FFCP PHASE1:Hg19::chr2:26205340..26205381,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:26205340..26205381,- to FFCP PHASE1:Hg19::chr2:26205340..26205381,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3797 | |EntrezGene=3797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6321 | |HGNC=6321 | ||
|TSSclassifier=strong | |||
|UniProt=O14782,F8WER6,F8WAR6,F5GYJ7 | |UniProt=O14782,F8WER6,F8WAR6,F5GYJ7 | ||
|association_with_transcript=0bp_to_ENST00000264712,ENST00000417737,ENST00000455394,ENST00000542511_5end | |||
|cluster_id=chr2:26205340..26205381,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_KIF3C_5end | |||
|id=chr2:26205340..26205381,- | |||
|ontology_enrichment_celltype=CL:0002321!3.90e-18!248;CL:0000220!1.64e-17!246;CL:0000055!5.04e-15!180;CL:0000222!3.77e-12!119;CL:0000221!4.73e-10!71;CL:0000133!4.76e-09!59;CL:0000393!4.87e-09!60;CL:0000211!4.87e-09!60;CL:0000183!7.38e-09!59;CL:0000359!7.49e-08!32;CL:0000680!8.02e-08!57;CL:0000056!8.02e-08!57;CL:0000355!8.02e-08!57;CL:0000192!8.16e-08!42;CL:0000514!8.16e-08!42;CL:0000187!1.06e-07!54;CL:0000333!1.21e-07!41;CL:0000071!7.93e-07!18;CL:0002546!7.93e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.21e-07;32!CL:0000071;7.05e-07;18!CL:1000449;8.40e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.89e-18,250;CL:0000222,1.79e-12,121;CL:0000221,9.60e-10,72;CL:0000393,3.52e-09,61;CL:0000211,3.52e-09,61;CL:0000133,5.14e-09,59;CL:0000680,5.91e-08,58;CL:0000056,5.91e-08,58;CL:0000355,5.91e-08,58;CL:0000192,6.15e-08,43;CL:0000514,6.15e-08,43;CL:0000359,6.73e-08,32;CL:0000187,7.81e-08,55;CL:0000333,1.09e-07,41;CL:0000071,7.25e-07,18;CL:0002546,7.25e-07,18;CL:1000449,9.40e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;7.05e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.11e-18;32!UBERON:0003528;1.79e-18;34!UBERON:0002020;1.79e-18;34!UBERON:0002791;2.52e-18;32!UBERON:0001893;6.94e-18;34!UBERON:0000956;1.45e-16;25!UBERON:0000203;1.45e-16;25!UBERON:0002780;4.85e-16;41!UBERON:0001890;4.85e-16;41!UBERON:0002619;7.42e-16;22!UBERON:0000073;1.30e-15;53!UBERON:0002616;1.30e-15;53!UBERON:0001950;1.56e-14;20!UBERON:0000955;3.20e-13;68!UBERON:0001017;5.61e-13;75!UBERON:0001016;4.82e-12;83!UBERON:0003914;1.06e-08;74!UBERON:0001637;1.67e-08;42!UBERON:0003509;1.67e-08;42!UBERON:0004572;1.67e-08;42!UBERON:0004573;3.72e-08;33!UBERON:0004571;3.72e-08;33!UBERON:0007500;1.61e-07;56!UBERON:0001981;1.61e-07;56!UBERON:0004537;1.61e-07;56!UBERON:0004733;4.02e-07;12!UBERON:0002028;4.02e-07;12!UBERON:0004638;7.05e-07;18!UBERON:0001986;7.05e-07;18!UBERON:0004852;7.05e-07;18!UBERON:0004732;7.76e-07;13!UBERON:0006555;8.40e-07;15!UBERON:0004819;8.40e-07;15!UBERON:0001285;8.40e-07;15!UBERON:0007684;8.40e-07;15!UBERON:0000487;9.50e-07;22 | |||
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| ||
|short_description=p2@KIF3C | |||
}} | }} |
Latest revision as of 14:25, 16 September 2015
Short description: | p2@KIF3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIF3C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000264712, ENST00000417737, ENST00000455394, ENST00000542511_5end |
EntrezGene: | KIF3C |
HGNC: | 6321 |
UniProt: | O14782F8WER6F8WAR6F5GYJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.89e-18 | 250 |
mesodermal cell | 1.79e-12 | 121 |
ectodermal cell | 9.60e-10 | 72 |
electrically responsive cell | 3.52e-09 | 61 |
electrically active cell | 3.52e-09 | 61 |
neurectodermal cell | 5.14e-09 | 59 |
muscle precursor cell | 5.91e-08 | 58 |
myoblast | 5.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.91e-08 | 58 |
smooth muscle cell | 6.15e-08 | 43 |
smooth muscle myoblast | 6.15e-08 | 43 |
vascular associated smooth muscle cell | 6.73e-08 | 32 |
muscle cell | 7.81e-08 | 55 |
migratory neural crest cell | 1.09e-07 | 41 |
blood vessel endothelial cell | 7.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.25e-07 | 18 |
epithelial cell of nephron | 9.40e-07 | 15 |