FFCP PHASE1:Hg19::chr3:149051376..149051400,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:149051376..149051400,- to FFCP PHASE1:Hg19::chr3:149051376..149051400,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116441 | |EntrezGene=116441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25181 | |HGNC=25181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_uc003exa.2_5end | |||
|cluster_id=chr3:149051376..149051400,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_1_at_TM4SF18_5end | |||
|id=chr3:149051376..149051400,- | |||
|ontology_enrichment_celltype=CL:0002139!3.73e-24!24;CL:0000115!1.27e-19!35;CL:0000071!4.00e-18!18;CL:0002546!4.00e-18!18;CL:0002078!5.24e-15!44;CL:1000413!1.36e-09!9;CL:0000213!1.20e-07!57;CL:0000215!1.20e-07!57;CL:0005020!1.37e-07!6;CL:0002138!1.37e-07!6;CL:0005022!1.37e-07!6;CL:0002543!3.44e-07!6;CL:0002544!5.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.12e-30;24!CL:0000115;1.60e-22;36!CL:0000071;1.79e-22;18!CL:0002078;9.58e-14;45!CL:1000413;1.08e-11;9!CL:0002138;3.48e-09;6!CL:0002543;1.13e-08;6!CL:0000213;2.22e-08;58!CL:0000215;2.22e-08;58!CL:0002544;2.22e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.93e-30,24;CL:0000115,1.09e-26,36;CL:0000071,1.70e-22,18;CL:0002546,1.70e-22,18;CL:0002078,2.16e-20,45;CL:0000213,2.47e-12,58;CL:0000215,2.47e-12,58;CL:1000413,1.04e-11,9;CL:0005020,3.50e-09,6;CL:0002138,3.50e-09,6;CL:0005022,3.50e-09,6;CL:0002543,1.11e-08,6;CL:0002544,2.14e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-22;18!CL:0005022;3.48e-09;6!UBERON:0006601;6.42e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.88e-44!115;UBERON:0001049!3.22e-26!57;UBERON:0005068!3.22e-26!57;UBERON:0006241!3.22e-26!57;UBERON:0007135!3.22e-26!57;UBERON:0004111!1.88e-25!241;UBERON:0000025!8.80e-25!194;UBERON:0005743!1.04e-24!86;UBERON:0002616!3.17e-24!59;UBERON:0000477!4.71e-24!286;UBERON:0003075!1.09e-23!86;UBERON:0007284!1.09e-23!86;UBERON:0000073!8.89e-23!94;UBERON:0001016!8.89e-23!94;UBERON:0001017!3.01e-22!82;UBERON:0002346!1.29e-21!90;UBERON:0000955!2.14e-21!69;UBERON:0006238!2.14e-21!69;UBERON:0003080!1.40e-20!42;UBERON:0002780!9.12e-20!41;UBERON:0001890!9.12e-20!41;UBERON:0006240!9.12e-20!41;UBERON:0001986!4.00e-18!18;UBERON:0004638!4.00e-18!18;UBERON:0004852!4.00e-18!18;UBERON:0000119!2.02e-17!312;UBERON:0003056!4.16e-17!61;UBERON:0000483!8.42e-17!309;UBERON:0002020!1.77e-16!34;UBERON:0003528!1.77e-16!34;UBERON:0000487!3.13e-16!22;UBERON:0001893!6.51e-16!34;UBERON:0000153!1.16e-15!129;UBERON:0007811!1.16e-15!129;UBERON:0002791!1.63e-15!33;UBERON:0001869!5.31e-15!32;UBERON:0000033!8.59e-15!123;UBERON:0006914!3.04e-13!25;UBERON:0004121!7.75e-13!169;UBERON:0000468!1.83e-12!659;UBERON:0000467!2.00e-12!625;UBERON:0000480!2.66e-12!626;UBERON:0000924!5.66e-12!173;UBERON:0006601!5.66e-12!173;UBERON:0000956!1.42e-11!25;UBERON:0000203!1.42e-11!25;UBERON:0002619!8.17e-11!22;UBERON:0000481!4.54e-10!347;UBERON:0001950!1.32e-09!20;UBERON:0003915!1.36e-09!9;UBERON:0004700!1.36e-09!9;UBERON:0001917!1.36e-09!9;UBERON:0000922!2.71e-09!612;UBERON:0000064!4.16e-09!219;UBERON:0000475!6.19e-09!365;UBERON:0002050!5.33e-08!605;UBERON:0005423!5.33e-08!605;UBERON:0002049!1.11e-07!79;UBERON:0007798!1.11e-07!79;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0000062!2.25e-07!511;UBERON:0000055!3.66e-07!69;UBERON:0003103!6.47e-07!69;UBERON:0003076!7.33e-07!15;UBERON:0003057!7.33e-07!15;UBERON:0002298!8.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.79e-22;18!UBERON:0001986;1.79e-22;18!UBERON:0004852;1.79e-22;18!UBERON:0000487;5.16e-19;22!UBERON:0006914;7.45e-16;25!UBERON:0002780;7.67e-13;41!UBERON:0001890;7.67e-13;41!UBERON:0000073;2.95e-12;53!UBERON:0002616;2.95e-12;53!UBERON:0003528;8.23e-12;34!UBERON:0002020;8.23e-12;34!UBERON:0003915;1.08e-11;9!UBERON:0004700;1.08e-11;9!UBERON:0001917;1.08e-11;9!UBERON:0001893;1.25e-11;34!UBERON:0002791;1.32e-11;32!UBERON:0007023;1.56e-11;114!UBERON:0001869;2.60e-11;32!UBERON:0000490;1.06e-10;33!UBERON:0002619;3.18e-09;22!UBERON:0001017;8.24e-09;75!UBERON:0000956;1.44e-08;25!UBERON:0000203;1.44e-08;25!UBERON:0001950;7.91e-08;20!UBERON:0001016;8.58e-08;83!UBERON:0000125;1.28e-07;9!UBERON:0002308;1.28e-07;9!UBERON:0000955;4.34e-07;68!UBERON:0001638;9.19e-07;9!UBERON:0003920;9.19e-07;9!UBERON:0004582;9.19e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.71e-43,114;UBERON:0004111,1.29e-22,240;UBERON:0004638,1.70e-22,18;UBERON:0001986,1.70e-22,18;UBERON:0004852,1.70e-22,18;UBERON:0000025,2.31e-22,192;UBERON:0001049,3.53e-22,56;UBERON:0005068,3.53e-22,56;UBERON:0006241,3.53e-22,56;UBERON:0007135,3.53e-22,56;UBERON:0003075,1.62e-20,82;UBERON:0007284,1.62e-20,82;UBERON:0000073,4.15e-20,53;UBERON:0002616,4.15e-20,53;UBERON:0000487,5.51e-19,22;UBERON:0002346,8.11e-19,86;UBERON:0001017,8.43e-18,81;UBERON:0000955,2.48e-17,68;UBERON:0006238,2.48e-17,68;UBERON:0002780,6.01e-17,41;UBERON:0001890,6.01e-17,41;UBERON:0003080,6.01e-17,41;UBERON:0006240,6.01e-17,41;UBERON:0001016,7.50e-17,89;UBERON:0010371,6.11e-16,104;UBERON:0010314,7.20e-16,132;UBERON:0006914,7.87e-16,25;UBERON:0003056,1.28e-14,61;UBERON:0000119,1.63e-14,309;UBERON:0003528,5.40e-14,34;UBERON:0002020,5.40e-14,34;UBERON:0000483,8.01e-14,306;UBERON:0001893,2.06e-13,34;UBERON:0002791,1.80e-12,32;UBERON:0001869,2.51e-12,32;UBERON:0003915,1.04e-11,9;UBERON:0004700,1.04e-11,9;UBERON:0001917,1.04e-11,9;UBERON:0011216,1.71e-10,223;UBERON:0004121,2.39e-09,171;UBERON:0000924,2.39e-09,171;UBERON:0006601,2.39e-09,171;UBERON:0002619,4.64e-09,22;UBERON:0000055,1.37e-08,68;UBERON:0000956,2.23e-08,25;UBERON:0000203,2.23e-08,25;UBERON:0002049,4.42e-08,78;UBERON:0007798,4.42e-08,78;UBERON:0000125,8.74e-08,9;UBERON:0002308,8.74e-08,9;UBERON:0001950,1.10e-07,20;UBERON:0003103,3.02e-07,68;UBERON:0001638,8.80e-07,9;UBERON:0003920,8.80e-07,9;UBERON:0004582,8.80e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,1.14494394852423,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4980901592718,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,3.79839318943367,0,0,0,0,0,0,0,0,18.882428699837,6.881876760849,18.3984465852025,8.47961912886015,7.55098985177831,14.5812562228236,12.121708059135,92.7716165417891,89.2973319343643,102.424507505989,94.2620602035404,39.5341494973627,57.3545835238198,54.7817989715344,9.72170337458112,77.7800633354335,25.5963484793834,37.049177079013,7.66583187329416,19.9345788509307,15.0225430022934,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,3.09834545760283,0.653847612453835,2.4217188423189,0.576175924479999,0,0,1.71141546463335,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,1.45990943630332,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,44.2893272774789,0,0,0,0,0,2.36315962672562,0,0,1.88724591328378,0,0,0,0,0,0,2.88662684050547,0,0,71.6057580894926,52.317362921157,65.4474283687018,0,0,0,0,0,0,0,0.283550194484773,0,0,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0.571652865261156,2.80327710863402,0,5.35369486492935,0,0,3.381211010224,0,0,0,0,0,0,0,0,7.16619605446217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,11.3733384070897,28.0654613706251,22.0234234424182,9.25363516141736,0,0,3.05851527654046,0,0.223874754722178,0,0,18.7208591334964,2.29610251989794,2.60302715731442,5.564214628977,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.689182862422653,0,0,0.426133137080504,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,2.232950216158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,6.3076346520442,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08350711485743,0,0,3.12549761487054,0,0,0,0,2.67271891179974,0,0,2.53350489753592,0.796991953004279,1.93398740871803,0,0,0,0,16.4459082599608,0,0,2.66337195219721,0,0,0,3.9890282209596,1.99613798001194,0,0,8.69999490521752,0,0.508507300585533,0,0,0,0,1.77148277162768,1.4471572635049,3.05163472634166,2.21158519862449,0.591095237907095,1.09692698576986,0,0,4.77091602723542,0,0,0,0,3.19001159731919,0,3.73124343213044,0,0,0,0,0,0,0,0,40.9336245184372,0.326465616318295,0,0,0,1.68069372556344,2.4441205797345,0.296521128680622,0,0,1.34802265961354,8.82835412028668,1.40558667435203,0,0.391329237864179,14.0812620129774,1.18375320854817,4.83962864194656,1.22429104652196,7.01371033876216,0,0,0,0.992975867626496,0,0,0.569219092059585,7.07240832367007,0.867798691675654,0,0,4.71762004253481,0,0,0,0,2.71569246167574,0,4.51961481561065,0,0.19871461170299,1.70939149080872,0,0,1.28071796843612,0,1.44090417154106,0,0,0,0.745515213392595,0,0,0.104602846312333,0,0,5.4037825983881,3.9702559878678,0,0,0,3.35138881526705,3.66656678418694,7.17873024576814,1.19807400299395,2.14613024068285,3.12440040418622,6.18087946877882,0,0,0,0,0,3.44496185301621,0,6.36183751847443,2.31545790389679,0,0.412618309791701,1.24632101408756,0,0,1.33649024647654,0,9.53549058320298,3.19972987623488,4.22401346077626,0.717149357331379,0,8.5763439164804,3.97255182219259,0,0,0,0,0,0,0,0,3.3707013745959,0,3.61992277812342,5.81823447667836,5.98803932595153,0,4.0579216775724,4.71612915298998,3.72815149812476,6.45015828355536,0,0,0,3.26410682021684,6.2672473505675,3.36980134439808,2.29510841496863,0.157054096250234,2.65820453990096,3.05065662254908,2.253436752717,4.58727356552057,4.10437490686353,1.92498849118289,2.07522952404346,0,1.51649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.727394636810238,0,0,0,2.80019435264208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0.655219697692825,0,1.05656061679314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,2.8339315265117,3.67157875831448,1.64093091392604,0.756215088665154,0.345786262321089,0.807378228159255,1.42769420259154,0,0,0,0,0,0.690359926060101,0,2.70757182057326,0,2.34454203369928,0,0.163771917510097,0,1.55336444622308,3.12431239445539,3.30698874401895,1.14148458349032,1.09394961803644,0.548257766857182,3.96968942711435,0,0,0.535701835878287,4.03540466662589,3.03482802118316,3.41493287026946,3.63679717666819,0,14.9194568210554,3.94224451265624,0.72350050919134,0,0,4.86657175673187,2.19961825882403,0,1.82631744101899,24.39981780770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| ||
|short_description=p1@TM4SF18 | |||
}} | }} |
Latest revision as of 21:14, 15 September 2015
Short description: | p1@TM4SF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TM4SF18_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 18bp_to_uc003exa.2_5end |
EntrezGene: | TM4SF18 |
HGNC: | 25181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.93e-30 | 24 |
endothelial cell | 1.09e-26 | 36 |
blood vessel endothelial cell | 1.70e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.70e-22 | 18 |
meso-epithelial cell | 2.16e-20 | 45 |
lining cell | 2.47e-12 | 58 |
barrier cell | 2.47e-12 | 58 |
endothelial cell of artery | 1.04e-11 | 9 |
lymphangioblast | 3.50e-09 | 6 |
endothelial cell of lymphatic vessel | 3.50e-09 | 6 |
vascular lymphangioblast | 3.50e-09 | 6 |
vein endothelial cell | 1.11e-08 | 6 |
aortic endothelial cell | 2.14e-08 | 6 |