FFCP PHASE1:Hg19::chr3:71631382..71631413,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:71631382..71631413,- to FFCP PHASE1:Hg19::chr3:71631382..71631413,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-278bp_to_ENST00000498154_5end | |||
|cluster_id=chr3:71631382..71631413,- | |||
|description=CAGE_peak_20_at_FOXP1_5end | |||
|id=chr3:71631382..71631413,- | |||
|ontology_enrichment_celltype=CL:0002057!2.27e-12!42;CL:0000763!1.94e-11!112;CL:0000049!1.94e-11!112;CL:0000860!2.12e-10!45;CL:0000766!2.51e-10!76;CL:0000839!7.10e-10!70;CL:0000557!1.64e-09!71;CL:0002194!4.76e-08!63;CL:0000576!4.76e-08!63;CL:0000040!4.76e-08!63;CL:0000559!4.76e-08!63;CL:0002009!1.23e-07!65;CL:0000988!9.57e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-14;33!CL:0002057;2.57e-14;33!CL:0000576;9.52e-12;48!CL:0000766;4.26e-10;69!CL:0000473;1.66e-09;39!CL:0000234;1.66e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.82e-19,72;CL:0000860,4.88e-18,42;CL:0002057,4.88e-18,42;CL:0000763,3.45e-17,108;CL:0000049,3.45e-17,108;CL:0000839,1.40e-16,66;CL:0000557,2.85e-16,67;CL:0000473,1.29e-14,48;CL:0000234,1.29e-14,48;CL:0002194,3.00e-14,59;CL:0000576,3.00e-14,59;CL:0000040,3.00e-14,59;CL:0000559,3.00e-14,59;CL:0000988,8.45e-14,177;CL:0002009,1.84e-13,61;CL:0000037,7.05e-12,168;CL:0002032,5.06e-11,161;CL:0000837,5.06e-11,161;CL:0000738,8.67e-10,136;CL:0002031,6.10e-08,120;CL:0000134,9.74e-08,354;CL:0002320,3.62e-07,361;CL:0000349,9.91e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.80e-08!86;UBERON:0002371!3.12e-08!80;UBERON:0002390!3.52e-08!102;UBERON:0003061!3.52e-08!102;UBERON:0003081!8.11e-08!216;UBERON:0000478!2.52e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.14e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.88e-15,82;UBERON:0002371,6.56e-15,76;UBERON:0002390,4.95e-13,98;UBERON:0003061,4.95e-13,98;UBERON:0004765,1.51e-12,90;UBERON:0003081,4.52e-11,203;UBERON:0001434,9.38e-11,100;UBERON:0002193,1.14e-10,108;UBERON:0002405,4.04e-10,93;UBERON:0000478,1.18e-09,24;UBERON:0002384,1.90e-07,371 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,1.52908960491121,2.90143676051299,0,0,0.672325146451775,0.602694528023977,1.46062018077475,0.975865597581014,0.61560529038394,0.816002764977012,0,0,0.136874425072884,0.251085279189606,0,0,0,1.18009283054671,0,1.08371286321253,0,0,0,0.542270404062111,1.13735385989937,2.93600439334847,1.10799081706375,1.00272223735071,1.30206522429511,0,0,0.257575567634187,1.59938062657521,1.51150377475524,1.21292030593908,0.232429036905685,1.23350366406548,0.929119112685311,0.575384784644301,2.30544635876191,1.41889337933151,1.37898272294647,0,0,2.44715041405386,1.09162460023138,1.57306439111559,1.53041946185451,1.92557416245656,1.91801137739712,1.64925650093358,2.39356389145958,1.27867425159808,1.16083695451434,1.13477044938228,2.4912889959823,5.7787193009051,4.69334626578181,5.64690996233303,0,0.736555271975129,0,0.422510572623884,0,1.04829322754188,1.12328631146495,0.750884464207532,2.57160938715328,1.99508920618874,0.39783335439818,1.27864907635244,1.75996244461323,1.09227722252426,0,0.426730222566507,0,1.72425731986345,0,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,2.64342657158052,2.24203425192614,1.58030450865046,0.590129310341499,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,7.15757352345989,2.91980922181582,2.74150969775797,4.65631734671384,6.14843499851882,0.327447688744282,0,0,0.649094787309367,0.348259474598534,0,1.19245312152671,2.28797964312051,1.48583000531826,0,0.860234595106124,0,1.13061588384802,0,0,0.417989933073621,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0.44905874525234,0.450445921933289,0,0,0.183201743930407,0,3.87780264148325,0,1.49091585508596,1.01304409331664,0,0,0,0,1.06748995729705,1.2333377420858,0,0.134710672069688,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0.612975591598039,1.05166641234618,0,1.25572744982203,0.213557388818567,0,1.50045548042201,0.309157587715317,0.515281080091258,0.558350568994769,2.02531598689519,0.584622030967192,0.504867548488229,0.460249493211497,0.161646056818812,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.709840800239063,0.505754070234305,0.964044119533928,0.661763836394364,0.435758888184812,0.237270619111097,0.808987848960987,0.784885860501384,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.614942192715568,0.857839051492628,0,0,0,0.277765335475589,0,1.03993478527958,0,0.579652024875384,4.10930429825376,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.179117045405697,0,0,16.7505500884621,1.05658120815871,1.4512968087854,0.720599767084807,1.00993946741104,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0,2.06834745212444,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0.239624855491583,2.29723871668228,5.70547620162874,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,2.99602809578873,0,2.07207756718018,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,0.300946099727719,0,1.03473071292505,0.664225598535437,0.921845842708516,0,0,0,0,0.215714200818617,0.640365346820666,3.03127571446259,3.32870879020994,3.32629322662648,0,1.68808170616869,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.786746489756545,0.451199612907412,0.462092022626489,0,1.46139224653261,1.26661954671451,1.13733384070897,0,0.647747748306418,0,0.541892875087706,1.50506932156456,0.254876273045038,0,1.79099803777743,0.219259876645935,1.0457418040996,0,0.984043937099117,0,0.206082023295445,0.183138929636687,0,0,0,3.21367859688319,0.193341436584244,0,0,0,0,0,0,1.15741646340759,0.165284915360978,0.384380134730212,0.382838137483752,0.10115778085555,0.464845549297286,0,0,0,1.06461206063404,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.405820753925408,1.8589409885985,0.845086807596724,0.143411352204052,0,1.07001315444375,0,0,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,1.67222857613147,0,0,0,0,1.1490322207942,1.90506224451495,0.649243880549111,1.40398589056729,0,0.47003968731907,17.5444133963047,0.169291777801603,0.963528450622197,1.81619736471943,3.40676990152261,1.03051603426729,3.6868891717015,2.01308497103174,4.0043794010858,0.976940477010201,0,1.23087398947712,0.270455678475983,0.66614393599564,0,0,0.146508179271894,0,0,0,3.81991175580304,1.48482340416319,5.83605333988541,0,0.562677665642051,0.222617410045812,0,0.2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| ||
|short_description=p20@FOXP1 | |||
}} | }} |
Latest revision as of 13:58, 19 September 2015
Short description: | p20@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_FOXP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -278bp_to_ENST00000498154_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.82e-19 | 72 |
classical monocyte | 4.88e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-18 | 42 |
myeloid cell | 3.45e-17 | 108 |
common myeloid progenitor | 3.45e-17 | 108 |
myeloid lineage restricted progenitor cell | 1.40e-16 | 66 |
granulocyte monocyte progenitor cell | 2.85e-16 | 67 |
defensive cell | 1.29e-14 | 48 |
phagocyte | 1.29e-14 | 48 |
monopoietic cell | 3.00e-14 | 59 |
monocyte | 3.00e-14 | 59 |
monoblast | 3.00e-14 | 59 |
promonocyte | 3.00e-14 | 59 |
hematopoietic cell | 8.45e-14 | 177 |
macrophage dendritic cell progenitor | 1.84e-13 | 61 |
hematopoietic stem cell | 7.05e-12 | 168 |
hematopoietic oligopotent progenitor cell | 5.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.06e-11 | 161 |
leukocyte | 8.67e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.10e-08 | 120 |
mesenchymal cell | 9.74e-08 | 354 |
connective tissue cell | 3.62e-07 | 361 |
extraembryonic cell | 9.91e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.88e-15 | 82 |
bone marrow | 6.56e-15 | 76 |
hematopoietic system | 4.95e-13 | 98 |
blood island | 4.95e-13 | 98 |
skeletal element | 1.51e-12 | 90 |
lateral plate mesoderm | 4.52e-11 | 203 |
skeletal system | 9.38e-11 | 100 |
hemolymphoid system | 1.14e-10 | 108 |
immune system | 4.04e-10 | 93 |
extraembryonic structure | 1.18e-09 | 24 |
connective tissue | 1.90e-07 | 371 |