FFCP PHASE1:Hg19::chr5:20575784..20575802,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:20575784..20575802,- to FFCP PHASE1:Hg19::chr5:20575784..20575802,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=169bp_to_ENST00000507632_5end | |||
|cluster_id=chr5:20575784..20575802,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_CDH18_5end | |||
|id=chr5:20575784..20575802,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.84e-18;3!UBERON:0006601;4.20e-15;82!UBERON:0006241;3.95e-08;3!UBERON:0003057;3.95e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.33e-86!57;UBERON:0005068!9.33e-86!57;UBERON:0006241!9.33e-86!57;UBERON:0007135!9.33e-86!57;UBERON:0001017!3.11e-72!82;UBERON:0005743!9.85e-72!86;UBERON:0002616!6.29e-70!59;UBERON:0000955!4.26e-68!69;UBERON:0006238!4.26e-68!69;UBERON:0003075!8.59e-66!86;UBERON:0007284!8.59e-66!86;UBERON:0000073!5.31e-64!94;UBERON:0001016!5.31e-64!94;UBERON:0002346!2.10e-62!90;UBERON:0002020!6.50e-61!34;UBERON:0003528!6.50e-61!34;UBERON:0001869!1.34e-59!32;UBERON:0001950!8.38e-58!20;UBERON:0002619!1.21e-57!22;UBERON:0002780!6.32e-57!41;UBERON:0001890!6.32e-57!41;UBERON:0006240!6.32e-57!41;UBERON:0001893!8.78e-56!34;UBERON:0003080!2.04e-55!42;UBERON:0002791!4.88e-53!33;UBERON:0000956!2.54e-50!25;UBERON:0000203!2.54e-50!25;UBERON:0000153!7.46e-44!129;UBERON:0007811!7.46e-44!129;UBERON:0007023!3.74e-42!115;UBERON:0003056!1.37e-41!61;UBERON:0000033!3.53e-40!123;UBERON:0004121!5.34e-36!169;UBERON:0000924!6.58e-35!173;UBERON:0006601!6.58e-35!173;UBERON:0003076!5.62e-31!15;UBERON:0003057!5.62e-31!15;UBERON:0004733!1.91e-22!12;UBERON:0002028!1.91e-22!12;UBERON:0007277!1.91e-22!12;UBERON:0004732!1.44e-20!13;UBERON:0000025!1.93e-20!194;UBERON:0000200!1.59e-19!6;UBERON:0001871!2.17e-19!7;UBERON:0000064!1.12e-16!219;UBERON:0001872!1.18e-16!5;UBERON:0002021!3.40e-16!5;UBERON:0000483!2.00e-15!309;UBERON:0002298!2.64e-15!8;UBERON:0000119!3.66e-15!312;UBERON:0000477!1.31e-14!286;UBERON:0000475!1.87e-14!365;UBERON:0004111!2.00e-14!241;UBERON:0002680!7.26e-14!9;UBERON:0001895!7.26e-14!9;UBERON:0010092!7.26e-14!9;UBERON:0002308!3.14e-12!9;UBERON:0000125!3.14e-12!9;UBERON:0002420!8.29e-12!9;UBERON:0007245!8.29e-12!9;UBERON:0010009!8.29e-12!9;UBERON:0010011!8.29e-12!9;UBERON:0000454!8.29e-12!9;UBERON:0000988!2.66e-11!3;UBERON:0001896!4.25e-11!3;UBERON:0005290!4.25e-11!3;UBERON:0010096!4.25e-11!3;UBERON:0002771!4.86e-11!3;UBERON:0002240!1.35e-10!3;UBERON:0000349!2.70e-10!5;UBERON:0000481!9.60e-09!347;UBERON:0000062!1.49e-08!511;UBERON:0002148!4.56e-08!2;UBERON:0009662!4.56e-08!2;UBERON:0000922!7.96e-08!612;UBERON:0001870!1.51e-07!2;UBERON:0001876!2.23e-07!2;UBERON:0001897!3.96e-07!2;UBERON:0009663!4.35e-07!7;UBERON:0001875!7.86e-07!2;UBERON:0006514!7.86e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.09e-53;20!UBERON:0002619;1.75e-48;22!UBERON:0000956;1.62e-42;25!UBERON:0000203;1.62e-42;25!UBERON:0003528;1.16e-39;34!UBERON:0002020;1.16e-39;34!UBERON:0000073;9.33e-39;53!UBERON:0002616;9.33e-39;53!UBERON:0001869;2.46e-37;32!UBERON:0004733;7.22e-36;12!UBERON:0002028;7.22e-36;12!UBERON:0001893;1.77e-34;34!UBERON:0002791;1.60e-33;32!UBERON:0004732;5.45e-33;13!UBERON:0002298;3.40e-32;6!UBERON:0001017;1.55e-28;75!UBERON:0000955;1.19e-26;68!UBERON:0002780;3.42e-24;41!UBERON:0001890;3.42e-24;41!UBERON:0001016;4.08e-24;83!UBERON:0002680;5.54e-22;9!UBERON:0001895;5.54e-22;9!UBERON:0000200;9.20e-22;6!UBERON:0001872;1.56e-17;5!UBERON:0000988;3.76e-17;3!UBERON:0001896;7.80e-17;3!UBERON:0005290;7.80e-17;3!UBERON:0001870;3.04e-16;3!UBERON:0001871;3.75e-12;6!UBERON:0002148;5.81e-12;2!UBERON:0006331;5.81e-12;2!UBERON:0009662;5.81e-12;2!UBERON:0002771;1.14e-11;2!UBERON:0007023;1.50e-11;114!UBERON:0002702;1.66e-11;2!UBERON:0002021;2.78e-10;5!UBERON:0011216;5.44e-10;132!UBERON:0002037;3.56e-09;6!UBERON:0002240;3.95e-08;3!UBERON:0005174;3.95e-08;3!UBERON:0001137;3.95e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.34e-73,56;UBERON:0005068,7.34e-73,56;UBERON:0006241,7.34e-73,56;UBERON:0007135,7.34e-73,56;UBERON:0000073,2.05e-66,53;UBERON:0002616,2.05e-66,53;UBERON:0001017,1.47e-63,81;UBERON:0000955,2.20e-62,68;UBERON:0006238,2.20e-62,68;UBERON:0001016,1.01e-56,89;UBERON:0001950,2.45e-53,20;UBERON:0003075,1.05e-51,82;UBERON:0007284,1.05e-51,82;UBERON:0002346,4.79e-49,86;UBERON:0002619,2.03e-48,22;UBERON:0003528,6.28e-45,34;UBERON:0002020,6.28e-45,34;UBERON:0003076,1.74e-42,15;UBERON:0003057,1.74e-42,15;UBERON:0000956,1.84e-42,25;UBERON:0000203,1.84e-42,25;UBERON:0001869,3.78e-42,32;UBERON:0010371,1.37e-39,104;UBERON:0001893,1.58e-39,34;UBERON:0002791,2.81e-37,32;UBERON:0002780,2.32e-36,41;UBERON:0001890,2.32e-36,41;UBERON:0003080,2.32e-36,41;UBERON:0006240,2.32e-36,41;UBERON:0004733,3.88e-36,12;UBERON:0002028,3.88e-36,12;UBERON:0007277,3.88e-36,12;UBERON:0004732,3.07e-33,13;UBERON:0007023,3.78e-33,114;UBERON:0002298,1.48e-32,6;UBERON:0010314,2.90e-32,132;UBERON:0004121,7.16e-29,171;UBERON:0000924,7.16e-29,171;UBERON:0006601,7.16e-29,171;UBERON:0003056,3.80e-26,61;UBERON:0011216,3.22e-22,223;UBERON:0002680,4.17e-22,9;UBERON:0001895,4.17e-22,9;UBERON:0010092,4.17e-22,9;UBERON:0000200,6.65e-22,6;UBERON:0001872,2.34e-17,5;UBERON:0000988,2.44e-17,3;UBERON:0000025,2.92e-17,192;UBERON:0001896,5.22e-17,3;UBERON:0005290,5.22e-17,3;UBERON:0010096,5.22e-17,3;UBERON:0001870,2.60e-16,3;UBERON:0004111,1.31e-12,240;UBERON:0001871,2.59e-12,6;UBERON:0002148,4.19e-12,2;UBERON:0006331,4.19e-12,2;UBERON:0009662,4.19e-12,2;UBERON:0002771,7.23e-12,2;UBERON:0002702,1.46e-11,2;UBERON:0000483,2.07e-10,306;UBERON:0000119,3.01e-10,309;UBERON:0002021,3.48e-10,5;UBERON:0002037,3.57e-09,6;UBERON:0006215,3.57e-09,6;UBERON:0002240,4.25e-08,3;UBERON:0005174,4.25e-08,3;UBERON:0001137,4.25e-08,3 | |||
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|short_description=p2@CDH18 | |||
}} | }} |
Latest revision as of 12:55, 17 September 2015
Short description: | p2@CDH18 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH18_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 169bp_to_ENST00000507632_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data