FFCP PHASE1:Hg19::chr5:180242601..180242624,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:180242601..180242624,- to FFCP PHASE1:Hg19::chr5:180242601..180242624,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4245 | |EntrezGene=4245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7044 | |HGNC=7044 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAK2 | |UniProt=D6RAK2 | ||
|association_with_transcript=-21bp_to_ENST00000514438_5end | |||
|cluster_id=chr5:180242601..180242624,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_MGAT1_5end | |||
|id=chr5:180242601..180242624,- | |||
|ontology_enrichment_celltype=CL:0002009!4.89e-53!65;CL:0002194!1.51e-51!63;CL:0000576!1.51e-51!63;CL:0000040!1.51e-51!63;CL:0000559!1.51e-51!63;CL:0000557!7.10e-48!71;CL:0000839!2.26e-45!70;CL:0000766!3.38e-45!76;CL:0002057!4.04e-45!42;CL:0000860!7.93e-41!45;CL:0000763!5.79e-37!112;CL:0000049!5.79e-37!112;CL:0000738!3.37e-29!140;CL:0002087!1.37e-26!119;CL:0000037!3.07e-24!172;CL:0000566!3.07e-24!172;CL:0002031!4.19e-24!124;CL:0002032!2.72e-22!165;CL:0000837!2.72e-22!165;CL:0000988!2.78e-21!182;CL:0000451!5.61e-10!10;CL:0002393!7.68e-10!9;CL:0002397!7.68e-10!9;CL:0000990!2.50e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.94e-48;33!CL:0002057;5.94e-48;33!CL:0000473;3.82e-47;39!CL:0000234;3.82e-47;39!CL:0000576;2.46e-41;48!CL:0000766;1.70e-28;69!CL:0000763;7.06e-12;100!CL:0000990;1.04e-10;8!CL:0000738;5.70e-10;136!CL:0000235;6.31e-10;6!CL:0002393;7.61e-10;6!CL:0002397;7.61e-10;6!CL:0002087;1.73e-09;104!CL:0000451;1.96e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.25e-76,59;CL:0000576,4.25e-76,59;CL:0000040,4.25e-76,59;CL:0000559,4.25e-76,59;CL:0002009,6.11e-76,61;CL:0000473,3.31e-74,48;CL:0000234,3.31e-74,48;CL:0000557,1.92e-67,67;CL:0000766,2.38e-66,72;CL:0000839,4.72e-66,66;CL:0000860,2.46e-65,42;CL:0002057,2.46e-65,42;CL:0000763,1.29e-44,108;CL:0000049,1.29e-44,108;CL:0000738,2.07e-36,136;CL:0002087,1.80e-35,115;CL:0002031,1.53e-30,120;CL:0000037,1.72e-25,168;CL:0002032,2.88e-24,161;CL:0000837,2.88e-24,161;CL:0000988,3.68e-23,177;CL:0002393,1.21e-13,9;CL:0002397,1.21e-13,9;CL:0000990,1.02e-10,8;CL:0000235,6.38e-10,6;CL:0000451,1.93e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-46;42!CL:0000049;1.65e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.66e-44!102;UBERON:0003061!1.66e-44!102;UBERON:0007023!5.51e-43!115;UBERON:0002193!1.46e-40!112;UBERON:0002371!1.14e-39!80;UBERON:0001474!3.47e-35!86;UBERON:0002405!1.21e-30!115;UBERON:0004765!1.68e-27!101;UBERON:0001434!1.68e-27!101;UBERON:0003081!1.92e-16!216;UBERON:0002204!4.72e-12!167;UBERON:0000062!1.02e-10!511;UBERON:0000479!2.90e-08!787;UBERON:0001049!1.88e-07!57;UBERON:0005068!1.88e-07!57;UBERON:0006241!1.88e-07!57;UBERON:0007135!1.88e-07!57;UBERON:0000467!4.18e-07!625;UBERON:0000480!5.05e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.59e-57,98;UBERON:0003061,2.59e-57,98;UBERON:0002371,3.32e-57,76;UBERON:0002193,2.05e-53,108;UBERON:0002405,4.99e-52,93;UBERON:0001474,1.25e-51,82;UBERON:0004765,2.35e-45,90;UBERON:0001434,2.21e-40,100;UBERON:0003081,1.89e-26,203;UBERON:0002204,7.47e-22,167;UBERON:0007023,4.76e-17,114;UBERON:0000926,1.89e-15,315;UBERON:0004120,1.89e-15,315;UBERON:0006603,1.89e-15,315;UBERON:0000923,2.71e-08,560;UBERON:0010316,2.71e-08,560;UBERON:0005291,2.71e-08,560;UBERON:0006598,2.71e-08,560;UBERON:0010317,2.71e-08,560;UBERON:0002532,2.71e-08,560;UBERON:0002050,4.87e-08,564;UBERON:0005423,2.23e-07,581;UBERON:0000922,4.25e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36162573225888,0,0,0,0,0,0,0,0,0,0,0,0,9.8341069212226,3.83829398097213,11.6112092487057,0,0,0,0,0,0,26.0377842009982,13.6370224279696,11.9355978893719,69.4137970143765,63.807052205739,79.5908503989636,53.6519501096594,68.0176698639857,44.1502991361825,76.2367241050646,130.751388390941,126.669905696097,59.264632818363,61.4785695669842,63.1407553802523,104.457941263195,92.949794436071,124.592367666794,90.5445653199929,121.443236775741,106.96837859586,88.4582448951908,117.139094882774,145.129527556382,30.0164683169912,39.6932678667047,23.8685860298309,95.7690487474327,121.420438083904,112.730827068199,87.1832868440899,68.8357452314666,100.124057409059,64.7777467817705,133.316504227498,121.205094389859,16.6891676186434,35.0797094942322,18.4499608047371,6.73971786878971,10.0618518203809,8.03627933485401,11.9705352371324,8.55341711956087,6.75857368929146,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,5.04457706683382,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.63723844372141,0,0,48.3575616545478,59.5523701563494,43.34429512915,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0041053956808,37.6746866874173,15.7549032026052,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4871341923571,14.0631985600995,14.7583757638122,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,8.19713963110744,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84292754744295,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0,0,0,0,0,0,0,5.17790904272285,0,0,0,0,1.52234282769651,0.764637207142375,2.27858874869665,0.714695326373367,1.23408681925858,0.648473311192717,1.08006287447623,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0.1605880751037,0,0.851692475380653,0.343505344755765,0.614481528616916,0.447352215784832,0.667396566847634,0.19538809540204,0,0,0.270455678475983,0,0,0,12.0136707002953,0,0,0,0.23874448473769,0.296964680832639,0,0,0.844016498463076,0,0,0,4.98119970627674,2.21027132424918,0,0,0,0,0,0,0,5.72131752694215,0,0,0,0.74214478529481,0,0,0,6.52499617891314,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.442317039724898,0,3.07139556015562,0,0,1.07730361905316,0,0,0,0,0.957003479195758,0.549585560411174,7.99552164027952,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.56526937059684,1.83309043480088,0,0,0,0.539209063845416,0,0,0,0,0,0.789168805698781,0,0,11.6263306516418,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,1.74580229679155,0,1.12990370390266,0,0,0.189932387867636,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,1.95497680890578,0.229160424011684,2.87149209830726,1.79711100449092,0.858452096273142,2.00854311697685,1.88113722962834,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,10.798746794472,0.77380195455795,0.182248669974074,0,0.551639951094387,1.15400093896996,0,0,0,7.14695326373367,3.31045985182716,0,0,0.864221491201268,0,0,0,0,0,1.02586563574658,2.65013777824443,0.646414781807753,0.79339561045614,0,0,9.18371748082174,2.35806457649499,4.97086866416635,3.96932817449561,0,0,0,4.89616023032527,3.7603484103405,3.982492497925,2.62298104567844,0,0,0.244052529803926,1.1267183763585,2.29363678276028,1.55300672151593,1.24192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,31.9570906496597,13.2864840313363,29.1146401775403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.798169295285756,0,0,0,1.29180516505481,0,0,0,0,0,0,0,0,2.40673050717623,0,0.781514011233092,0,0,0,0.405225507710368,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,2.35398605553177,1.82089681270989,1.13831095675649,0.709618961301111,0,0,0.203909198930495,0.0657727735628491,0,0,3.3752029925721,0.314231179832004,0,0.913158720509496,0,0,2.07281978112303,0,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,1.94228651156368,1.7452677165562,0,0.485710993059139,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,1.22574160876953,0,3.72986087518396,9.80253121079384,0.4226557275834,0,2.06764619555678,3.41626806259959,0,0,0,0,0.730336388246517,0.917458566809082,1.57673541466596,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,3.18270532516606,0.267964130156178,0.829169439458779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| ||
|short_description=p6@MGAT1 | |||
}} | }} |
Latest revision as of 11:09, 17 September 2015
Short description: | p6@MGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MGAT1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -21bp_to_ENST00000514438_5end |
EntrezGene: | MGAT1 |
HGNC: | 7044 |
UniProt: | D6RAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.25e-76 | 59 |
monocyte | 4.25e-76 | 59 |
monoblast | 4.25e-76 | 59 |
promonocyte | 4.25e-76 | 59 |
macrophage dendritic cell progenitor | 6.11e-76 | 61 |
defensive cell | 3.31e-74 | 48 |
phagocyte | 3.31e-74 | 48 |
granulocyte monocyte progenitor cell | 1.92e-67 | 67 |
myeloid leukocyte | 2.38e-66 | 72 |
myeloid lineage restricted progenitor cell | 4.72e-66 | 66 |
classical monocyte | 2.46e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.46e-65 | 42 |
myeloid cell | 1.29e-44 | 108 |
common myeloid progenitor | 1.29e-44 | 108 |
leukocyte | 2.07e-36 | 136 |
nongranular leukocyte | 1.80e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 1.53e-30 | 120 |
hematopoietic stem cell | 1.72e-25 | 168 |
hematopoietic oligopotent progenitor cell | 2.88e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.88e-24 | 161 |
hematopoietic cell | 3.68e-23 | 177 |
intermediate monocyte | 1.21e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.21e-13 | 9 |
conventional dendritic cell | 1.02e-10 | 8 |
macrophage | 6.38e-10 | 6 |
dendritic cell | 1.93e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.59e-57 | 98 |
blood island | 2.59e-57 | 98 |
bone marrow | 3.32e-57 | 76 |
hemolymphoid system | 2.05e-53 | 108 |
immune system | 4.99e-52 | 93 |
bone element | 1.25e-51 | 82 |
skeletal element | 2.35e-45 | 90 |
skeletal system | 2.21e-40 | 100 |
lateral plate mesoderm | 1.89e-26 | 203 |
musculoskeletal system | 7.47e-22 | 167 |
adult organism | 4.76e-17 | 114 |
mesoderm | 1.89e-15 | 315 |
mesoderm-derived structure | 1.89e-15 | 315 |
presumptive mesoderm | 1.89e-15 | 315 |
germ layer | 2.71e-08 | 560 |
germ layer / neural crest | 2.71e-08 | 560 |
embryonic tissue | 2.71e-08 | 560 |
presumptive structure | 2.71e-08 | 560 |
germ layer / neural crest derived structure | 2.71e-08 | 560 |
epiblast (generic) | 2.71e-08 | 560 |
embryonic structure | 4.87e-08 | 564 |
developing anatomical structure | 2.23e-07 | 581 |
embryo | 4.25e-07 | 592 |