FFCP PHASE1:Hg19::chr5:59783574..59783584,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25859 | |EntrezGene=25859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17263 | |HGNC=17263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000515734,NR_024617,uc003jsf.3,uc003jsg.2_5end | |||
|cluster_id=chr5:59783574..59783584,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_6_at_PART1_5end | |||
|id=chr5:59783574..59783584,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.75e-14;6!CL:0000153;7.57e-10;9!CL:0000447;7.57e-10;9!CL:0000182;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.66e-14,6;CL:0000138,2.66e-14,6;CL:0000153,7.41e-10,9;CL:0000447,7.41e-10,9;CL:0000182,1.73e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.66e-21;1!UBERON:0004161;3.76e-08;11!UBERON:0009497;4.95e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;4.52e-08;3!DOID:0060084;6.56e-08;3!DOID:127;6.56e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.52e-08,3;DOID:0060084,7.76e-08,3;DOID:127,7.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-20!115;UBERON:0003127!5.16e-12!2;UBERON:0001869!2.26e-08!32;UBERON:0003975!4.85e-08!22;UBERON:0001950!6.59e-08!20;UBERON:0000200!6.86e-08!6;UBERON:0001893!7.91e-08!34;UBERON:0002619!3.58e-07!22;UBERON:0004175!5.29e-07!25;UBERON:0001831!6.96e-07!1;UBERON:0001567!6.96e-07!1;UBERON:0008801!6.96e-07!1;UBERON:0002372!8.21e-07!1;UBERON:0001961!8.21e-07!1;UBERON:0001744!8.21e-07!1;UBERON:0001735!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.66e-21;1!UBERON:0001831;4.66e-21;1!UBERON:0001961;4.66e-21;1!UBERON:0001744;4.66e-21;1!UBERON:0001042;4.66e-21;1!UBERON:0001567;4.66e-21;1!UBERON:0001735;4.66e-21;1!UBERON:0001044;3.71e-14;6!UBERON:0003293;3.71e-14;6!UBERON:0003294;3.71e-14;6!UBERON:0010047;3.71e-14;6!UBERON:0003408;3.71e-14;6!UBERON:0000167;3.71e-14;6!UBERON:0003127;3.18e-11;2!UBERON:0006562;3.18e-11;2!UBERON:0001829;3.18e-11;2!UBERON:0004089;3.18e-11;2!UBERON:0000161;5.10e-10;19!UBERON:0000166;5.10e-10;19!UBERON:0002365;1.31e-09;31!UBERON:0002330;1.31e-09;31!UBERON:0000165;5.52e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.45e-21,1;UBERON:0001567,3.45e-21,1;UBERON:0008801,3.45e-21,1;UBERON:0002372,6.31e-21,1;UBERON:0001961,6.31e-21,1;UBERON:0001744,6.31e-21,1;UBERON:0001735,6.31e-21,1;UBERON:0001044,2.85e-14,6;UBERON:0003293,2.85e-14,6;UBERON:0003294,2.85e-14,6;UBERON:0010047,2.85e-14,6;UBERON:0000167,2.85e-14,6;UBERON:0003127,2.23e-11,2;UBERON:0001829,2.73e-11,2;UBERON:0004089,2.73e-11,2;UBERON:0001041,5.93e-11,87;UBERON:0002365,1.41e-10,31;UBERON:0002330,1.41e-10,31;UBERON:0003408,6.04e-09,10;UBERON:0000166,9.18e-09,22;UBERON:0004921,6.30e-08,118;UBERON:0001004,7.52e-07,74;UBERON:0000165,8.77e-07,29;UBERON:0000930,8.77e-07,29 | |||
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|short_description=p6@PART1 | |||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p6@PART1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PART1_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 34bp_to_ENST00000515734, NR_024617, uc003jsf.3, uc003jsg.2_5end |
EntrezGene: | PART1 |
HGNC: | 17263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.66e-14 | 6 |
chondrocyte | 2.66e-14 | 6 |
GAG secreting cell | 7.41e-10 | 9 |
carbohydrate secreting cell | 7.41e-10 | 9 |
hepatocyte | 1.73e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.45e-21 | 1 |
cheek | 3.45e-21 | 1 |
parotid gland primordium | 3.45e-21 | 1 |
tonsil | 6.31e-21 | 1 |
mucosa-associated lymphoid tissue | 6.31e-21 | 1 |
lymphoid tissue | 6.31e-21 | 1 |
tonsillar ring | 6.31e-21 | 1 |
saliva-secreting gland | 2.85e-14 | 6 |
gland of oral region | 2.85e-14 | 6 |
gland of foregut | 2.85e-14 | 6 |
oral gland | 2.85e-14 | 6 |
oral cavity | 2.85e-14 | 6 |
open tracheal system trachea | 2.23e-11 | 2 |
major salivary gland | 2.73e-11 | 2 |
midface | 2.73e-11 | 2 |
foregut | 5.93e-11 | 87 |
exocrine gland | 1.41e-10 | 31 |
exocrine system | 1.41e-10 | 31 |
gland of gut | 6.04e-09 | 10 |
oral opening | 9.18e-09 | 22 |
subdivision of digestive tract | 6.30e-08 | 118 |
respiratory system | 7.52e-07 | 74 |
mouth | 8.77e-07 | 29 |
stomodeum | 8.77e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.52e-08 | 3 |
cell type benign neoplasm | 7.76e-08 | 3 |
leiomyoma | 7.76e-08 | 3 |