FFCP PHASE1:Hg19::chr3:46204959..46204979,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1232 | |EntrezGene=1232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1604 | |HGNC=1604 | ||
|TSSclassifier=strong | |||
|UniProt=P51677 | |UniProt=P51677 | ||
|association_with_transcript=-116bp_to_ENST00000357422,uc003cpg.1_5end | |||
|cluster_id=chr3:46204959..46204979,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_3_at_CCR3_5end | |||
|id=chr3:46204959..46204979,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.43e-22!254;CL:0002076!1.56e-18!43;CL:0000223!5.26e-16!59;CL:0002251!3.45e-11!21;CL:0002541!9.67e-08!3;CL:0000039!3.11e-07!7;CL:0000586!3.11e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000159;6.13e-20;2!CL:0002541;6.55e-13;3!CL:0000319;6.73e-11;1!CL:0000313;8.53e-11;1!CL:0000083;4.44e-10;4!CL:0002563;4.44e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,5.87e-20,2;CL:0002541,4.84e-13,3;CL:0000319,6.73e-11,1;CL:0000313,8.14e-11,1;CL:0002563,3.46e-10,4;CL:0000083,4.35e-10,4;CL:0000066,1.41e-07,253;CL:0000223,5.54e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.25e-27!106;DOID:0050687!3.70e-21!143;DOID:1749!9.37e-14!14;DOID:162!6.65e-11!235;DOID:14566!2.12e-10!239;DOID:299!2.96e-08!25;DOID:0050615!2.17e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3030;6.73e-11;1!DOID:2152;8.53e-11;1!DOID:1799;1.19e-10;1!DOID:10165;1.19e-10;1!DOID:1798;1.19e-10;1!DOID:1749;1.49e-10;14!DOID:0050619;2.62e-10;1!DOID:1357;2.62e-10;1!DOID:1793;4.44e-10;4!DOID:299;3.49e-09;25!DOID:170;5.33e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.72e-14,106;DOID:0050687,7.45e-12,143;DOID:3030,6.73e-11,1;DOID:2152,8.14e-11,1;DOID:1799,1.19e-10,1;DOID:10165,1.19e-10,1;DOID:1798,1.19e-10,1;DOID:0050619,2.08e-10,1;DOID:1357,2.08e-10,1;DOID:1749,2.09e-10,14;DOID:1793,4.35e-10,4;DOID:299,3.26e-09,25;DOID:162,3.22e-07,235;DOID:14566,5.18e-07,239;DOID:170,5.26e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.52e-13!169;UBERON:0000925!3.52e-13!169;UBERON:0006595!3.52e-13!169;UBERON:0005911!1.31e-11!82;UBERON:0005631!2.87e-11!14;UBERON:0000158!2.87e-11!14;UBERON:0001007!1.12e-09!155;UBERON:0001555!1.12e-09!155;UBERON:0007026!1.12e-09!155;UBERON:0005153!5.56e-09!37;UBERON:0001004!1.20e-08!72;UBERON:0000476!9.67e-08!3;UBERON:0000920!9.67e-08!3;UBERON:0000344!1.26e-07!12;UBERON:0000305!1.29e-07!7;UBERON:0005157!2.36e-07!51;UBERON:0002294!2.39e-07!7;UBERON:0001173!2.39e-07!7;UBERON:0004912!2.39e-07!7;UBERON:0000077!2.75e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.55e-13;3!UBERON:0000920;6.55e-13;3!UBERON:0004911;8.53e-11;1!UBERON:0001764;2.62e-10;1!UBERON:0001825;2.62e-10;1!UBERON:0001242;4.44e-10;4!UBERON:0001262;4.44e-10;4!UBERON:0004786;4.44e-10;4!UBERON:0004808;4.44e-10;4!UBERON:0001277;4.44e-10;4!UBERON:0005631;1.25e-08;10!UBERON:0000158;1.25e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.84e-13,3;UBERON:0004911,8.14e-11,1;UBERON:0001764,2.08e-10,1;UBERON:0001825,2.08e-10,1;UBERON:0001242,3.46e-10,4;UBERON:0001262,3.46e-10,4;UBERON:0004786,3.46e-10,4;UBERON:0004808,3.46e-10,4;UBERON:0001277,3.46e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.283550194484773,0.806026704325635,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.659006605437454,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,1.25314822272926,0,0,0,0,0,0,0,0,0.262379999988587,0,0.682760689712998,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.628303510868405,6.08425282763245,0.957003479195758,1.37396390102793,1.5991043280559,0,0,0,0,0,0,0,0,0,1.63232808159148,2.26164914294305,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0.261177619741208,0,0,0.290268993867255,0.511625219603299,0.164230914106418,0,0,0,0.137041924646751,0,0,5.08433595110488,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,1.17847017308398,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,0.449947783103001,0.77380195455795,0,0.670869375198532,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,4.22889013390003,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.12741435385786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94443155503077,0.943757786781923,0,0.115525666150338,0,0,0,0,0,0,2.3571602503328,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0,0,0,0,0,0.667388411352415,0.078493092850514,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,5.14534986269845,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,1.05868461514708,0.802413666891683,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.305966489225945,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.435433495793923,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p3@CCR3 | |||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p3@CCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCR3_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -116bp_to_ENST00000357422, uc003cpg.1_5end |
EntrezGene: | CCR3 |
HGNC: | 1604 |
UniProt: | P51677 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 5.87e-20 | 2 |
chorionic membrane mesenchymal stem cell | 4.84e-13 | 3 |
mucus secreting cell | 6.73e-11 | 1 |
serous secreting cell | 8.14e-11 | 1 |
intestinal epithelial cell | 3.46e-10 | 4 |
epithelial cell of pancreas | 4.35e-10 | 4 |
epithelial cell | 1.41e-07 | 253 |
endodermal cell | 5.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.84e-13 | 3 |
epithelium of female gonad | 8.14e-11 | 1 |
maxillary sinus | 2.08e-10 | 1 |
paranasal sinus | 2.08e-10 | 1 |
intestinal mucosa | 3.46e-10 | 4 |
wall of intestine | 3.46e-10 | 4 |
gastrointestinal system mucosa | 3.46e-10 | 4 |
gastrointestinal system epithelium | 3.46e-10 | 4 |
intestinal epithelium | 3.46e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.72e-14 | 106 |
cell type cancer | 7.45e-12 | 143 |
mucinous adenocarcinoma | 6.73e-11 | 1 |
ovary epithelial cancer | 8.14e-11 | 1 |
islet cell tumor | 1.19e-10 | 1 |
endocrine pancreas cancer | 1.19e-10 | 1 |
pancreatic endocrine carcinoma | 1.19e-10 | 1 |
paranasal sinus cancer | 2.08e-10 | 1 |
maxillary sinus cancer | 2.08e-10 | 1 |
squamous cell carcinoma | 2.09e-10 | 14 |
pancreatic cancer | 4.35e-10 | 4 |
adenocarcinoma | 3.26e-09 | 25 |
cancer | 3.22e-07 | 235 |
disease of cellular proliferation | 5.18e-07 | 239 |
endocrine gland cancer | 5.26e-07 | 6 |