FFCP PHASE1:Hg19::chr5:172229862..172229865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:172229862..172229865,+ to FFCP PHASE1:Hg19::chr5:172229862..172229865,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:172229862..172229865,+ | |||
|description=CAGE_peak_at_chr5:172229862..172229865,+ | |||
|id=chr5:172229862..172229865,+ | |||
|ontology_enrichment_celltype=CL:0000359!5.74e-16!32;CL:0000192!1.57e-12!42;CL:0000514!1.57e-12!42;CL:0002539!1.83e-10!10;CL:0000680!3.78e-10!57;CL:0000056!3.78e-10!57;CL:0000355!3.78e-10!57;CL:0000187!1.08e-09!54;CL:0000048!1.99e-09!430;CL:0000723!4.77e-09!436;CL:0002594!1.15e-08!4;CL:0000034!1.47e-08!444;CL:0000183!1.89e-08!59;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.97e-18;2!CL:0000558;1.97e-18;2!CL:0000359;4.71e-18;32!CL:0002539;1.38e-13;10!CL:0000192;4.57e-13;43!CL:0002592;3.77e-12;3!CL:0000136;1.96e-10;13!CL:0000319;7.18e-10;1!CL:0002581;1.99e-09;1!CL:0002379;1.99e-09;1!CL:0002595;1.45e-07;5!CL:0000187;1.71e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.18e-19,32;CL:0000764,1.89e-18,2;CL:0000765,1.89e-18,2;CL:0000050,1.89e-18,2;CL:0000038,1.89e-18,2;CL:0000558,1.89e-18,2;CL:0000547,1.89e-18,2;CL:0000549,1.89e-18,2;CL:0000550,1.89e-18,2;CL:0000552,1.89e-18,2;CL:0000192,2.67e-14,43;CL:0000514,2.67e-14,43;CL:0002539,1.41e-13,10;CL:0000680,1.01e-12,58;CL:0000056,1.01e-12,58;CL:0000355,1.01e-12,58;CL:0002592,3.77e-12,3;CL:0000187,6.73e-11,55;CL:0000319,8.91e-10,1;CL:0000393,1.07e-09,61;CL:0000211,1.07e-09,61;CL:0002379,1.62e-09,1;CL:0002581,2.08e-09,1;CL:0000136,4.22e-09,15;CL:0000222,7.07e-08,121;CL:0002595,1.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;4.57e-13;43!CL:0000355;4.10e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;7.18e-10;1!DOID:3620;1.99e-09;1!DOID:3565;1.99e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.91e-10,1;DOID:3620,1.62e-09,1;DOID:3565,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.91e-14!42;UBERON:0003509!3.91e-14!42;UBERON:0004572!3.91e-14!42;UBERON:0004573!8.71e-12!33;UBERON:0004571!8.71e-12!33;UBERON:0004237!1.83e-10!10;UBERON:0004695!1.83e-10!10;UBERON:0002111!1.83e-10!10;UBERON:0004178!1.83e-10!10;UBERON:0004290!3.45e-10!70;UBERON:0001134!3.91e-09!61;UBERON:0002036!3.91e-09!61;UBERON:0003082!3.91e-09!61;UBERON:0000486!1.09e-08!82;UBERON:0002385!1.12e-08!63;UBERON:0001015!1.12e-08!63;UBERON:0000383!1.12e-08!63;UBERON:0001310!1.15e-08!4;UBERON:0000914!1.53e-08!83;UBERON:0002329!1.53e-08!83;UBERON:0003077!1.53e-08!83;UBERON:0003059!1.53e-08!83;UBERON:0007282!1.53e-08!83;UBERON:0009618!1.53e-08!83;UBERON:0007285!1.53e-08!83;UBERON:0001981!2.43e-08!60;UBERON:0007500!2.43e-08!60;UBERON:0004537!2.43e-08!60;UBERON:0006965!2.43e-08!60;UBERON:0004872!3.72e-08!84;UBERON:0000055!1.52e-07!69;UBERON:0000947!5.07e-07!21;UBERON:0010191!5.07e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.78e-19;33!UBERON:0004571;1.78e-19;33!UBERON:0001637;3.40e-15;42!UBERON:0003509;3.40e-15;42!UBERON:0004572;3.40e-15;42!UBERON:0004237;1.38e-13;10!UBERON:0004695;1.38e-13;10!UBERON:0002111;1.38e-13;10!UBERON:0004178;1.38e-13;10!UBERON:0003498;3.77e-12;3!UBERON:0005985;3.77e-12;3!UBERON:0001621;3.77e-12;3!UBERON:0000947;8.42e-10;21!UBERON:0010191;8.42e-10;21!UBERON:0001135;4.08e-09;15!UBERON:0007500;6.80e-09;56!UBERON:0001981;6.80e-09;56!UBERON:0004537;6.80e-09;56!UBERON:0003834;1.45e-07;5!UBERON:0001533;1.45e-07;5!UBERON:0002385;8.36e-07;31!UBERON:0001015;8.36e-07;31!UBERON:0000383;8.36e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.69e-23,33;UBERON:0004571,1.69e-23,33;UBERON:0001637,3.87e-18,42;UBERON:0003509,3.87e-18,42;UBERON:0004572,3.87e-18,42;UBERON:0004237,1.41e-13,10;UBERON:0004695,1.41e-13,10;UBERON:0002111,1.41e-13,10;UBERON:0004178,1.41e-13,10;UBERON:0007500,1.81e-12,59;UBERON:0001981,1.81e-12,59;UBERON:0004537,1.81e-12,59;UBERON:0006965,1.81e-12,59;UBERON:0001621,3.77e-12,3;UBERON:0001134,8.39e-12,62;UBERON:0002036,8.39e-12,62;UBERON:0003082,8.39e-12,62;UBERON:0002385,2.19e-11,64;UBERON:0001015,2.19e-11,64;UBERON:0000383,2.19e-11,64;UBERON:0000055,1.29e-10,68;UBERON:0002329,4.14e-10,71;UBERON:0003059,4.14e-10,71;UBERON:0007282,4.14e-10,71;UBERON:0004290,4.14e-10,71;UBERON:0009618,4.14e-10,71;UBERON:0003077,6.00e-10,72;UBERON:0007285,6.00e-10,72;UBERON:0007524,8.63e-10,73;UBERON:0000947,8.66e-10,21;UBERON:0010191,8.66e-10,21;UBERON:0001135,4.13e-09,15;UBERON:0007503,4.60e-09,78;UBERON:0002049,4.69e-09,78;UBERON:0007798,4.69e-09,78;UBERON:0000486,2.01e-08,83;UBERON:0004872,2.04e-08,83;UBERON:0003498,1.23e-07,5;UBERON:0005985,1.23e-07,5;UBERON:0003834,1.41e-07,5;UBERON:0001533,1.41e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,2.52687949370732,0,0.737201809504527,0,0,0,0,0,0,0.602694528023977,3.65155045193687,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0,0.408308342509787,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,5.72734816413214,0.871533458600294,3.69900067373611,0,0,0,0,0,0,2.60606352001643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11261543589958,6.79732172664741,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,2.12922412126809,3.47973196830029,0,1.14499909393593,0,0,0,0,0,0,0,0,0,0,1.61745985258653,6.34041284692033,0,0,0.487426979262569,0,0,0,0,0,1.32687795048244,3.94605796728386,0.578775534266688,0,0.811641507850816,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0.410462603746695,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,2.72008901684737,0,3.67614692116154,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0.265841714557995,0,0.300515217994437,13.7089876380766,0,0,0.214821114084977,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,3.44082072255207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,2.52687949370732,0,0.737201809504527,0,0,0,0,0,0,0.602694528023977,3.65155045193687,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0,0.408308342509787,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,5.72734816413214,0.871533458600294,3.69900067373611,0,0,0,0,0,0,2.60606352001643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11261543589958,6.79732172664741,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,2.12922412126809,3.47973196830029,0,1.14499909393593,0,0,0,0,0,0,0,0,0,0,1.61745985258653,6.34041284692033,0,0,0.487426979262569,0,0,0,0,0,1.32687795048244,3.94605796728386,0.578775534266688,0,0.811641507850816,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0.410462603746695,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,2.72008901684737,0,3.67614692116154,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0.265841714557995,0,0.300515217994437,13.7089876380766,0,0,0.214821114084977,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,3.44082072255207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:172229862..172229865,+ | |||
}} | }} |
Latest revision as of 13:10, 30 July 2015
Short description: | p@chr5:172229862..172229865, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:172229862..172229865, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.18e-19 | 32 |
erythroid lineage cell | 1.89e-18 | 2 |
erythroblast | 1.89e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.89e-18 | 2 |
erythroid progenitor cell | 1.89e-18 | 2 |
reticulocyte | 1.89e-18 | 2 |
proerythroblast | 1.89e-18 | 2 |
basophilic erythroblast | 1.89e-18 | 2 |
polychromatophilic erythroblast | 1.89e-18 | 2 |
orthochromatic erythroblast | 1.89e-18 | 2 |
smooth muscle cell | 2.67e-14 | 43 |
smooth muscle myoblast | 2.67e-14 | 43 |
aortic smooth muscle cell | 1.41e-13 | 10 |
muscle precursor cell | 1.01e-12 | 58 |
myoblast | 1.01e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-12 | 58 |
smooth muscle cell of the coronary artery | 3.77e-12 | 3 |
muscle cell | 6.73e-11 | 55 |
mucus secreting cell | 8.91e-10 | 1 |
electrically responsive cell | 1.07e-09 | 61 |
electrically active cell | 1.07e-09 | 61 |
meningothelial cell | 1.62e-09 | 1 |
perirenal preadipocyte | 2.08e-09 | 1 |
fat cell | 4.22e-09 | 15 |
mesodermal cell | 7.07e-08 | 121 |
smooth muscle cell of the subclavian artery | 1.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.91e-10 | 1 |
central nervous system cancer | 1.62e-09 | 1 |
meningioma | 1.62e-09 | 1 |