FFCP PHASE1:Hg19::chr3:52188397..52188450,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:52188397..52188450,- to FFCP PHASE1:Hg19::chr3:52188397..52188450,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25886 | |EntrezGene=25886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24488 | |HGNC=24488 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBT0,E9PFC6 | |UniProt=Q8NBT0,E9PFC6 | ||
|association_with_transcript=0bp_to_ENST00000296484,ENST00000474012_5end | |||
|cluster_id=chr3:52188397..52188450,- | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_1_at_POC1A_5end | |||
|id=chr3:52188397..52188450,- | |||
|ontology_enrichment_celltype=CL:0000548!8.38e-24!679;CL:0000004!8.38e-24!679;CL:0000255!8.38e-24!679;CL:0000012!1.79e-23!682;CL:0000066!6.60e-21!254;CL:0002321!2.71e-16!248;CL:0000220!8.90e-16!246;CL:0000003!2.11e-14!722;CL:0000144!5.35e-13!625;CL:0000055!5.69e-11!180;CL:0000063!1.58e-09!578;CL:0002371!4.09e-09!591;CL:0000333!6.10e-08!41;CL:0000221!2.26e-07!71;CL:0000133!2.83e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.27e-21,253;CL:0002321,5.70e-16,250;CL:0000333,4.53e-08,41;CL:1000449,1.80e-07,15;CL:0000133,2.59e-07,59;CL:0000221,5.29e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.49e-26!235;DOID:14566!1.55e-26!239;DOID:2531!1.07e-14!51;DOID:0060083!1.07e-14!51;DOID:0050686!5.13e-14!137;DOID:0050687!1.55e-11!143;DOID:1240!2.55e-11!39;DOID:305!1.06e-09!106;DOID:8692!2.01e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.12e-09;51!DOID:0060083;2.12e-09;51!DOID:1240;4.54e-09;39!DOID:8692;2.41e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.78e-26,235;DOID:14566,2.86e-26,239;DOID:2531,5.83e-15,51;DOID:0060083,5.83e-15,51;DOID:0050686,5.54e-14,137;DOID:1240,1.62e-11,39;DOID:0050687,3.10e-11,143;DOID:305,1.19e-09,106;DOID:8692,1.46e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.55e-07;15!UBERON:0004819;1.55e-07;15!UBERON:0001285;1.55e-07;15!UBERON:0007684;1.55e-07;15!UBERON:0000353;9.77e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.80e-07,15;UBERON:0009773,1.80e-07,15;UBERON:0001231,1.80e-07,15;UBERON:0001285,1.80e-07,15;UBERON:0007684,1.80e-07,15;UBERON:0004208,1.80e-07,15;UBERON:0006555,9.74e-07,16;UBERON:0004819,9.74e-07,16 | |||
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| ||
|short_description=p1@POC1A | |||
}} | }} |
Latest revision as of 22:39, 18 September 2015
Short description: | p1@POC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POC1A_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000296484, ENST00000474012_5end |
EntrezGene: | POC1A |
HGNC: | 24488 |
UniProt: | Q8NBT0E9PFC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.27e-21 | 253 |
embryonic cell | 5.70e-16 | 250 |
migratory neural crest cell | 4.53e-08 | 41 |
epithelial cell of nephron | 1.80e-07 | 15 |
neurectodermal cell | 2.59e-07 | 59 |
ectodermal cell | 5.29e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.80e-07 | 15 |
renal tubule | 1.80e-07 | 15 |
nephron tubule | 1.80e-07 | 15 |
nephron | 1.80e-07 | 15 |
uriniferous tubule | 1.80e-07 | 15 |
nephrogenic mesenchyme | 1.80e-07 | 15 |
excretory tube | 9.74e-07 | 16 |
kidney epithelium | 9.74e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.78e-26 | 235 |
disease of cellular proliferation | 2.86e-26 | 239 |
hematologic cancer | 5.83e-15 | 51 |
immune system cancer | 5.83e-15 | 51 |
organ system cancer | 5.54e-14 | 137 |
leukemia | 1.62e-11 | 39 |
cell type cancer | 3.10e-11 | 143 |
carcinoma | 1.19e-09 | 106 |
myeloid leukemia | 1.46e-08 | 31 |