FFCP PHASE1:Hg19::chr3:11645925..11645936,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9686 | |EntrezGene=9686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |HGNC=28966 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9M9 | |UniProt=G5E9M9 | ||
|association_with_transcript=118bp_to_ENST00000413604,uc011aun.1_5end | |||
|cluster_id=chr3:11645925..11645936,- | |||
|description=CAGE_peak_30_at_VGLL4_5end | |||
|id=chr3:11645925..11645936,- | |||
|ontology_enrichment_celltype=CL:0000077!7.90e-12!19;CL:0002602!9.27e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.05e-29;1!CL:0002625;2.05e-29;1!CL:0002581;2.05e-29;1!CL:0000216;2.05e-29;1!CL:0000632;9.43e-11;3!CL:0000746;9.43e-11;3!CL:0000737;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.99e-30,1;CL:0002625,9.99e-30,1;CL:0000216,9.99e-30,1;CL:0002581,1.33e-29,1;CL:0000632,8.99e-11,3;CL:0000746,9.90e-11,3;CL:0000513,9.90e-11,3;CL:0000737,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10!CL:0000513;9.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.76e-10!21;UBERON:0009196!1.76e-10!21;UBERON:0009117!1.76e-10!21;UBERON:0005564!1.76e-10!21;UBERON:0004176!6.36e-10!22;UBERON:0000992!8.36e-08!13;UBERON:0009568!9.27e-07!2;UBERON:0002216!9.27e-07!2;UBERON:0002209!9.27e-07!2;UBERON:0002213!9.27e-07!2;UBERON:0004267!9.27e-07!2;UBERON:0006444!9.27e-07!2;UBERON:0001995!9.27e-07!2;UBERON:0004715!9.27e-07!2;UBERON:0001468!9.27e-07!2;UBERON:0001130!9.27e-07!2;UBERON:0001066!9.27e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.76e-32;8!UBERON:0001136;2.05e-29;1!UBERON:0001343;2.05e-29;1!UBERON:0004910;2.05e-29;1!UBERON:0004813;2.05e-29;1!UBERON:0003135;7.14e-24;11!UBERON:0004909;1.91e-15;2!UBERON:0005406;1.91e-15;2!UBERON:0000991;6.85e-13;21!UBERON:0003101;2.44e-12;22!UBERON:0000079;2.44e-12;22!UBERON:0005904;2.18e-08;4!UBERON:0002107;6.38e-07;19!UBERON:0006925;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.59e-32,8;UBERON:0001136,9.99e-30,1;UBERON:0001343,9.99e-30,1;UBERON:0004910,9.99e-30,1;UBERON:0005154,9.99e-30,1;UBERON:0005295,9.99e-30,1;UBERON:0004813,9.99e-30,1;UBERON:0005297,9.99e-30,1;UBERON:0005294,9.99e-30,1;UBERON:0010141,9.99e-30,1;UBERON:0005891,9.99e-30,1;UBERON:0003135,6.61e-24,11;UBERON:0004909,1.33e-15,2;UBERON:0005406,1.54e-15,2;UBERON:0000991,6.58e-13,21;UBERON:0009196,6.58e-13,21;UBERON:0009117,6.58e-13,21;UBERON:0005564,6.58e-13,21;UBERON:0004176,2.35e-12,22;UBERON:0003101,2.35e-12,22;UBERON:0000079,2.35e-12,22;UBERON:0005904,1.82e-08,4;UBERON:0002107,6.77e-07,19;UBERON:0006925,6.77e-07,19;UBERON:0008836,6.77e-07,19 | |||
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| ||
|short_description=p30@VGLL4 | |||
}} | }} |
Latest revision as of 18:28, 19 September 2015
Short description: | p30@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENST00000413604, uc011aun.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.99e-30 | 1 |
seminiferous tubule epithelial cell | 9.99e-30 | 1 |
Sertoli cell | 9.99e-30 | 1 |
perirenal preadipocyte | 1.33e-29 | 1 |
hepatic stellate cell | 8.99e-11 | 3 |
cardiac muscle cell | 9.90e-11 | 3 |
cardiac muscle myoblast | 9.90e-11 | 3 |
striated muscle cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.59e-32 | 8 |
mesothelium | 9.99e-30 | 1 |
seminiferous tubule of testis | 9.99e-30 | 1 |
epithelium of male gonad | 9.99e-30 | 1 |
epithelial cord | 9.99e-30 | 1 |
sex cord | 9.99e-30 | 1 |
seminiferous tubule epithelium | 9.99e-30 | 1 |
testis sex cord | 9.99e-30 | 1 |
genital ridge | 9.99e-30 | 1 |
primitive sex cord of indifferent gonad | 9.99e-30 | 1 |
coelomic epithelium | 9.99e-30 | 1 |
male reproductive organ | 6.61e-24 | 11 |
epithelium of gonad | 1.33e-15 | 2 |
perirenal fat | 1.54e-15 | 2 |
gonad | 6.58e-13 | 21 |
indifferent external genitalia | 6.58e-13 | 21 |
indifferent gonad | 6.58e-13 | 21 |
gonad primordium | 6.58e-13 | 21 |
external genitalia | 2.35e-12 | 22 |
male organism | 2.35e-12 | 22 |
male reproductive system | 2.35e-12 | 22 |
duct of male reproductive system | 1.82e-08 | 4 |
liver | 6.77e-07 | 19 |
digestive gland | 6.77e-07 | 19 |
liver bud | 6.77e-07 | 19 |