FFCP PHASE1:Hg19::chr5:72416466..72416490,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:72416466..72416490,+ to FFCP PHASE1:Hg19::chr5:72416466..72416490,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=134285 | |EntrezGene=134285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27031 | |HGNC=27031 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVE6 | |UniProt=Q8WVE6 | ||
|association_with_transcript=70bp_to_ENST00000287773_5end | |||
|cluster_id=chr5:72416466..72416490,+ | |||
|coexpression_cluster_id=C4517 | |||
|description=CAGE_peak_2_at_TMEM171_5end | |||
|id=chr5:72416466..72416490,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.52e-27!180;CL:0000222!2.13e-20!119;CL:0000359!9.27e-19!32;CL:0002321!8.11e-18!248;CL:0000183!1.00e-17!59;CL:0000680!1.43e-17!57;CL:0000056!1.43e-17!57;CL:0000355!1.43e-17!57;CL:0000220!1.46e-17!246;CL:0000057!1.29e-16!75;CL:0000187!2.79e-16!54;CL:0000192!4.61e-16!42;CL:0000514!4.61e-16!42;CL:0000393!1.66e-13!60;CL:0000211!1.66e-13!60;CL:0000548!8.20e-12!679;CL:0000004!8.20e-12!679;CL:0000255!8.20e-12!679;CL:0000012!2.88e-11!682;CL:0002620!1.97e-09!23;CL:0000144!2.94e-09!625;CL:0000076!7.18e-09!62;CL:0002371!1.08e-08!591;CL:0002539!1.18e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.31e-24;32!CL:0000192;2.45e-12;43!CL:0002620;7.40e-11;23!CL:0002539;2.57e-09;10!CL:0000187;2.10e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.55e-25,32;CL:0000222,1.11e-17,121;CL:0000192,1.28e-16,43;CL:0000514,1.28e-16,43;CL:0000680,1.32e-15,58;CL:0000056,1.32e-15,58;CL:0000355,1.32e-15,58;CL:0000057,3.44e-15,76;CL:0000187,5.64e-14,55;CL:0000393,1.97e-11,61;CL:0000211,1.97e-11,61;CL:0002620,6.47e-11,23;CL:0002321,2.55e-10,250;CL:0002539,2.88e-09,10;CL:0000723,7.47e-07,433;CL:0000048,8.94e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;2.45e-12;43!CL:0000355;3.22e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.40e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.09e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.06e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.20e-23!42;UBERON:0003509!4.20e-23!42;UBERON:0004572!4.20e-23!42;UBERON:0004872!3.79e-20!84;UBERON:0002049!4.97e-20!79;UBERON:0007798!4.97e-20!79;UBERON:0001981!9.06e-20!60;UBERON:0007500!9.06e-20!60;UBERON:0004537!9.06e-20!60;UBERON:0006965!9.06e-20!60;UBERON:0000914!2.21e-19!83;UBERON:0002329!2.21e-19!83;UBERON:0003077!2.21e-19!83;UBERON:0003059!2.21e-19!83;UBERON:0007282!2.21e-19!83;UBERON:0009618!2.21e-19!83;UBERON:0007285!2.21e-19!83;UBERON:0000055!2.80e-19!69;UBERON:0000486!1.06e-18!82;UBERON:0004290!5.19e-18!70;UBERON:0004573!1.48e-17!33;UBERON:0004571!1.48e-17!33;UBERON:0002385!3.02e-15!63;UBERON:0001015!3.02e-15!63;UBERON:0000383!3.02e-15!63;UBERON:0003914!3.48e-15!118;UBERON:0001134!6.64e-15!61;UBERON:0002036!6.64e-15!61;UBERON:0003082!6.64e-15!61;UBERON:0004535!4.73e-14!110;UBERON:0000490!4.82e-14!138;UBERON:0005256!5.75e-14!143;UBERON:0001009!6.92e-13!113;UBERON:0002100!2.19e-10!216;UBERON:0000947!3.82e-10!21;UBERON:0010191!3.82e-10!21;UBERON:0000119!1.27e-09!312;UBERON:0000483!9.31e-09!309;UBERON:0000475!1.60e-08!365;UBERON:0004237!1.18e-07!10;UBERON:0004695!1.18e-07!10;UBERON:0002111!1.18e-07!10;UBERON:0004178!1.18e-07!10;UBERON:0002199!1.62e-07!45;UBERON:0002416!1.62e-07!45;UBERON:0002097!4.06e-07!40;UBERON:0003102!6.35e-07!95;UBERON:0000481!7.45e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.42e-24;42!UBERON:0003509;9.42e-24;42!UBERON:0004572;9.42e-24;42!UBERON:0004573;4.90e-22;33!UBERON:0004571;4.90e-22;33!UBERON:0007500;1.82e-15;56!UBERON:0001981;1.82e-15;56!UBERON:0004537;1.82e-15;56!UBERON:0000055;1.03e-13;65!UBERON:0000947;1.18e-13;21!UBERON:0010191;1.18e-13;21!UBERON:0002049;9.35e-11;75!UBERON:0007798;9.35e-11;75!UBERON:0003914;6.45e-10;74!UBERON:0004237;2.57e-09;10!UBERON:0004695;2.57e-09;10!UBERON:0002111;2.57e-09;10!UBERON:0004178;2.57e-09;10!UBERON:0002199;4.31e-07;46!UBERON:0002416;4.31e-07;46!UBERON:0002097;8.43e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.14e-32,42;UBERON:0003509,2.14e-32,42;UBERON:0004572,2.14e-32,42;UBERON:0004872,2.65e-27,83;UBERON:0000055,3.62e-27,68;UBERON:0007500,1.29e-26,59;UBERON:0001981,1.29e-26,59;UBERON:0004537,1.29e-26,59;UBERON:0006965,1.29e-26,59;UBERON:0002049,3.25e-25,78;UBERON:0007798,3.25e-25,78;UBERON:0004573,2.11e-24,33;UBERON:0004571,2.11e-24,33;UBERON:0004535,1.30e-19,109;UBERON:0001009,1.63e-18,112;UBERON:0000486,2.30e-18,83;UBERON:0003914,3.99e-18,117;UBERON:0002329,4.92e-18,71;UBERON:0003059,4.92e-18,71;UBERON:0007282,4.92e-18,71;UBERON:0004290,4.92e-18,71;UBERON:0009618,4.92e-18,71;UBERON:0007524,7.09e-18,73;UBERON:0003077,1.47e-17,72;UBERON:0007285,1.47e-17,72;UBERON:0007503,9.42e-17,78;UBERON:0000490,1.10e-14,148;UBERON:0002385,7.46e-14,64;UBERON:0001015,7.46e-14,64;UBERON:0000383,7.46e-14,64;UBERON:0001134,9.53e-14,62;UBERON:0002036,9.53e-14,62;UBERON:0003082,9.53e-14,62;UBERON:0000947,9.58e-14,21;UBERON:0010191,9.58e-14,21;UBERON:0005256,2.30e-10,122;UBERON:0002199,6.32e-10,46;UBERON:0002416,6.32e-10,46;UBERON:0004237,2.88e-09,10;UBERON:0004695,2.88e-09,10;UBERON:0002111,2.88e-09,10;UBERON:0004178,2.88e-09,10;UBERON:0000926,4.10e-09,315;UBERON:0004120,4.10e-09,315;UBERON:0006603,4.10e-09,315;UBERON:0002097,6.38e-09,41;UBERON:0002100,1.93e-07,199;UBERON:0003104,2.03e-07,160;UBERON:0009142,2.03e-07,160;UBERON:0000119,4.85e-07,309;UBERON:0003498,8.26e-07,5;UBERON:0005985,8.26e-07,5 | |||
|phase1_expression=1.09007027562334,1.49870366723688,1.40954404095971,2.00146596706261,0.446961094427288,0.872338524100369,0,3.79031924056099,0,0.737201809504527,0,0.873765488520689,0.791300934685361,0,0.331397375727916,5.3786011716142,7.23233433628772,5.84248072309899,3.41552959153355,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,1.34140171940727,0.895037932904712,1.0843174571537,1.00267582127178,0.724232594804119,0,0.973269740605272,0.283604451492204,0.665188192387692,1.05401742831751,0.458426764241994,0.364295288292542,0.741568885568859,0,0,0,0,0,0,2.78267370313387,0,2.42998351125316,5.08777147731609,2.93649605346934,4.40188867104108,3.13492449805216,0,0,0,0.402829317109147,0,0.732186172644509,2.20597848207521,2.43042584364528,1.60739510911344,0.898117490504679,1.0135033243499,3.06633274931766,2.84779697870439,1.28241220751285,0,0,0.436094052142534,0.496971951695318,2.40597972162702,3.83986624358335,3.72887606973458,3.90135220418193,0,2.1349799145941,0.74000264525148,0,3.3677668017422,2.7788523529288,0.454072282934794,0,0.234321431833797,4.37024107562449,3.99330275081114,5.82849854152024,1.996386476944,1.61872944368132,1.54495887372473,1.02077085627447,0.368502951935304,0.413303124703062,0,0.989067717114227,10.9219363432563,7.18618141816238,0.505008341862199,0.500474079487857,1.93944880838928,1.31693286264251,2.14541457059314,0.600952235626387,6.57906662328122,1.25572744982203,1.92201649936711,4.02670612203168,3.00091096084402,3.60683852334536,1.54584324027377,2.04728541964749,3.20675031258406,0.584622030967192,0.252433774244115,3.58994604704967,2.10139873864455,1.06502877754984,1.10827308050404,1.01736355386293,4.83152132908242,1.36373060295417,2.29443676311203,0.487894824518382,0.530119073285941,0.232387885739037,0,0,0,3.12899064659632,3.21620469096443,0,2.3218396401599,2.16563844500876,0,0.337169380156203,0,0.330881918197182,0,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,2.80483547606892,1.6462960453256,1.47008711385542,1.26755034821831,0,0,0,0,0.514703430895577,0.878002283269004,2.24803506515239,1.40740561376283,0.370353780634118,0,1.03993478527958,1.44331342025273,0,1.05667824812239,1.29929802984966,2.31492756288305,1.52203321787679,0,1.71697232418975,0,0,0,0.93733833986777,0.335964256397719,2.55195175036296,0.0895585227028483,0,1.91691339582606,0,0,1.24396869324463,0.288239906833923,0.12624243342638,0,1.52795370223311,1.17217447210047,3.4214489204541,2.57068731758309,2.70308752059526,1.14330573052231,5.27016096423195,6.5394010324992,2.71351657537515,1.68053230485111,3.57656445851882,1.690605505112,1.32969058292435,1.04007436911366,0.514414748524284,0,0.799266537048298,0.142977993658148,0,0,4.23457039581856,0,0,1.20575750823834,0.871533458600294,1.19967589418468,0,0,0,0,0,2.85273810081437,4.77778312003011,1.02738161275192,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,1.35632511849868,0.415941723061614,1.60586089917446,0.473107245101804,1.52283839490527,0.902838299183157,0,0,0,0,0.521301686808497,4.11182430671755,1.02943027143257,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0.744323423456331,1.38115775959256,0.561320188866147,1.15325234330131,1.53512174720011,1.76939313257968,4.45254199334973,2.46735510084249,5.50441348470694,3.36721339656617,10.904343012856,5.22946703069817,0.120859449591622,1.00253235151642,0.0920809889358963,0.459257792658427,0.910455840033585,0.131124414959424,0,0.847168708148562,0,0,1.05551628892876,0,0.850468526382578,0.215915916102139,1.54227252690289,0.541892875087706,2.50844886927427,3.3133915495855,4.15538004464362,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.0915694648183434,0.330037999682352,0.574265537996172,0,1.6068392984416,0.48335359146061,0.308097234229289,0.614014698904518,1.65403886981437,0.214840489736547,0.290033387828457,1.10794615640931,0.178064071293475,0.826424576804891,0.384380134730212,0.893288987462089,0.30347334256665,0.464845549297286,8.18512101759664,4.1822236209636,8.62494024493049,10.1138145760234,5.21959795245044,1.66791797193528,3.00562262158182,1.48863347743867,3.16379424718726,1.14378116354295,0.511795582622668,0,7.63687795022248,1.56989728039846,0.179872457583315,0,0.471249609382746,12.130948894399,6.34041284692033,5.89761838734574,0,18.2785117223463,6.33900880540533,0.136499911407986,0.141405431953713,4.52032466480971,5.51365343546124,3.3171948762061,6.57676327880644,2.31510213706675,0.655894752046633,4.8698490471049,2.16876448669825,4.50712964051586,1.00387946542836,0.0982490410131212,5.35006577221875,0.354761064070598,1.89996871767898,1.64647446479951,0.379473173765715,0,0.673554789078584,1.34060455107157,2.17781969722645,0.0941438007767792,0.43050537267123,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| ||
|short_description=p2@TMEM171 | |||
}} | }} |
Latest revision as of 15:52, 18 September 2015
Short description: | p2@TMEM171 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM171_5end |
Coexpression cluster: | C4517_Smooth_mesenchymal_colon_Meningeal_large_Preadipocyte_Fibroblast |
Association with transcript: | 70bp_to_ENST00000287773_5end |
EntrezGene: | TMEM171 |
HGNC: | 27031 |
UniProt: | Q8WVE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.55e-25 | 32 |
mesodermal cell | 1.11e-17 | 121 |
smooth muscle cell | 1.28e-16 | 43 |
smooth muscle myoblast | 1.28e-16 | 43 |
muscle precursor cell | 1.32e-15 | 58 |
myoblast | 1.32e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-15 | 58 |
fibroblast | 3.44e-15 | 76 |
muscle cell | 5.64e-14 | 55 |
electrically responsive cell | 1.97e-11 | 61 |
electrically active cell | 1.97e-11 | 61 |
skin fibroblast | 6.47e-11 | 23 |
embryonic cell | 2.55e-10 | 250 |
aortic smooth muscle cell | 2.88e-09 | 10 |
somatic stem cell | 7.47e-07 | 433 |
multi fate stem cell | 8.94e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.06e-08 | 14 |