FFCP PHASE1:Hg19::chr3:148994474..148994479,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:148994474..148994479,- to FFCP PHASE1:Hg19::chr3:148994474..148994479,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31714 | |HGNC=31714 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000461341_5end | |||
|cluster_id=chr3:148994474..148994479,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_1_at_CPHL1P_5end | |||
|id=chr3:148994474..148994479,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.17e-11;3!CL:0002327;2.11e-08;4!CL:0000082;6.38e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.17e-11,3;CL:0002327,2.11e-08,4;CL:0000082,6.19e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.99e-30;1!UBERON:0008425;1.78e-29;1 | |||
|ontology_enrichment_disease=DOID:5093!8.84e-18!4;DOID:1612!8.84e-18!4;DOID:305!4.38e-11!106;DOID:7!4.43e-11!39;DOID:1325!2.10e-10!7;DOID:3904!2.10e-10!7;DOID:0050687!7.91e-09!143;DOID:8552!1.32e-08!1;DOID:162!9.23e-07!235;DOID:0050686!9.46e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.86e-29;4!DOID:1612;4.86e-29;4!DOID:1325;4.02e-17;7!DOID:3904;4.02e-17;7!DOID:3910;1.54e-15;2!DOID:3905;1.49e-13;9!DOID:1324;1.59e-08;15!DOID:5409;2.43e-08;4!DOID:0050615;4.74e-08;16!DOID:3908;5.38e-07;5!DOID:7;6.45e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.86e-29,4;DOID:1612,4.86e-29,4;DOID:1325,3.71e-17,7;DOID:3904,3.71e-17,7;DOID:3910,1.54e-15,2;DOID:3905,1.40e-13,9;DOID:1324,1.53e-08,15;DOID:5409,2.26e-08,4;DOID:0050615,4.58e-08,16;DOID:7,3.46e-07,39;DOID:3908,5.38e-07,5;DOID:305,5.42e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000310!2.10e-12!10;UBERON:0001443!2.73e-11!11;UBERON:0001736!3.31e-09!1;UBERON:0006298!3.31e-09!1;UBERON:0006122!6.16e-09!1;UBERON:0007029!7.18e-09!1;UBERON:0002394!3.22e-08!4;UBERON:0003928!3.22e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;9.99e-30;1!UBERON:0001829;1.33e-15;2!UBERON:0004903;1.54e-15;2!UBERON:0002173;1.54e-15;2!UBERON:0002186;1.54e-15;2!UBERON:0000310;2.81e-12;10!UBERON:0001443;2.98e-11;11!UBERON:0004821;8.17e-11;3!UBERON:0007499;8.17e-11;3!UBERON:0003215;8.17e-11;3!UBERON:0010368;8.17e-11;3!UBERON:0009911;8.17e-11;3!UBERON:0002299;8.17e-11;3!UBERON:0006524;8.17e-11;3!UBERON:0008874;8.17e-11;3!UBERON:0002169;8.17e-11;3!UBERON:0004894;8.17e-11;3!UBERON:0000915;6.31e-09;52!UBERON:0009856;1.96e-08;4!UBERON:0001911;2.11e-08;4!UBERON:0004802;6.38e-07;19!UBERON:0000115;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,9.99e-30,1;UBERON:0006298,9.99e-30,1;UBERON:0001829,1.33e-15,2;UBERON:0004903,1.54e-15,2;UBERON:0002173,1.54e-15,2;UBERON:0002186,1.54e-15,2;UBERON:0000310,2.81e-12,10;UBERON:0001443,2.98e-11,11;UBERON:0004821,8.17e-11,3;UBERON:0003215,8.17e-11,3;UBERON:0010368,8.17e-11,3;UBERON:0009911,8.17e-11,3;UBERON:0002299,8.17e-11,3;UBERON:0006524,8.17e-11,3;UBERON:0008874,8.17e-11,3;UBERON:0002169,8.17e-11,3;UBERON:0004894,8.17e-11,3;UBERON:0000915,3.45e-09,52;UBERON:0001911,2.11e-08,4;UBERON:0005333,2.11e-08,4;UBERON:0008425,2.11e-08,4;UBERON:0005311,2.11e-08,4;UBERON:0005153,1.36e-07,37;UBERON:0004802,6.19e-07,19;UBERON:0000115,6.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,2.44887999989348,0.724999575434793,0,5.33932665614809,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,1.81155412280008,0,0,57.8490274524673,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3856906519226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,2.44887999989348,0.724999575434793,0,5.33932665614809,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,1.81155412280008,0,0,57.8490274524673,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3856906519226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@CPHL1P | |||
}} | }} |
Latest revision as of 21:13, 15 September 2015
Short description: | p1@CPHL1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPHL1P_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | -23bp_to_ENST00000461341_5end |
EntrezGene: | NA |
HGNC: | 31714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.17e-11 | 3 |
mammary gland epithelial cell | 2.11e-08 | 4 |
epithelial cell of lung | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 9.99e-30 | 1 |
submandibular gland primordium | 9.99e-30 | 1 |
major salivary gland | 1.33e-15 | 2 |
bronchoalveolar duct junction | 1.54e-15 | 2 |
alveolar duct | 1.54e-15 | 2 |
bronchiole | 1.54e-15 | 2 |
breast | 2.81e-12 | 10 |
chest | 2.98e-11 | 11 |
pulmonary alveolus epithelium | 8.17e-11 | 3 |
alveolus | 8.17e-11 | 3 |
pulmonary lobule | 8.17e-11 | 3 |
lobule | 8.17e-11 | 3 |
alveolus of lung | 8.17e-11 | 3 |
alveolar system | 8.17e-11 | 3 |
pulmonary acinus | 8.17e-11 | 3 |
alveolar sac | 8.17e-11 | 3 |
alveolar wall | 8.17e-11 | 3 |
thoracic segment of trunk | 3.45e-09 | 52 |
mammary gland | 2.11e-08 | 4 |
mammary bud | 2.11e-08 | 4 |
mammary ridge | 2.11e-08 | 4 |
mammary placode | 2.11e-08 | 4 |
epithelial bud | 1.36e-07 | 37 |
respiratory tract epithelium | 6.19e-07 | 19 |
lung epithelium | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.86e-29 | 4 |
breast cancer | 4.86e-29 | 4 |
bronchus cancer | 3.71e-17 | 7 |
bronchogenic carcinoma | 3.71e-17 | 7 |
lung adenocarcinoma | 1.54e-15 | 2 |
lung carcinoma | 1.40e-13 | 9 |
lung cancer | 1.53e-08 | 15 |
lung small cell carcinoma | 2.26e-08 | 4 |
respiratory system cancer | 4.58e-08 | 16 |
disease of anatomical entity | 3.46e-07 | 39 |
non-small cell lung carcinoma | 5.38e-07 | 5 |
carcinoma | 5.42e-07 | 106 |