FFCP PHASE1:Hg19::chr4:139163521..139163536,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:139163521..139163536,- to FFCP PHASE1:Hg19::chr4:139163521..139163536,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23657 | |EntrezGene=23657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11059 | |HGNC=11059 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPY5,A8K2U4 | |UniProt=Q9UPY5,A8K2U4 | ||
|association_with_transcript=-18bp_to_ENST00000280612,NM_014331,uc011chb.1_5end | |||
|cluster_id=chr4:139163521..139163536,- | |||
|coexpression_cluster_id=C4372 | |||
|description=CAGE_peak_2_at_SLC7A11_5end | |||
|id=chr4:139163521..139163536,- | |||
|ontology_enrichment_celltype=CL:0000548!1.31e-09!679;CL:0000004!1.31e-09!679;CL:0000255!1.31e-09!679;CL:0000860!1.64e-09!45;CL:0000012!5.63e-09!682;CL:0002057!2.00e-08!42;CL:0000063!7.68e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.58e-16;33!CL:0002057;4.58e-16;33!CL:0000473;8.88e-10;39!CL:0000234;8.88e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.35e-10,42;CL:0002057,6.35e-10,42;CL:0000473,2.53e-07,48;CL:0000234,2.53e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-08;42 | |||
|ontology_enrichment_disease=DOID:0050687!4.15e-11!143;DOID:14566!7.31e-10!239;DOID:305!9.48e-10!106;DOID:162!1.08e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.25e-10,143;DOID:305,1.13e-09,106;DOID:14566,2.47e-08,239;DOID:162,3.64e-08,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=3.27021082687002,2.35510576280081,6.20199378022273,3.00219895059391,3.12872766099101,4.36169262050184,0,1.89515962028049,0.261185628199839,0.245733936501509,0,0.655324116390517,0.263766978228454,0.247532705920093,0.662794751455832,2.6893005858071,1.80808358407193,1.46062018077475,0.975865597581014,0.738726348460727,0.204000691244253,0.626909442956176,1.43117993565528,2.05311637609326,0.627713197974014,2.9801228241701,2.21671591514854,2.36132343941038,0.786728553697808,1.15148819429164,0.464448369948228,0,0,4.43704812200145,2.24654881682875,2.55904618477359,0,0,1.20326668482085,0.868043482863407,0,0.971680998056939,0,13.0858414901608,17.0044174659964,7.27752183563449,20.4537552477002,33.3045989297679,24.7765096716083,24.4538533473828,28.9461598377884,38.0736390120622,11.0318617835718,16.1371170895957,16.251178391321,16.0005988611214,27.8364273059003,27.1915416178552,21.1197885735923,47.1765669801858,19.1801137739712,16.8224163095225,20.9436840502713,16.1965405202424,30.1817608173727,55.6037520197317,41.7290906827035,18.8436498942557,22.4237654920687,27.5829832775498,29.0591761264017,69.2361955656622,56.9632297393592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,3.70801429346238,10.4817354191524,8.02140657017423,7.9665585428453,0.795285947051099,2.91980922181582,2.6469748805939,0.221729397462564,0.702678285545008,0.654895377488563,0.728590576585084,1.11235332835329,2.92092654289215,3.13433527138681,3.32394901297163,1.43094374583205,2.28797964312051,1.11437250398869,9.34183314623514,0.860234595106124,3.81854551768354,6.21838736116411,2.51699661725944,5.22724279686128,2.71693456497854,4.39308490587859,4.62496141492723,4.68608857870538,2.01414658554573,2.28081631715554,0.976248230192678,6.98559852657151,3.24056779152704,5.26868396876071,4.71511682514957,8.1080265947992,3.06633274931766,1.89853131913626,3.84723662253855,0,0,1.3082821564276,6.46063537203914,6.45815609489357,5.29636723252875,18.0707071071753,2.83734705758686,4.48542080113846,1.06748995729705,3.45334567784024,1.24484414159907,9.83387906108723,3.92308567472301,1.36221684880438,0.576175924479999,9.37285727335187,0,2.2818872861778,0.448346041655403,7.86811140913225,3.72307772046703,0.98315564691574,3.67477508258808,0.982674538494144,12.9157226469707,1.18800285728205,4.20353779773547,0.910161361938026,1.43723628363248,2.52504170931099,3.87867411603089,3.04770527032601,4.82875382968922,6.74273150757843,4.5071417671979,2.60894021268048,8.43131287737651,13.4541154955697,6.99375273826554,12.3037349394605,12.675461096328,14.1702297025096,8.37525853492154,5.90717162844432,7.69752340773469,9.34004964703224,11.3221375330028,10.0220555227663,12.0703261455649,6.2466300901137,2.03472710772585,0.773043412653187,0.818238361772504,0.573609190778008,5.12289565744301,3.31324420803713,3.36962434321603,2.28054321033815,3.02785021050754,0.72995471815166,0,1.92972281457866,1.38134921352481,0.464367928031979,1.44375896333917,2.36613600079688,1.51726221070292,2.16909926895134,2.31617342738027,3.05031221729369,2.13543557199987,1.34831308160164,1.96221465125346,1.15424147083917,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0.882926198829301,0.860919069801795,2.05881372358231,0.878002283269004,5.62008766288098,3.51851403440708,6.38860271593854,1.62904152655162,3.11980435583874,1.44331342025273,1.27523445472584,8.21860859650752,1.29929802984966,1.38895653772983,4.18559134916116,0,0,0.738651018262192,1.8720341211139,1.33768046059855,1.87467667973554,1.00789276919316,0.425325291727159,13.8815710189415,6.39394664730716,0.766765358330422,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,1.52795370223311,0,0,0.822619941626588,0.300343057843917,2.28661146104463,2.46688385559794,3.48768055066624,1.9067954313447,9.30756353456,0,0,7.97814349754611,6.24044621468197,0,1.41849132023278,0,14.1548213721566,2.71310802695722,0,0.65147236858747,8.17401482107855,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,11.7416179190875,14.9320516584348,0,1.30303176000821,1.02738161275192,0.716243852959582,6.05259777565047,0,0,0,3.04913549066956,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0,0,2.07207756718018,2.82190430954022,0,7.5954206635926,3.95144636908534,5.17444067511769,9.14674007196821,4.68565659970853,2.70851489754947,0,2.0694614258501,1.99267679560631,2.21243002250044,2.78027566297865,0.979005787313703,1.37257369524342,0.206768026122887,0.431428401637234,0.106727557803444,0,0,1.81434175997808,8.18755765801964,5.67809301165831,3.36792113319688,7.56020980608636,4.09365799253363,4.02134802859019,1.48418066444991,0,2.13074070375753,0.657017248110473,5.19254429183621,0.116210378459959,1.69203229428271,0.601519410909855,13.0755004288973,11.9407026091191,5.82691737621495,5.63834984325524,1.80479845162965,4.08181286653398,0,0,0.844413031143006,1.13733384070897,3.91215522135986,2.59099099322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| ||
|short_description=p2@SLC7A11 | |||
}} | }} |
Latest revision as of 05:45, 25 September 2015
Short description: | p2@SLC7A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC7A11_5end |
Coexpression cluster: | C4372_CD14_maxillary_smallcell_glioblastoma_Mammary_small_gastric |
Association with transcript: | -18bp_to_ENST00000280612, NM_014331, uc011chb.1_5end |
EntrezGene: | SLC7A11 |
HGNC: | 11059 |
UniProt: | Q9UPY5A8K2U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.35e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.35e-10 | 42 |
defensive cell | 2.53e-07 | 48 |
phagocyte | 2.53e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.25e-10 | 143 |
carcinoma | 1.13e-09 | 106 |
disease of cellular proliferation | 2.47e-08 | 239 |
cancer | 3.64e-08 | 235 |