FFCP PHASE1:Hg19::chr3:11761096..11761136,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:11761096..11761136,- to FFCP PHASE1:Hg19::chr3:11761096..11761136,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9686 | |EntrezGene=9686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |HGNC=28966 | ||
|TSSclassifier=strong | |||
|UniProt=F8W708 | |UniProt=F8W708 | ||
|association_with_transcript=0bp_to_ENST00000417206_5end | |||
|cluster_id=chr3:11761096..11761136,- | |||
|description=CAGE_peak_4_at_VGLL4_5end | |||
|id=chr3:11761096..11761136,- | |||
|ontology_enrichment_celltype=CL:0000066!2.76e-23!254;CL:0002076!1.24e-10!43;CL:0000223!5.59e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.95e-09;42!CL:0002368;9.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.63e-20,253;CL:0002076,3.96e-12,42;CL:0000223,4.37e-11,58;CL:0002368,8.55e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.31e-15!169;UBERON:0000925!3.31e-15!169;UBERON:0006595!3.31e-15!169;UBERON:0001007!3.23e-12!155;UBERON:0001555!3.23e-12!155;UBERON:0007026!3.23e-12!155;UBERON:0000466!2.66e-10!126;UBERON:0000464!6.09e-10!104;UBERON:0009569!9.15e-10!113;UBERON:0000077!2.46e-09!130;UBERON:0004921!2.60e-09!129;UBERON:0004185!2.60e-09!129;UBERON:0005177!7.63e-09!107;UBERON:0001004!1.91e-08!72;UBERON:0000064!7.38e-08!219;UBERON:0001041!8.56e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.98e-08;30!UBERON:0001008;5.98e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.23e-13,160;UBERON:0000925,4.23e-13,160;UBERON:0006595,4.23e-13,160;UBERON:0009569,3.32e-11,112;UBERON:0001007,3.28e-10,145;UBERON:0001555,3.28e-10,145;UBERON:0007026,3.28e-10,145;UBERON:0005177,3.86e-10,101;UBERON:0004921,1.92e-08,118;UBERON:0001008,1.53e-07,48;UBERON:0006554,4.03e-07,47;UBERON:0004923,6.14e-07,66;UBERON:0003103,6.21e-07,68 | |||
|phase1_expression=2.90685406832891,2.78330681058278,2.39622486963151,0,1.78784437770915,4.36169262050184,0,0,0.783556884599516,1.47440361900905,10.4670175195864,4.80571018686379,3.9565046734268,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0.975865597581014,1.35433163884467,1.63200552995402,1.56727360739044,1.14494394852423,1.50561867580173,2.88748071068046,0.382067028739756,0.164201178899891,0.393553906568396,0,0,0.309632246632152,3.67768489791571,5.4217065380085,2.21852406100073,1.39440961044543,1.42169232487422,0.587200878669695,0,0.200544447470142,0,0,0.647787332037959,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,1.63841583378639,0,0.853460445133014,0.800791974072025,0,0.661044872784862,0,1.1384259382189,0,1.14681968437569,0,0,0,0.590129310341499,0.786021525498329,1.64481199199607,0.334372990781356,0.32592226663359,1.89379122293893,0,0.222820913770347,0.589211814949674,0.664601683750863,0.541607727530031,1.28091319725675,0.780356085359269,0.657751618414705,0,0,0.296573126324121,0.802622484269139,2.09071047609954,0.793165398882963,0,0.68725489096526,0.253019692019503,0.95569624297229,0.651083453856419,0.950452044448374,1.20460095262218,1.02389288923535,0,0.710331756132051,0.821127996921047,2.01606743224732,1.33720097891754,0.144824403882799,0,0.670700859703636,0.511450247374121,0,1.50401373190767,0.579386075843295,0,1.94653948121054,0.661743720148475,0.443458794925128,0.790513071238134,0.916853528483988,4.37154345951051,6.67411997011973,0,1.39303789839414,1.32957960518865,0,0,0,1.59009925893364,0.860234595106124,2.08284300964557,0.56530794192401,1.25849830862972,0.550236083880135,1.04497483268405,1.29208379584664,1.06729878806013,1.00416183829401,2.01414658554573,2.28081631715554,2.92874469057803,0.735326160691737,0,1.51809538082936,2.91888184414021,1.57656072676651,0,0.949265659568129,1.28241220751285,0,0,7.41359888642308,0.993943903390637,0.633152558322899,0.794455084879313,1.43418310374407,0.354668382198357,2.24271040056923,0,0.74000264525148,1.8672662123986,1.21239604862719,1.30769522490767,0.756787138224657,0.576175924479999,0.70296429550139,0,1.1409436430889,0.747243402759005,0.939475989150119,1.94247533241758,1.12360645361799,0.816616685019573,0.61417158655884,0.929932030581889,2.37600571456411,1.48360157567134,0,1.43723628363248,1.34668891163253,1.50142223846357,0.554128230968366,1.31693286264251,1.22595118319608,1.20190447125277,1.02088964844019,1.61450672119976,0.85422955527427,1.05965950579781,1.50045548042201,0.824420233907511,2.31876486041066,0.744467425326359,0.843881661206331,2.24105111870757,2.27190396819703,1.19664868234989,0.323292113637624,0,1.30977727695932,2.37384829234683,2.70565194428616,1.09098448236334,2.86804595389004,2.19552671033272,3.5783037446801,2.67246068599892,3.10983165046111,1.51392510525377,0.36497735907583,0,0,1.38134921352481,0,0,0.828147600278907,1.34867752062481,0.964044119533928,1.98529150918309,0.871517776369625,0.71181185733329,1.21348177344148,0.588664395376038,0.38474715694639,3.69077727312324,4.20725321410337,3.2925920906512,2.94017422771084,1.26755034821831,0,3.54473944008842,0,2.33678033231916,0.343135620597051,2.41450627898976,3.37205259772859,2.71428225511403,3.24059558054854,0.325808305310325,0,4.3299402607582,1.15930404975077,0.117408694235822,1.87676382089396,0.925971025153221,1.52203321787679,0.790204397959275,0,1.23108503043699,0.234004265139238,1.78357394746474,2.81201501960331,1.6798212819886,0.850650583454319,3.04498977189684,2.61570544662566,3.4504441124869,0.985326475791887,0.264145302039678,0.829312462163088,2.88239906833923,2.27236380167484,1.96843472305724,4.20187268114105,1.17217447210047,1.71072446022705,4.31875469353959,2.10240140490742,0.857479297891735,0.897048674762886,0.43596006883328,0.51336800074665,0.387815147273333,0,2.535908257668,1.06375246633948,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0.65147236858747,1.06617584622764,0,1.50719688529793,0.871533458600294,2.7992437530976,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0.61642896765115,0.537182889719687,0.784596007954691,0.788123040807709,0.431255149719035,1.02674429023799,1.01637849688985,1.30139853857622,0.773288812777695,1.17261385734044,0.637938751653163,0,0,1.65766205374414,1.34960640891054,1.00034104211935,0.271265023699736,0.623912584592421,0.356857977594324,0.630809660135739,1.17141414992713,0.902838299183157,0,2.0694614258501,1.32845119707087,0.368738337083406,0.781952530212746,1.56640925970192,1.02943027143257,0.620304078368662,0,0.74709290462411,2.12189300012382,0,5.14063498660456,2.97729369382532,2.14846762603287,2.80660094433074,1.02511319404561,1.53512174720011,0.965123526861645,2.96836132889982,0.462629081407967,0.355123450626254,0.0821271560138091,1.03850885836724,0.581051892299796,0.966875596732978,1.60405176242628,3.40699659062816,0.459257792658427,0.182091168006717,0.262248829918848,5.4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| ||
|short_description=p4@VGLL4 | |||
}} | }} |
Latest revision as of 18:58, 19 September 2015
Short description: | p4@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417206_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | F8W708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.63e-20 | 253 |
endo-epithelial cell | 3.96e-12 | 42 |
endodermal cell | 4.37e-11 | 58 |
respiratory epithelial cell | 8.55e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.23e-13 | 160 |
endoderm | 4.23e-13 | 160 |
presumptive endoderm | 4.23e-13 | 160 |
subdivision of trunk | 3.32e-11 | 112 |
digestive system | 3.28e-10 | 145 |
digestive tract | 3.28e-10 | 145 |
primitive gut | 3.28e-10 | 145 |
trunk region element | 3.86e-10 | 101 |
subdivision of digestive tract | 1.92e-08 | 118 |
renal system | 1.53e-07 | 48 |
urinary system structure | 4.03e-07 | 47 |
organ component layer | 6.14e-07 | 66 |
compound organ | 6.21e-07 | 68 |