FFCP PHASE1:Hg19::chr4:19458597..19458623,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:19458597..19458623,- to FFCP PHASE1:Hg19::chr4:19458597..19458623,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505347_5end | |||
|cluster_id=chr4:19458597..19458623,- | |||
|description=CAGE_peak_1_at_ENST00000505347_5end | |||
|id=chr4:19458597..19458623,- | |||
|ontology_enrichment_celltype=CL:0002149!8.14e-11!6;CL:0002255!8.14e-11!6;CL:0000159!1.12e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002573;9.70e-15;2!CL:0000319;3.63e-11;1!CL:0002149;1.80e-07;6!CL:0002255;1.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,9.39e-15,2;CL:0000319,2.18e-11,1;CL:0002149,1.52e-07,6;CL:0002255,1.52e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.58e-22!239;DOID:0050687!7.92e-22!143;DOID:162!9.63e-20!235;DOID:305!1.49e-18!106;DOID:299!5.44e-14!25;DOID:0050686!2.71e-11!137;DOID:3001!8.14e-11!6;DOID:5409!2.02e-09!4;DOID:154!2.59e-09!2;DOID:4236!2.59e-09!2;DOID:1325!2.59e-09!7;DOID:3904!2.59e-09!7;DOID:4468!5.98e-09!2;DOID:0050615!3.07e-08!16;DOID:120!5.26e-08!27;DOID:193!2.30e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:154;4.94e-21;2!DOID:4236;4.94e-21;2!DOID:299;4.79e-14;25!DOID:1325;1.56e-13;7!DOID:3904;1.56e-13;7!DOID:0060085;3.63e-11;1!DOID:3165;3.63e-11;1!DOID:0060121;3.63e-11;1!DOID:2438;3.63e-11;1!DOID:3030;3.63e-11;1!DOID:4418;3.63e-11;1!DOID:5409;5.30e-11;4!DOID:3001;1.80e-07;6!DOID:0050687;4.85e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.20e-21,2;DOID:4236,5.20e-21,2;DOID:0050687,1.91e-15,143;DOID:299,3.94e-14,25;DOID:305,5.75e-14,106;DOID:14566,6.23e-14,239;DOID:1325,1.74e-13,7;DOID:3904,1.74e-13,7;DOID:3030,2.18e-11,1;DOID:0060085,3.63e-11,1;DOID:3165,3.63e-11,1;DOID:0060121,3.63e-11,1;DOID:2438,3.63e-11,1;DOID:4418,3.63e-11,1;DOID:162,4.66e-11,235;DOID:5409,6.33e-11,4;DOID:3001,1.52e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003134!8.35e-07!37;UBERON:0000474!8.35e-07!37 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,7.16027078322129,0.557216921387392,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12748913591143,0,0,3.99337488346572,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0.448788222048861,1.73835795075213,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.10998064528027,0.489698424477443,0,3.02944095638928,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.554698692052555,1.73559738335131,0,0,0,0,0,0,0,0,0,0,0.137041924646751,1.58971689362392,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0.543616824294456,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,1.47305718976163,0,0,0,0,0.342173675768659,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,1.96618327002975,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0.827356886187777,1.77970243027311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78662402337809,4.00503002368041,0,1.8328549483524,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,1.16969731731053,0,1.18920090777569,0,0.109940516745429,3.77407108916684,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,2.02717601618299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,1.06727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,7.16027078322129,0.557216921387392,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12748913591143,0,0,3.99337488346572,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0.448788222048861,1.73835795075213,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.10998064528027,0.489698424477443,0,3.02944095638928,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.554698692052555,1.73559738335131,0,0,0,0,0,0,0,0,0,0,0.137041924646751,1.58971689362392,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0.543616824294456,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,1.47305718976163,0,0,0,0,0.342173675768659,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,1.96618327002975,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0.827356886187777,1.77970243027311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78662402337809,4.00503002368041,0,1.8328549483524,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,1.16969731731053,0,1.18920090777569,0,0.109940516745429,3.77407108916684,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,2.02717601618299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,1.06727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000505347 | |||
}} | }} |
Latest revision as of 04:15, 30 July 2015
Short description: | p1@ENST00000505347 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000505347_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505347_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 9.39e-15 | 2 |
mucus secreting cell | 2.18e-11 | 1 |
epithelial cell of uterus | 1.52e-07 | 6 |
stromal cell of endometrium | 1.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.20e-21 | 2 |
carcinosarcoma | 5.20e-21 | 2 |
cell type cancer | 1.91e-15 | 143 |
adenocarcinoma | 3.94e-14 | 25 |
carcinoma | 5.75e-14 | 106 |
disease of cellular proliferation | 6.23e-14 | 239 |
bronchus cancer | 1.74e-13 | 7 |
bronchogenic carcinoma | 1.74e-13 | 7 |
mucinous adenocarcinoma | 2.18e-11 | 1 |
organ system benign neoplasm | 3.63e-11 | 1 |
skin benign neoplasm | 3.63e-11 | 1 |
integumentary system benign neoplasm | 3.63e-11 | 1 |
dermis tumor | 3.63e-11 | 1 |
cutaneous fibrous histiocytoma | 3.63e-11 | 1 |
cancer | 4.66e-11 | 235 |
lung small cell carcinoma | 6.33e-11 | 4 |
female reproductive endometrioid cancer | 1.52e-07 | 6 |