FFCP PHASE1:Hg19::chr3:46505111..46505126,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:46505111..46505126,- to FFCP PHASE1:Hg19::chr3:46505111..46505126,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4057 | |EntrezGene=4057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6720 | |HGNC=6720 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000478874_5end | |||
|cluster_id=chr3:46505111..46505126,- | |||
|coexpression_cluster_id=C253 | |||
|description=CAGE_peak_3_at_LTF_5end | |||
|id=chr3:46505111..46505126,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.97e-26;7!UBERON:0005754;6.98e-21;1!UBERON:0006965;2.47e-11;2!UBERON:0007297;3.89e-11;2!UBERON:0003918;8.28e-09;10!UBERON:0007687;8.28e-09;10 | |||
|ontology_enrichment_disease=DOID:114!8.41e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.88e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-43!115;UBERON:0003978!2.71e-10!3;UBERON:0009751!2.71e-10!3;UBERON:0000946!2.71e-10!3;UBERON:0002523!2.71e-10!3;UBERON:0005983!2.71e-10!3;UBERON:0002165!2.71e-10!3;UBERON:0002062!2.71e-10!3;UBERON:0007280!2.71e-10!3;UBERON:0002133!1.24e-07!2;UBERON:0003127!1.89e-07!2;UBERON:0002619!8.78e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.69e-28;3!UBERON:0002134;2.08e-21;1!UBERON:0005208;2.08e-21;1!UBERON:0004145;2.08e-21;1!UBERON:0005946;2.08e-21;1!UBERON:0005965;2.08e-21;1!UBERON:0002078;2.08e-21;1!UBERON:0002171;3.82e-21;1!UBERON:0006518;3.82e-21;1!UBERON:0008949;3.82e-21;1!UBERON:0000101;3.82e-21;1!UBERON:0002167;3.82e-21;1!UBERON:0000029;6.98e-21;1!UBERON:0000998;6.98e-21;1!UBERON:0006868;6.98e-21;1!UBERON:0004177;4.11e-17;5!UBERON:0005057;4.11e-17;5!UBERON:0002081;2.12e-11;2!UBERON:0002133;2.12e-11;2!UBERON:0003978;5.01e-08;3!UBERON:0004151;5.01e-08;3!UBERON:0000946;5.01e-08;3!UBERON:0007023;6.38e-08;114!UBERON:0006947;7.50e-08;3!UBERON:0004054;7.50e-08;3!UBERON:0002405;2.71e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.12e-28,3;UBERON:0004854,8.12e-28,3;UBERON:0009034,8.12e-28,3;UBERON:0002095,8.12e-28,3;UBERON:0004782,8.12e-28,3;UBERON:0003281,8.12e-28,3;UBERON:0009664,8.12e-28,3;UBERON:0002296,8.12e-28,3;UBERON:0005602,8.12e-28,3;UBERON:0001179,8.12e-28,3;UBERON:0006293,8.12e-28,3;UBERON:0002134,2.30e-21,1;UBERON:0005208,2.30e-21,1;UBERON:0005946,2.30e-21,1;UBERON:0005965,2.30e-21,1;UBERON:0002078,2.30e-21,1;UBERON:0002171,4.22e-21,1;UBERON:0006518,4.22e-21,1;UBERON:0008949,4.22e-21,1;UBERON:0000101,4.22e-21,1;UBERON:0002167,4.22e-21,1;UBERON:0000029,5.16e-21,1;UBERON:0000998,6.31e-21,1;UBERON:0006868,6.31e-21,1;UBERON:0003887,1.17e-15,12;UBERON:0004177,1.59e-12,7;UBERON:0005057,1.59e-12,7;UBERON:0002081,2.23e-11,2;UBERON:0002133,2.23e-11,2;UBERON:0010227,2.23e-11,2;UBERON:0000945,4.43e-11,8;UBERON:0010039,4.43e-11,8;UBERON:0007023,8.70e-11,114;UBERON:0003978,5.18e-08,3;UBERON:0009751,5.18e-08,3;UBERON:0004151,5.18e-08,3;UBERON:0000946,5.18e-08,3;UBERON:0002523,5.18e-08,3;UBERON:0005983,5.18e-08,3;UBERON:0004145,5.18e-08,3;UBERON:0002165,5.18e-08,3;UBERON:0002062,5.18e-08,3;UBERON:0007280,5.18e-08,3;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3;UBERON:0004457,1.09e-07,12;UBERON:0000042,1.09e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,5.0251111720377,0.599037001496973,2.57535628881943,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,1.02447419488958,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0,2.07119527673598,1.9846640872478,0,0,0,0,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,5.92098683273078,6.57470457330487,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0.606351566874658,0,0,0.606168477131288,0.645499848534087,0.332660356546013,0,0,0,0,0,0.244482888365733,0.813792356631477,0,4.22674966541155,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,5.0251111720377,0.599037001496973,2.57535628881943,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,1.02447419488958,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0,2.07119527673598,1.9846640872478,0,0,0,0,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,5.92098683273078,6.57470457330487,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0.606351566874658,0,0,0.606168477131288,0.645499848534087,0.332660356546013,0,0,0,0,0,0.244482888365733,0.813792356631477,0,4.22674966541155,0 | ||
|short_description=p3@LTF | |||
}} | }} |
Latest revision as of 11:20, 18 September 2015
Short description: | p3@LTF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LTF_5end |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | 7bp_to_ENST00000478874_5end |
EntrezGene: | LTF |
HGNC: | 6720 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.73e-11 | 2 |