FFCP PHASE1:Hg19::chr4:101439215..101439228,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:101439215..101439228,- to FFCP PHASE1:Hg19::chr4:101439215..101439228,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51705 | |EntrezGene=51705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |HGNC=16041 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC0,B4E347,Q4W5J1 | |UniProt=Q9ULC0,B4E347,Q4W5J1 | ||
|association_with_transcript=21bp_to_ENST00000296420,NM_001159694,NM_016242,uc003hvr.2,uc011cel.1,uc011cem.1_5end | |||
|cluster_id=chr4:101439215..101439228,- | |||
|description=CAGE_peak_6_at_EMCN_5end | |||
|id=chr4:101439215..101439228,- | |||
|ontology_enrichment_celltype=CL:0002139!1.91e-26!24;CL:0000115!4.65e-19!35;CL:0000071!1.84e-18!18;CL:0002546!1.84e-18!18;CL:0002078!2.07e-13!44;CL:0005020!1.05e-09!6;CL:0002138!1.05e-09!6;CL:0005022!1.05e-09!6;CL:1000413!1.20e-09!9;CL:0002543!2.16e-09!6;CL:0000213!1.41e-08!57;CL:0000215!1.41e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.09e-54;24!CL:0000071;2.28e-33;18!CL:0000115;5.02e-31;36!CL:0002138;1.83e-23;6!CL:0002078;4.60e-20;45!CL:0002543;1.17e-16;6!CL:0002544;1.03e-15;6!CL:0000213;2.10e-15;58!CL:0000215;2.10e-15;58!CL:1000413;1.80e-14;9!CL:0002618;4.42e-13;3!CL:0002549;2.08e-08;2!CL:0002617;5.83e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.98e-54,24;CL:0000115,3.03e-38,36;CL:0000071,2.89e-33,18;CL:0002546,2.89e-33,18;CL:0002078,1.53e-29,45;CL:0005020,1.84e-23,6;CL:0002138,1.84e-23,6;CL:0005022,1.84e-23,6;CL:0000213,9.35e-22,58;CL:0000215,9.35e-22,58;CL:0002543,1.21e-16,6;CL:0002544,1.12e-15,6;CL:1000413,2.52e-14,9;CL:0002618,4.35e-13,3;CL:0000222,4.34e-11,121;CL:0002549,2.09e-08,2;CL:0002617,6.75e-08,2;CL:0000076,2.14e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.28e-33;18!CL:0005022;1.83e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-28!115;UBERON:0001986!1.84e-18!18;UBERON:0004638!1.84e-18!18;UBERON:0004852!1.84e-18!18;UBERON:0000477!1.71e-16!286;UBERON:0002616!7.14e-15!59;UBERON:0004111!9.73e-15!241;UBERON:0001049!3.42e-14!57;UBERON:0005068!3.42e-14!57;UBERON:0006241!3.42e-14!57;UBERON:0007135!3.42e-14!57;UBERON:0000487!4.46e-14!22;UBERON:0002049!7.64e-14!79;UBERON:0007798!7.64e-14!79;UBERON:0000025!1.67e-13!194;UBERON:0001017!2.09e-12!82;UBERON:0005743!2.88e-12!86;UBERON:0000055!3.69e-12!69;UBERON:0000955!7.95e-12!69;UBERON:0006238!7.95e-12!69;UBERON:0006914!9.74e-12!25;UBERON:0000073!1.23e-11!94;UBERON:0001016!1.23e-11!94;UBERON:0003075!2.10e-11!86;UBERON:0007284!2.10e-11!86;UBERON:0000119!2.32e-11!312;UBERON:0000483!1.15e-10!309;UBERON:0002346!2.04e-10!90;UBERON:0002780!3.23e-10!41;UBERON:0001890!3.23e-10!41;UBERON:0006240!3.23e-10!41;UBERON:0001009!4.56e-10!113;UBERON:0004535!6.24e-10!110;UBERON:0003080!8.01e-10!42;UBERON:0003915!1.20e-09!9;UBERON:0004700!1.20e-09!9;UBERON:0001917!1.20e-09!9;UBERON:0001981!1.46e-08!60;UBERON:0007500!1.46e-08!60;UBERON:0004537!1.46e-08!60;UBERON:0006965!1.46e-08!60;UBERON:0002020!4.75e-08!34;UBERON:0003528!4.75e-08!34;UBERON:0001893!9.11e-08!34;UBERON:0001638!1.09e-07!9;UBERON:0003920!1.09e-07!9;UBERON:0004582!1.09e-07!9;UBERON:0000468!1.56e-07!659;UBERON:0004872!1.80e-07!84;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0002791!2.81e-07!33;UBERON:0001473!6.28e-07!8;UBERON:0004536!6.28e-07!8;UBERON:0006558!6.28e-07!8;UBERON:0002465!7.47e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.28e-33;18!UBERON:0001986;2.28e-33;18!UBERON:0004852;2.28e-33;18!UBERON:0000487;9.80e-27;22!UBERON:0006914;3.73e-23;25!UBERON:0001473;2.01e-17;8!UBERON:0004536;2.01e-17;8!UBERON:0006558;2.01e-17;8!UBERON:0000490;1.86e-15;33!UBERON:0003915;1.80e-14;9!UBERON:0004700;1.80e-14;9!UBERON:0001917;1.80e-14;9!UBERON:0002465;8.55e-14;10!UBERON:0000055;1.85e-12;65!UBERON:0001638;5.54e-11;9!UBERON:0003920;5.54e-11;9!UBERON:0004582;5.54e-11;9!UBERON:0002049;5.49e-10;75!UBERON:0007798;5.49e-10;75!UBERON:0005629;2.08e-08;2!UBERON:0005358;2.08e-08;2!UBERON:0001886;2.08e-08;2!UBERON:0004086;2.08e-08;2!UBERON:0005282;2.08e-08;2!UBERON:0005281;2.08e-08;2!UBERON:0002066;5.41e-08;5!UBERON:0004535;2.00e-07;109!UBERON:0007500;2.22e-07;56!UBERON:0001981;2.22e-07;56!UBERON:0004537;2.22e-07;56!UBERON:0005284;2.85e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.89e-33,18;UBERON:0001986,2.89e-33,18;UBERON:0004852,2.89e-33,18;UBERON:0000487,1.19e-26,22;UBERON:0006914,4.40e-23,25;UBERON:0002049,3.34e-22,78;UBERON:0007798,3.34e-22,78;UBERON:0000055,1.15e-19,68;UBERON:0001473,2.02e-17,8;UBERON:0004536,2.02e-17,8;UBERON:0006558,2.02e-17,8;UBERON:0004535,1.50e-15,109;UBERON:0001009,5.75e-15,112;UBERON:0003915,2.52e-14,9;UBERON:0004700,2.52e-14,9;UBERON:0001917,2.52e-14,9;UBERON:0002465,8.58e-14,10;UBERON:0007500,5.60e-11,59;UBERON:0001981,5.60e-11,59;UBERON:0004537,5.60e-11,59;UBERON:0006965,5.60e-11,59;UBERON:0001638,5.67e-11,9;UBERON:0003920,5.67e-11,9;UBERON:0004582,5.67e-11,9;UBERON:0005629,2.09e-08,2;UBERON:0005358,2.09e-08,2;UBERON:0001886,2.09e-08,2;UBERON:0004086,2.09e-08,2;UBERON:0005282,2.09e-08,2;UBERON:0005281,2.09e-08,2;UBERON:0002066,5.36e-08,5;UBERON:0004872,6.93e-08,83;UBERON:0005284,3.12e-07,5;UBERON:0004111,6.99e-07,240 | |||
|phase1_expression=1.63510541343501,1.07050261945492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,4.37277296206751,1.72046919021225,3.12426451446835,5.08777147731609,0.838998872419812,0.825354125820202,1.04497483268405,7.49408601591054,11.028754143288,8.03329470635209,0,3.80136052859256,2.92874469057803,1.10298924103761,0,12.1447630466348,11.900056749187,6.41885438754937,3.06633274931766,2.84779697870439,0.732806975721629,0,0,0,0,0.25326102332916,0,0,0.709336764396714,0,0,0,1.24484414159907,0.134710672069688,0,1.36221684880438,3.45705554687999,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0,0,0,1.5189869901714,0.292311015483596,0.252433774244115,0.276149695926898,0,0,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47535988059329,1.38895653772983,4.37584550139576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.308482478109971,0,0,0,0.43596006883328,0.95339771567235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.680374821106063,4.96606607034921,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,2.46426864140871,0,0,0,0,2.232950216158,0.316379424718726,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,1.3749625440701,0.717873024576814,0,0,0.89268582976749,0.739018197353989,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,2.99461687736953,3.40954822877488,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0.258565912723101,0.92562821219883,0,0,3.9511342650047,2.67247318669432,2.07119527673598,0.496166021811951,0,0,0,0,0.5013797880454,0.919036730290385,1.63936315354902,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,1.67593475391973,0.318004350653419,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,1.13831095675649,0,0,0,0.339848664884159,0,0,0,0.627944742804112,0,0,0,0,0,1.85839014859306,0,0,4.69417335216964,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.410651227424988,2.3196288626764,2.91426595835484,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0.580120991762195,0,0,0,0,0,0,0.860037498908708,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0.213233981900981,2.85677317756488,0.0645889098360061,0.124149428591716,0.224263725161227,0.827413057616144,1.61693751166575,0.217716747896961,2.05339980651169,0,0.286888821570705,0.99798106963804,0,0,0,0,0,0.244482888365733,2.84827324821017,0,0.805095174364105,0 | |phase1_expression=1.63510541343501,1.07050261945492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,4.37277296206751,1.72046919021225,3.12426451446835,5.08777147731609,0.838998872419812,0.825354125820202,1.04497483268405,7.49408601591054,11.028754143288,8.03329470635209,0,3.80136052859256,2.92874469057803,1.10298924103761,0,12.1447630466348,11.900056749187,6.41885438754937,3.06633274931766,2.84779697870439,0.732806975721629,0,0,0,0,0.25326102332916,0,0,0.709336764396714,0,0,0,1.24484414159907,0.134710672069688,0,1.36221684880438,3.45705554687999,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0,0,0,1.5189869901714,0.292311015483596,0.252433774244115,0.276149695926898,0,0,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47535988059329,1.38895653772983,4.37584550139576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.308482478109971,0,0,0,0.43596006883328,0.95339771567235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.680374821106063,4.96606607034921,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,2.46426864140871,0,0,0,0,2.232950216158,0.316379424718726,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,1.3749625440701,0.717873024576814,0,0,0.89268582976749,0.739018197353989,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,2.99461687736953,3.40954822877488,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0.258565912723101,0.92562821219883,0,0,3.9511342650047,2.67247318669432,2.07119527673598,0.496166021811951,0,0,0,0,0.5013797880454,0.919036730290385,1.63936315354902,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,1.67593475391973,0.318004350653419,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,1.13831095675649,0,0,0,0.339848664884159,0,0,0,0.627944742804112,0,0,0,0,0,1.85839014859306,0,0,4.69417335216964,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.410651227424988,2.3196288626764,2.91426595835484,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0.580120991762195,0,0,0,0,0,0,0.860037498908708,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0.213233981900981,2.85677317756488,0.0645889098360061,0.124149428591716,0.224263725161227,0.827413057616144,1.61693751166575,0.217716747896961,2.05339980651169,0,0.286888821570705,0.99798106963804,0,0,0,0,0,0.244482888365733,2.84827324821017,0,0.805095174364105,0 | ||
|short_description=p6@EMCN | |||
}} | }} |
Latest revision as of 02:48, 20 September 2015
Short description: | p6@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EMCN_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000296420, NM_001159694, NM_016242, uc003hvr.2, uc011cel.1, uc011cem.1_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | Q9ULC0B4E347Q4W5J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.98e-54 | 24 |
endothelial cell | 3.03e-38 | 36 |
blood vessel endothelial cell | 2.89e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.89e-33 | 18 |
meso-epithelial cell | 1.53e-29 | 45 |
lymphangioblast | 1.84e-23 | 6 |
endothelial cell of lymphatic vessel | 1.84e-23 | 6 |
vascular lymphangioblast | 1.84e-23 | 6 |
lining cell | 9.35e-22 | 58 |
barrier cell | 9.35e-22 | 58 |
vein endothelial cell | 1.21e-16 | 6 |
aortic endothelial cell | 1.12e-15 | 6 |
endothelial cell of artery | 2.52e-14 | 9 |
endothelial cell of umbilical vein | 4.35e-13 | 3 |
mesodermal cell | 4.34e-11 | 121 |
fibroblast of choroid plexus | 2.09e-08 | 2 |
adipocyte of breast | 6.75e-08 | 2 |
squamous epithelial cell | 2.14e-07 | 63 |