:0003081!7.48e-11!216;UBERON:0002204!2.39e-08!167;UBERON:0000926!5.27e-07!448;UBERON:0004120!5.27e-07!448;UBERON:0006603!5.27e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-44,76;UBERON:0002390,5.14e-43,98;UBERON:0003061,5.14e-43,98;UBERON:0001474,1.06e-41,82;UBERON:0002193,8.62e-39,108;UBERON:0004765,1.72e-36,90;UBERON:0002405,3.95e-36,93;UBERON:0001434,3.60e-31,100;UBERON:0003081,2.30e-16,203;UBERON:0002204,9.41e-14,167;UBERON:0000926,2.31e-08,315;UBERON:0004120,2.31e-08,315;UBERON:0006603,2.31e-08,315 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,1.96682138424452,2.68680578668049,1.23852898652861,0,0,0,0.154934401160603,0,0.880801318004542,3.32397245119126,4.8130667392834,6.07630438004385,13.6588439286354,15.87078963493,15.196958490417,6.54292074508041,21.5389287902621,15.2827958548324,21.383471395323,51.3959860027282,50.1724320850068,14.0969272237854,20.7490172288572,20.1009895405297,40.679990326921,70.357830510637,51.4620649058499,12.6122367493545,35.2048933574621,30.7871173689766,18.3650335422542,48.4602830884901,33.8848676673492,5.60747210317417,9.97318288108159,11.08184351385,15.381089647315,57.3059076938051,52.9398911646239,15.8286659111748,15.644487552606,22.1532621599219,19.9781835869012,72.5506942895502,72.4698867239625,1.05627643155971,0.637812899895131,0.838634582033504,1.46027220490444,2.4028302854641,3.2145117339416,0.855038231223746,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,1.32171328579026,4.48406850385229,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.327447688744282,0,0,1.9472843619281,2.61194605948901,5.05240249971688,0.476981248610684,1.14398982156026,0.371457501329565,0.79504962946682,0,0,0,0.419499436209906,0.550236083880135,0.626984899610432,0.258416759169329,0.35576626268671,1.67360306382335,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.535798369704479,0.673588117878509,0.112611480483322,0,0,0.549605231791222,9.22462922052443,7.75560528296651,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0,0.757301322732344,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.761016608938393,0,0.858486162094873,7.87894419479671,16.3802985597466,4.90482835552803,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.720599767084807,0.12624243342638,2.03193261734941,1.90994212779139,0,0,2.67351481028641,2.70308752059526,3.71574362419752,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,4.86495122564762,6.02708509718552,12.6500363689819,0,0,0,0,0.205476322550383,0,0.336255431980582,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,5.99205619157746,2.99161459204025,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.82707210449155,0.647142602455851,0.853820462427555,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,1.20859449591622,0,0,0.34444334449382,0,0.131124414959424,0,0.0770153371044148,0,0,0,1.13733384070897,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.709522128141196,0.422215270595328,0,0,0,0,0,0,2.7301702225266,0,0,0,0,1.52234282769651,3.82318603571188,5.69647187174163,0.714695326373367,1.64544909234478,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0.245040215981032,0.371606350251437,0.28853842595289,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0,0,0,1.70338495076131,0.687010689511529,0.614481528616916,0.447352215784832,0,0.19538809540204,0,0,0,0.66614393599564,0,0,3.95572084034114,0.121360521749513,0,0.852408440419239,0.47748896947538,0,0,0,0.422008249231538,0.222617410045812,0,0.63337622438398,0.19924798825107,1.38141957765574,0.503865495708552,0.306806047506464,0,0,0.0898683511473268,0,0.511572370226872,1.28236427328014,0,0,0.969332746095218,0.556608588971108,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.552896299656123,0.295547618953547,0.438770794307945,0,0.139423744278603,3.61666214967846,0.227884111694002,0.23056390438806,0.179515288819544,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0.392125068635479,0.503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| ||
|short_description=p4@ZFYVE16 | |||
}} | }} |
Latest revision as of 22:35, 18 September 2015
Short description: | p4@ZFYVE16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZFYVE16_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -389bp_to_ENST00000338008_5end |
EntrezGene: | ZFYVE16 |
HGNC: | 20756 |
UniProt: | Q7Z3T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.47e-64 | 72 |
monopoietic cell | 2.64e-59 | 59 |
monocyte | 2.64e-59 | 59 |
monoblast | 2.64e-59 | 59 |
promonocyte | 2.64e-59 | 59 |
macrophage dendritic cell progenitor | 3.07e-59 | 61 |
defensive cell | 5.23e-59 | 48 |
phagocyte | 5.23e-59 | 48 |
granulocyte monocyte progenitor cell | 1.95e-52 | 67 |
myeloid lineage restricted progenitor cell | 2.85e-51 | 66 |
classical monocyte | 6.13e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.13e-50 | 42 |
myeloid cell | 3.79e-41 | 108 |
common myeloid progenitor | 3.79e-41 | 108 |
leukocyte | 1.76e-28 | 136 |
nongranular leukocyte | 1.33e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 4.65e-23 | 120 |
hematopoietic oligopotent progenitor cell | 2.91e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-22 | 161 |
hematopoietic stem cell | 2.08e-21 | 168 |
hematopoietic cell | 2.82e-20 | 177 |
granulocyte | 6.08e-12 | 8 |
blood cell | 2.48e-10 | 11 |
macrophage | 2.64e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-44 | 76 |
hematopoietic system | 5.14e-43 | 98 |
blood island | 5.14e-43 | 98 |
bone element | 1.06e-41 | 82 |
hemolymphoid system | 8.62e-39 | 108 |
skeletal element | 1.72e-36 | 90 |
immune system | 3.95e-36 | 93 |
skeletal system | 3.60e-31 | 100 |
lateral plate mesoderm | 2.30e-16 | 203 |
musculoskeletal system | 9.41e-14 | 167 |
mesoderm | 2.31e-08 | 315 |
mesoderm-derived structure | 2.31e-08 | 315 |
presumptive mesoderm | 2.31e-08 | 315 |