FFCP PHASE1:Hg19::chr4:152330355..152330373,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:152330355..152330373,+ to FFCP PHASE1:Hg19::chr4:152330355..152330373,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729830 | |EntrezGene=729830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34237 | |HGNC=34237 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508198_5end | |||
|cluster_id=chr4:152330355..152330373,+ | |||
|coexpression_cluster_id=C2780 | |||
|description=CAGE_peak_2_at_FAM160A1_5end | |||
|id=chr4:152330355..152330373,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.91e-16!254;CL:0002076!1.77e-11!43;CL:0000223!5.03e-10!59;CL:0002251!1.40e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.18e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.59e-10,253;CL:0002076,2.63e-09,42;CL:0000223,4.22e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.81e-23!106;DOID:0050687!1.53e-15!143;DOID:1749!3.67e-09!14;DOID:299!3.86e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.30e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.01e-15,106;DOID:1749,7.62e-12,14;DOID:0050687,4.32e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.65e-17!169;UBERON:0000925!4.65e-17!169;UBERON:0006595!4.65e-17!169;UBERON:0001007!2.66e-14!155;UBERON:0001555!2.66e-14!155;UBERON:0007026!2.66e-14!155;UBERON:0004921!1.51e-11!129;UBERON:0004185!1.51e-11!129;UBERON:0000077!4.25e-11!130;UBERON:0001004!2.48e-10!72;UBERON:0000062!1.05e-09!511;UBERON:0005911!7.89e-08!82;UBERON:0001041!1.21e-07!98;UBERON:0007023!1.97e-07!115;UBERON:0000161!4.45e-07!35;UBERON:0000065!4.98e-07!53;UBERON:0001048!6.46e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;5.48e-07;11!UBERON:0004921;9.34e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.29e-12,160;UBERON:0000925,7.29e-12,160;UBERON:0006595,7.29e-12,160;UBERON:0001007,1.20e-11,145;UBERON:0001555,1.20e-11,145;UBERON:0007026,1.20e-11,145;UBERON:0004921,3.09e-10,118;UBERON:0001004,1.44e-08,74;UBERON:0007023,6.65e-08,114;UBERON:0000161,6.87e-08,36;UBERON:0001041,1.97e-07,87;UBERON:0003135,6.27e-07,11;UBERON:0000166,8.99e-07,22 | |||
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| ||
|short_description=p2@FAM160A1 | |||
}} | }} |
Latest revision as of 02:44, 16 September 2015
Short description: | p2@FAM160A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM160A1_5end |
Coexpression cluster: | C2780_immature_Dendritic_skeletal_renal_tongue_pancreas_amniotic |
Association with transcript: | 0bp_to_ENST00000508198_5end |
EntrezGene: | FAM160A1 |
HGNC: | 34237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.59e-10 | 253 |
endo-epithelial cell | 2.63e-09 | 42 |
endodermal cell | 4.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.29e-12 | 160 |
endoderm | 7.29e-12 | 160 |
presumptive endoderm | 7.29e-12 | 160 |
digestive system | 1.20e-11 | 145 |
digestive tract | 1.20e-11 | 145 |
primitive gut | 1.20e-11 | 145 |
subdivision of digestive tract | 3.09e-10 | 118 |
respiratory system | 1.44e-08 | 74 |
adult organism | 6.65e-08 | 114 |
orifice | 6.87e-08 | 36 |
foregut | 1.97e-07 | 87 |
male reproductive organ | 6.27e-07 | 11 |
oral opening | 8.99e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.01e-15 | 106 |
squamous cell carcinoma | 7.62e-12 | 14 |
cell type cancer | 4.32e-09 | 143 |