FFCP PHASE1:Hg19::chr4:74608336..74608386,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:74608336..74608386,+ to FFCP PHASE1:Hg19::chr4:74608336..74608386,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3576 | |EntrezGene=3576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6025 | |HGNC=6025 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-468bp_to_AJ227913_5end | |||
|cluster_id=chr4:74608336..74608386,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_IL8_5end | |||
|id=chr4:74608336..74608386,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-36!42;CL:0000766!3.20e-36!76;CL:0000860!3.91e-33!45;CL:0002009!3.32e-30!65;CL:0000557!6.65e-29!71;CL:0002194!2.09e-28!63;CL:0000576!2.09e-28!63;CL:0000040!2.09e-28!63;CL:0000559!2.09e-28!63;CL:0000839!1.52e-26!70;CL:0000763!2.02e-23!112;CL:0000049!2.02e-23!112;CL:0000738!6.52e-20!140;CL:0000048!3.49e-16!430;CL:0000359!4.32e-16!32;CL:0000723!6.28e-16!436;CL:0000034!1.34e-15!444;CL:0000037!8.98e-14!172;CL:0000566!8.98e-14!172;CL:0002087!4.18e-13!119;CL:0000988!1.40e-12!182;CL:0002031!1.56e-12!124;CL:0002032!2.31e-12!165;CL:0000837!2.31e-12!165;CL:0000192!1.49e-11!42;CL:0000514!1.49e-11!42;CL:0000680!3.46e-11!57;CL:0000056!3.46e-11!57;CL:0000355!3.46e-11!57;CL:0000094!4.44e-11!8;CL:0002371!1.42e-10!591;CL:0000012!1.28e-09!682;CL:0000187!1.60e-09!54;CL:0002539!2.24e-09!10;CL:0000548!2.65e-09!679;CL:0000004!2.65e-09!679;CL:0000255!2.65e-09!679;CL:0000183!7.56e-09!59;CL:0000144!2.46e-08!625;CL:0000393!8.34e-08!60;CL:0000211!8.34e-08!60;CL:0000003!1.71e-07!722;CL:0000081!1.88e-07!11;CL:0000134!4.21e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-41;33!CL:0002057;3.68e-41;33!CL:0000473;3.93e-30;39!CL:0000234;3.93e-30;39!CL:0000359;1.96e-23;32!CL:0000576;3.83e-23;48!CL:0000094;1.70e-21;8!CL:0000766;6.16e-21;69!CL:0000081;3.23e-15;11!CL:0000192;8.63e-13;43!CL:0002539;4.04e-12;10!CL:0000775;1.12e-09;3!CL:0000763;4.90e-09;100!CL:0000767;3.39e-08;3!CL:0002592;3.62e-08;3!CL:0000771;4.71e-07;2!CL:0002087;6.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.20e-44,72;CL:0000860,6.84e-44,42;CL:0002057,6.84e-44,42;CL:0000473,3.84e-40,48;CL:0000234,3.84e-40,48;CL:0002009,1.03e-33,61;CL:0002194,9.82e-33,59;CL:0000576,9.82e-33,59;CL:0000040,9.82e-33,59;CL:0000559,9.82e-33,59;CL:0000557,5.72e-30,67;CL:0000839,1.97e-28,66;CL:0000763,9.19e-28,108;CL:0000049,9.19e-28,108;CL:0000359,5.21e-25,32;CL:0000738,1.62e-22,136;CL:0000094,1.73e-21,8;CL:0000048,1.23e-19,427;CL:0000034,2.18e-19,441;CL:0000723,3.87e-19,433;CL:0000192,2.52e-17,43;CL:0000514,2.52e-17,43;CL:0000037,3.14e-16,168;CL:0002032,2.65e-15,161;CL:0000837,2.65e-15,161;CL:0002087,3.16e-15,115;CL:0000081,3.27e-15,11;CL:0000988,7.01e-15,177;CL:0002031,3.34e-13,120;CL:0000680,5.55e-13,58;CL:0000056,5.55e-13,58;CL:0000355,5.55e-13,58;CL:0000187,1.73e-12,55;CL:0002539,4.54e-12,10;CL:0000393,8.41e-11,61;CL:0000211,8.41e-11,61;CL:0000775,1.12e-09,3;CL:0000767,3.44e-08,3;CL:0002592,3.91e-08,3;CL:0000134,1.15e-07,354;CL:0002320,2.70e-07,361;CL:0000771,4.71e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-32;42!CL:0000514;8.63e-13;43!CL:0000049;2.96e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.20e-27!167;UBERON:0003081!2.01e-24!216;UBERON:0002371!8.49e-24!80;UBERON:0001474!5.14e-21!86;UBERON:0002390!5.40e-20!102;UBERON:0003061!5.40e-20!102;UBERON:0002193!8.10e-20!112;UBERON:0004765!3.07e-18!101;UBERON:0001434!3.07e-18!101;UBERON:0002405!8.71e-17!115;UBERON:0001637!1.24e-13!42;UBERON:0003509!1.24e-13!42;UBERON:0004572!1.24e-13!42;UBERON:0004573!3.89e-13!33;UBERON:0004571!3.89e-13!33;UBERON:0000926!3.50e-11!448;UBERON:0004120!3.50e-11!448;UBERON:0006603!3.50e-11!448;UBERON:0001134!7.14e-10!61;UBERON:0002036!7.14e-10!61;UBERON:0003082!7.14e-10!61;UBERON:0000055!9.94e-10!69;UBERON:0004535!1.01e-09!110;UBERON:0001981!1.63e-09!60;UBERON:0007500!1.63e-09!60;UBERON:0004537!1.63e-09!60;UBERON:0006965!1.63e-09!60;UBERON:0004872!1.99e-09!84;UBERON:0004237!2.24e-09!10;UBERON:0004695!2.24e-09!10;UBERON:0002111!2.24e-09!10;UBERON:0004178!2.24e-09!10;UBERON:0002385!2.76e-09!63;UBERON:0001015!2.76e-09!63;UBERON:0000383!2.76e-09!63;UBERON:0001009!3.84e-09!113;UBERON:0002049!1.33e-08!79;UBERON:0007798!1.33e-08!79;UBERON:0004290!2.67e-08!70;UBERON:0000486!3.54e-08!82;UBERON:0000914!1.95e-07!83;UBERON:0002329!1.95e-07!83;UBERON:0003077!1.95e-07!83;UBERON:0003059!1.95e-07!83;UBERON:0007282!1.95e-07!83;UBERON:0009618!1.95e-07!83;UBERON:0007285!1.95e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.43e-16;33!UBERON:0004571;9.43e-16;33!UBERON:0004237;4.04e-12;10!UBERON:0004695;4.04e-12;10!UBERON:0002111;4.04e-12;10!UBERON:0004178;4.04e-12;10!UBERON:0001637;6.49e-12;42!UBERON:0003509;6.49e-12;42!UBERON:0004572;6.49e-12;42!UBERON:0003498;3.62e-08;3!UBERON:0005985;3.62e-08;3!UBERON:0001621;3.62e-08;3!UBERON:0001135;9.91e-08;15!UBERON:0000055;2.18e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.69e-29,167;UBERON:0003081,3.29e-26,203;UBERON:0002371,1.85e-25,76;UBERON:0002405,3.99e-24,93;UBERON:0001474,5.30e-23,82;UBERON:0002193,2.39e-22,108;UBERON:0002390,9.88e-21,98;UBERON:0003061,9.88e-21,98;UBERON:0004765,3.07e-20,90;UBERON:0001637,7.44e-18,42;UBERON:0003509,7.44e-18,42;UBERON:0004572,7.44e-18,42;UBERON:0001434,2.05e-17,100;UBERON:0000926,5.02e-17,315;UBERON:0004120,5.02e-17,315;UBERON:0006603,5.02e-17,315;UBERON:0004573,1.10e-16,33;UBERON:0004571,1.10e-16,33;UBERON:0000055,4.70e-13,68;UBERON:0004237,4.54e-12,10;UBERON:0004695,4.54e-12,10;UBERON:0002111,4.54e-12,10;UBERON:0004178,4.54e-12,10;UBERON:0001134,8.00e-12,62;UBERON:0002036,8.00e-12,62;UBERON:0003082,8.00e-12,62;UBERON:0007500,2.52e-11,59;UBERON:0001981,2.52e-11,59;UBERON:0004537,2.52e-11,59;UBERON:0006965,2.52e-11,59;UBERON:0002385,2.67e-11,64;UBERON:0001015,2.67e-11,64;UBERON:0000383,2.67e-11,64;UBERON:0002329,7.37e-11,71;UBERON:0003059,7.37e-11,71;UBERON:0007282,7.37e-11,71;UBERON:0004290,7.37e-11,71;UBERON:0009618,7.37e-11,71;UBERON:0002049,1.11e-10,78;UBERON:0007798,1.11e-10,78;UBERON:0003077,1.23e-10,72;UBERON:0007285,1.23e-10,72;UBERON:0007524,2.02e-10,73;UBERON:0004535,2.06e-10,109;UBERON:0001009,5.83e-10,112;UBERON:0004872,1.19e-09,83;UBERON:0007503,1.97e-09,78;UBERON:0000486,1.44e-08,83;UBERON:0001621,3.91e-08,3;UBERON:0001135,1.07e-07,15;UBERON:0002384,8.60e-07,371 | |||
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| ||
|short_description=p4@IL8 | |||
}} | }} |
Latest revision as of 14:18, 18 September 2015
Short description: | p4@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -468bp_to_AJ227913_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data