FFCP PHASE1:Hg19::chr4:143369478..143369483,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:143369478..143369483,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr4:143369478..143369483,- | |||
|id=chr4:143369478..143369483,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.74e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.74e-12,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;3.61e-34;2!DOID:5093;8.69e-18;4!DOID:1612;8.69e-18;4!DOID:299;1.03e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.61e-34,2;DOID:5093,8.69e-18,4;DOID:1612,8.69e-18,4;DOID:299,1.03e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-21!115;UBERON:0001049!7.71e-11!57;UBERON:0005068!7.71e-11!57;UBERON:0006241!7.71e-11!57;UBERON:0007135!7.71e-11!57;UBERON:0002616!2.59e-10!59;UBERON:0002020!8.93e-10!34;UBERON:0003528!8.93e-10!34;UBERON:0001017!9.80e-10!82;UBERON:0001893!2.16e-09!34;UBERON:0002308!4.74e-09!9;UBERON:0000125!4.74e-09!9;UBERON:0005743!5.02e-09!86;UBERON:0002294!5.89e-09!7;UBERON:0001173!5.89e-09!7;UBERON:0004912!5.89e-09!7;UBERON:0000955!6.21e-09!69;UBERON:0006238!6.21e-09!69;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0002346!1.73e-08!90;UBERON:0002791!2.20e-08!33;UBERON:0003080!2.65e-08!42;UBERON:0003075!3.19e-08!86;UBERON:0007284!3.19e-08!86;UBERON:0006331!3.82e-08!3;UBERON:0000073!1.17e-07!94;UBERON:0001016!1.17e-07!94;UBERON:0002298!1.26e-07!8;UBERON:0001869!2.51e-07!32;UBERON:0002394!9.58e-07!4;UBERON:0003928!9.58e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.23e-66;1!UBERON:0003703;1.23e-66;1!UBERON:0001174;1.23e-66;1!UBERON:0004914;1.23e-66;1!UBERON:0002114;2.62e-23;2!UBERON:0002394;7.35e-18;4!UBERON:0003928;7.35e-18;4!UBERON:0002108;1.40e-14;4!UBERON:0002294;8.16e-11;7!UBERON:0001173;8.16e-11;7!UBERON:0000058;5.73e-08;10!UBERON:0000310;6.13e-08;10!UBERON:0001443;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.23e-66,1;UBERON:0003703,1.23e-66,1;UBERON:0001174,1.23e-66,1;UBERON:0004914,1.23e-66,1;UBERON:0002114,2.62e-23,2;UBERON:0002108,1.40e-14,4;UBERON:0002394,2.19e-12,6;UBERON:0003928,2.19e-12,6;UBERON:0002294,1.04e-08,9;UBERON:0001173,1.04e-08,9;UBERON:0004912,1.04e-08,9;UBERON:0000310,6.13e-08,10;UBERON:0001443,2.47e-07,11 | |||
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| ||
|short_description=p@chr4:143369478..143369483,- | |||
}} | }} |
Latest revision as of 01:54, 30 July 2015
Short description: | p@chr4:143369478..143369483, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:143369478..143369483, - |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.23e-66 | 1 |
extrahepatic bile duct | 1.23e-66 | 1 |
common bile duct | 1.23e-66 | 1 |
duodenal papilla | 1.23e-66 | 1 |
duodenum | 2.62e-23 | 2 |
small intestine | 1.40e-14 | 4 |
bile duct | 2.19e-12 | 6 |
digestive system duct | 2.19e-12 | 6 |
biliary system | 1.04e-08 | 9 |
biliary tree | 1.04e-08 | 9 |
biliary bud | 1.04e-08 | 9 |
breast | 6.13e-08 | 10 |
chest | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.61e-34 | 2 |
thoracic cancer | 8.69e-18 | 4 |
breast cancer | 8.69e-18 | 4 |
adenocarcinoma | 1.03e-11 | 25 |