FFCP PHASE1:Hg19::chr2:9695847..9695966,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:9695847..9695966,- to FFCP PHASE1:Hg19::chr2:9695847..9695966,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6868 | |EntrezGene=6868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |HGNC=195 | ||
|TSSclassifier=strong | |||
|UniProt=P78536,E7EUI5,A6H8L4,B2RNB2,A8K1B4 | |UniProt=P78536,E7EUI5,A6H8L4,B2RNB2,A8K1B4 | ||
|association_with_transcript=0bp_to_ENST00000310823,ENST00000478059,ENST00000497134,ENST00000538558,NM_003183,uc002qzu.2,uc002qzv.2,uc010ewy.2,uc010ewz.2,uc010exb.1_5end | |||
|cluster_id=chr2:9695847..9695966,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ADAM17_5end | |||
|id=chr2:9695847..9695966,- | |||
|ontology_enrichment_celltype=CL:0002057!5.38e-22!42;CL:0000766!2.50e-21!76;CL:0000860!7.21e-19!45;CL:0002009!8.90e-19!65;CL:0000557!9.47e-19!71;CL:0002194!6.81e-18!63;CL:0000576!6.81e-18!63;CL:0000040!6.81e-18!63;CL:0000559!6.81e-18!63;CL:0000738!2.33e-16!140;CL:0000839!4.73e-16!70;CL:0000763!4.84e-15!112;CL:0000049!4.84e-15!112;CL:0002087!1.70e-12!119;CL:0000037!4.19e-12!172;CL:0000566!4.19e-12!172;CL:0002032!4.81e-12!165;CL:0000837!4.81e-12!165;CL:0002031!9.61e-12!124;CL:0000988!5.99e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-19;33!CL:0002057;3.63e-19;33!CL:0000473;3.51e-15;39!CL:0000234;3.51e-15;39!CL:0000576;1.24e-14;48!CL:0000766;3.81e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.22e-24,72;CL:0000860,5.38e-22,42;CL:0002057,5.38e-22,42;CL:0002009,1.29e-21,61;CL:0000557,2.09e-21,67;CL:0000473,7.35e-21,48;CL:0000234,7.35e-21,48;CL:0002194,1.07e-20,59;CL:0000576,1.07e-20,59;CL:0000040,1.07e-20,59;CL:0000559,1.07e-20,59;CL:0000839,1.89e-18,66;CL:0000738,7.06e-18,136;CL:0000763,1.07e-16,108;CL:0000049,1.07e-16,108;CL:0002087,6.73e-14,115;CL:0000037,3.34e-13,168;CL:0002032,3.63e-13,161;CL:0000837,3.63e-13,161;CL:0002031,4.69e-13,120;CL:0000988,3.42e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-16;42 | |||
|ontology_enrichment_disease=DOID:0050687!5.09e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.09e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.64e-19!102;UBERON:0003061!5.64e-19!102;UBERON:0002193!2.22e-18!112;UBERON:0002371!1.03e-15!80;UBERON:0001474!3.73e-13!86;UBERON:0002405!1.83e-12!115;UBERON:0004765!1.41e-11!101;UBERON:0001434!1.41e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.78e-21,98;UBERON:0003061,4.78e-21,98;UBERON:0002193,2.79e-20,108;UBERON:0002371,7.35e-18,76;UBERON:0002405,8.59e-17,93;UBERON:0004765,4.25e-15,90;UBERON:0001474,5.89e-15,82;UBERON:0001434,1.04e-12,100 | |||
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| ||
|short_description=p1@ADAM17 | |||
}} | }} |
Latest revision as of 00:51, 19 September 2015
Short description: | p1@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAM17_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000310823, ENST00000478059, ENST00000497134, ENST00000538558, NM_003183, uc002qzu.2, uc002qzv.2, uc010ewy.2, uc010ewz.2, uc010exb.1_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | P78536E7EUI5A6H8L4B2RNB2A8K1B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.22e-24 | 72 |
classical monocyte | 5.38e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.38e-22 | 42 |
macrophage dendritic cell progenitor | 1.29e-21 | 61 |
granulocyte monocyte progenitor cell | 2.09e-21 | 67 |
defensive cell | 7.35e-21 | 48 |
phagocyte | 7.35e-21 | 48 |
monopoietic cell | 1.07e-20 | 59 |
monocyte | 1.07e-20 | 59 |
monoblast | 1.07e-20 | 59 |
promonocyte | 1.07e-20 | 59 |
myeloid lineage restricted progenitor cell | 1.89e-18 | 66 |
leukocyte | 7.06e-18 | 136 |
myeloid cell | 1.07e-16 | 108 |
common myeloid progenitor | 1.07e-16 | 108 |
nongranular leukocyte | 6.73e-14 | 115 |
hematopoietic stem cell | 3.34e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 4.69e-13 | 120 |
hematopoietic cell | 3.42e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.78e-21 | 98 |
blood island | 4.78e-21 | 98 |
hemolymphoid system | 2.79e-20 | 108 |
bone marrow | 7.35e-18 | 76 |
immune system | 8.59e-17 | 93 |
skeletal element | 4.25e-15 | 90 |
bone element | 5.89e-15 | 82 |
skeletal system | 1.04e-12 | 100 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.09e-07 | 143 |