FFCP PHASE1:Hg19::chr2:234398529..234398553,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:234398529..234398553,- to FFCP PHASE1:Hg19::chr2:234398529..234398553,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55230 | |EntrezGene=55230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20069 | |HGNC=20069 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000496298_5end | |||
|cluster_id=chr2:234398529..234398553,- | |||
|coexpression_cluster_id=C4198 | |||
|description=CAGE_peak_2_at_USP40_5end | |||
|id=chr2:234398529..234398553,- | |||
|ontology_enrichment_celltype=CL:0000077!2.09e-15!19;CL:0000066!9.72e-09!254;CL:0000220!4.82e-08!246;CL:0002321!8.12e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.53e-18;19!CL:0000244;2.82e-13;4!CL:0000731;2.82e-13;4!CL:0000349;6.93e-09;19!CL:0000150;3.57e-08;9!CL:0002097;7.22e-08;2!CL:0000359;1.93e-07;32!CL:0002536;9.11e-07;2!CL:0002588;9.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.91e-18,19;CL:0000244,3.52e-13,4;CL:0000731,3.52e-13,4;CL:0000349,6.20e-09,19;CL:0000222,6.72e-09,121;CL:0002321,8.69e-09,250;CL:0000359,2.00e-08,32;CL:0000150,3.42e-08,9;CL:0002097,7.36e-08,2;CL:0000066,8.09e-08,253;CL:0002588,6.30e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!1.71e-07!6;UBERON:0000365!2.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.10e-16;5!UBERON:0005910;1.85e-13;6!UBERON:0000486;6.03e-12;12!UBERON:0000478;9.47e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.99e-16,5;UBERON:0005910,2.27e-13,6;UBERON:0000486,4.75e-08,83;UBERON:0003124,3.71e-07,7;UBERON:0005631,4.29e-07,14;UBERON:0000158,4.29e-07,14;UBERON:0000478,8.71e-07,24 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.422863212287913,0,0,0.872338524100369,0,0,0,0,1.39560233594486,1.31064823278103,2.11013582582763,0.495065411840187,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0.397227542439656,0.860509862246441,0.709336764396714,0,0,0.49333509683432,0,1.0776853765575,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.773043412653187,2.72746120590835,1.43402297694502,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,1.1240175325762,0.804231779293047,0.185176890317059,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0.93733833986777,3.02367830757947,1.41775097242386,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,2.84397774667111,0,0,0,0,0,0,0,0,0,4.93944202068461,0,0,0.791951872933429,2.71295439353627,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,0,2.68094105557689,2.92853537481783,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,4.99306318531491,1.5119514666484,2.23297027036899,1.38115775959256,0.561320188866147,0.768834895534206,0,0.160853921143607,2.96836132889982,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0.826424576804891,0.960950336825531,0.765676274967505,0.4046311234222,0.464845549297286,0,0,0,1.06461206063404,0,0.74129687641568,1.28812398067792,0,1.58189712359363,0.953150969619124,0,0,0,0,0,0,0,1.41527737101321,0,0.842516912477962,0,0,2.11300293513511,0,0,0,2.2054613741845,2.65375590096488,0.876901770507525,0,0,1.01455188481352,0,0,1.43411352204052,2.75097314836739,1.07001315444375,0,0,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0,9.04061282609583,3.36942951335251,5.76459199597678,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.614321404198464,0,0,7.34637453151179,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0014224119131,0,0,0,0.638002319463839,2.47313502185028,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,4.50028623543806,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.246346371159628,0.193978032976839,0,0,0,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,1.17847017308398,0,0,0.101998217636322,1.44475294950759,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,1.36310417428337,0.113312091520126,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0.147855149989634,0.955780602982214,0,0.155262956876259,0,2.65841714557995,0.521745061811734,4.50772826991655,1.90402606084398,2.03435366602331,0,3.32972726831714,0,0.398095888698616,0,0,0,1.26184898228651,17.3357847366573,39.4572528129863,0.260994291965212,7.48129554190499,9.26089897295336,0.734210113519403,2.8654214573038,2.77921302444875,4.60496504115285,1.23682402162117,0.771656153083659,6.75769762612291,0,0.345430341731199,2.12701969324168,0.138258436151731,0,0,0,0,39.8152112181025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0.924205329202706,0,1.3807198521202,0,0,0,0,0,0.327543835020193,0,0,0,0,0.317079050969534,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,5.48761630199739,0.135939465953663,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,1.24329698497822,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.286679166302903,0,0,0,0,1.85997509083376,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.124149428591716,0,0,0,0,0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| |phase1_expression=1.09007027562334,0.642301571672949,0.422863212287913,0,0,0.872338524100369,0,0,0,0,1.39560233594486,1.31064823278103,2.11013582582763,0.495065411840187,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0.397227542439656,0.860509862246441,0.709336764396714,0,0,0.49333509683432,0,1.0776853765575,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.773043412653187,2.72746120590835,1.43402297694502,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,1.1240175325762,0.804231779293047,0.185176890317059,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0.93733833986777,3.02367830757947,1.41775097242386,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,2.84397774667111,0,0,0,0,0,0,0,0,0,4.93944202068461,0,0,0.791951872933429,2.71295439353627,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,0,2.68094105557689,2.92853537481783,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,4.99306318531491,1.5119514666484,2.23297027036899,1.38115775959256,0.561320188866147,0.768834895534206,0,0.160853921143607,2.96836132889982,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0.826424576804891,0.960950336825531,0.765676274967505,0.4046311234222,0.464845549297286,0,0,0,1.06461206063404,0,0.74129687641568,1.28812398067792,0,1.58189712359363,0.953150969619124,0,0,0,0,0,0,0,1.41527737101321,0,0.842516912477962,0,0,2.11300293513511,0,0,0,2.2054613741845,2.65375590096488,0.876901770507525,0,0,1.01455188481352,0,0,1.43411352204052,2.75097314836739,1.07001315444375,0,0,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0,9.04061282609583,3.36942951335251,5.76459199597678,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.614321404198464,0,0,7.34637453151179,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0014224119131,0,0,0,0.638002319463839,2.47313502185028,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,4.50028623543806,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.246346371159628,0.193978032976839,0,0,0,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,1.17847017308398,0,0,0.101998217636322,1.44475294950759,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,1.36310417428337,0.113312091520126,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0.147855149989634,0.955780602982214,0,0.155262956876259,0,2.65841714557995,0.521745061811734,4.50772826991655,1.90402606084398,2.03435366602331,0,3.32972726831714,0,0.398095888698616,0,0,0,1.26184898228651,17.3357847366573,39.4572528129863,0.260994291965212,7.48129554190499,9.26089897295336,0.734210113519403,2.8654214573038,2.77921302444875,4.60496504115285,1.23682402162117,0.771656153083659,6.75769762612291,0,0.345430341731199,2.12701969324168,0.138258436151731,0,0,0,0,39.8152112181025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0.924205329202706,0,1.3807198521202,0,0,0,0,0,0.327543835020193,0,0,0,0,0.317079050969534,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,5.48761630199739,0.135939465953663,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,1.24329698497822,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.286679166302903,0,0,0,0,1.85997509083376,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.124149428591716,0,0,0,0,0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| ||
|short_description=p2@USP40 | |||
}} | }} |
Latest revision as of 23:12, 15 September 2015
Short description: | p2@USP40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP40_5end |
Coexpression cluster: | C4198_mesothelioma_mucinous_cholangiocellular_Urothelial_transitionalcell_anaplastic_pleomorphic |
Association with transcript: | -14bp_to_ENST00000496298_5end |
EntrezGene: | USP40 |
HGNC: | 20069 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.91e-18 | 19 |
transitional epithelial cell | 3.52e-13 | 4 |
urothelial cell | 3.52e-13 | 4 |
extraembryonic cell | 6.20e-09 | 19 |
mesodermal cell | 6.72e-09 | 121 |
embryonic cell | 8.69e-09 | 250 |
vascular associated smooth muscle cell | 2.00e-08 | 32 |
glandular epithelial cell | 3.42e-08 | 9 |
cortical cell of adrenal gland | 7.36e-08 | 2 |
epithelial cell | 8.09e-08 | 253 |
smooth muscle cell of the umbilical vein | 6.30e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.99e-16 | 5 |
transitional epithelium | 2.27e-13 | 6 |
multilaminar epithelium | 4.75e-08 | 83 |
chorion | 3.71e-07 | 7 |
extraembryonic membrane | 4.29e-07 | 14 |
membranous layer | 4.29e-07 | 14 |
extraembryonic structure | 8.71e-07 | 24 |