FFCP PHASE1:Hg19::chr3:185300270..185300303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59343 | |EntrezGene=59343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23116 | |HGNC=23116 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYB7 | |UniProt=C9IYB7 | ||
|association_with_transcript=0bp_to_ENST00000430355_5end | |||
|cluster_id=chr3:185300270..185300303,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_5_at_SENP2_5end | |||
|id=chr3:185300270..185300303,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.29e-59!5;CL:0000039!1.20e-27!7;CL:0000586!1.20e-27!7;CL:0000540!6.31e-18!6;CL:0000031!6.31e-18!6;CL:0000404!6.31e-18!6;CL:0000047!1.32e-13!8;CL:0000148!3.50e-11!10;CL:0000541!3.50e-11!10;CL:0000147!3.87e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.60e-66;5!CL:0000039;4.18e-31;7!CL:0000586;4.18e-31;7!CL:0002321;3.18e-22;15!CL:0000540;4.25e-20;6!CL:0000404;4.25e-20;6!CL:0000148;1.52e-12;10!CL:0000147;4.01e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.78e-66,5;CL:0000039,4.18e-31,7;CL:0000586,4.18e-31,7;CL:0000540,4.11e-20,6;CL:0000031,4.11e-20,6;CL:0000404,4.11e-20,6;CL:0000047,2.96e-15,8;CL:0000148,1.55e-12,10;CL:0000541,1.55e-12,10;CL:0000147,4.07e-09,14;CL:0000133,1.90e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.41e-33;10!UBERON:0005564;2.41e-33;10!CL:0000031;4.25e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!4.91e-19!22;DOID:2994!4.91e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.58e-21;22!DOID:2994;1.58e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.58e-21,22;DOID:2994,1.58e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.08e-24!8;UBERON:0003135!1.02e-17!11;UBERON:0000991!4.23e-14!21;UBERON:0009196!4.23e-14!21;UBERON:0009117!4.23e-14!21;UBERON:0005564!4.23e-14!21;UBERON:0004176!1.86e-13!22;UBERON:0003101!5.61e-09!22;UBERON:0000079!5.61e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.85e-27;8!UBERON:0003135;6.10e-20;11!UBERON:0000991;6.34e-16;21!UBERON:0000922;2.19e-13;49!UBERON:0003101;4.10e-10;22!UBERON:0000079;4.10e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.85e-27,8;UBERON:0003135,6.10e-20,11;UBERON:0000991,6.34e-16,21;UBERON:0009196,6.34e-16,21;UBERON:0009117,6.34e-16,21;UBERON:0005564,6.34e-16,21;UBERON:0004176,3.35e-15,22;UBERON:0003101,4.10e-10,22;UBERON:0000079,4.10e-10,22;UBERON:0002323,3.06e-07,46;UBERON:0003133,6.19e-07,48;UBERON:0004458,8.62e-07,49 | |||
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|short_description=p5@SENP2 | |||
}} | }} |
Latest revision as of 03:52, 17 September 2015
Short description: | p5@SENP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SENP2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000430355_5end |
EntrezGene: | SENP2 |
HGNC: | 23116 |
UniProt: | C9IYB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.78e-66 | 5 |
germ line cell | 4.18e-31 | 7 |
germ cell | 4.18e-31 | 7 |
neuron | 4.11e-20 | 6 |
neuroblast | 4.11e-20 | 6 |
electrically signaling cell | 4.11e-20 | 6 |
neuronal stem cell | 2.96e-15 | 8 |
melanocyte | 1.55e-12 | 10 |
melanoblast | 1.55e-12 | 10 |
pigment cell | 4.07e-09 | 14 |
neurectodermal cell | 1.90e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 2.85e-27 | 8 |
male reproductive organ | 6.10e-20 | 11 |
gonad | 6.34e-16 | 21 |
indifferent external genitalia | 6.34e-16 | 21 |
indifferent gonad | 6.34e-16 | 21 |
gonad primordium | 6.34e-16 | 21 |
external genitalia | 3.35e-15 | 22 |
male organism | 4.10e-10 | 22 |
male reproductive system | 4.10e-10 | 22 |
body cavity | 3.06e-07 | 46 |
reproductive organ | 6.19e-07 | 48 |
body cavity or lining | 8.62e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.58e-21 | 22 |
germ cell cancer | 1.58e-21 | 22 |