FFCP PHASE1:Hg19::chr2:224849573..224849582,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:224849573..224849582,- to FFCP PHASE1:Hg19::chr2:224849573..224849582,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=202bp_to_ENST00000478966_5end | |||
|cluster_id=chr2:224849573..224849582,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_19_at_SERPINE2_5end | |||
|id=chr2:224849573..224849582,- | |||
|ontology_enrichment_celltype=CL:0000055!7.77e-17!180;CL:0000057!1.64e-12!75;CL:0002620!1.35e-07!23;CL:0000499!2.88e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.19e-14;3!CL:0000388;2.19e-14;3!CL:0002541;3.14e-14;3!CL:0002579;4.48e-14;3!CL:1000306;1.56e-10;4!CL:0002547;1.56e-10;4!CL:0002334;4.04e-09;12!CL:0000499;4.49e-09;28!CL:0000153;2.76e-08;9!CL:0000447;2.76e-08;9!CL:0000138;2.54e-07;6!CL:0000515;9.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.41e-14,3;CL:0000388,2.41e-14,3;CL:0002541,3.15e-14,3;CL:0002579,7.66e-14,3;CL:1000306,9.89e-11,4;CL:0002547,9.89e-11,4;CL:0000057,1.14e-09,76;CL:0002334,4.19e-09,12;CL:0000499,4.30e-09,28;CL:0000153,2.51e-08,9;CL:0000447,2.51e-08,9;CL:0000058,2.34e-07,6;CL:0000138,2.34e-07,6;CL:0000048,7.53e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.45e-07;3!DOID:127;4.45e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.95e-07,3;DOID:127,3.95e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.19e-08!6;UBERON:0002358!5.19e-08!6;UBERON:0003684!5.19e-08!6;UBERON:0001178!5.19e-08!6;UBERON:0004457!5.14e-07!12;UBERON:0000042!5.14e-07!12;UBERON:0002097!5.66e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.19e-14;3!UBERON:0000043;2.19e-14;3!UBERON:0007845;2.19e-14;3!UBERON:0003124;3.14e-14;3!UBERON:0000920;3.14e-14;3!UBERON:0004457;1.40e-12;9!UBERON:0000042;1.40e-12;9!UBERON:0003688;2.22e-12;6!UBERON:0002358;2.22e-12;6!UBERON:0003684;2.22e-12;6!UBERON:0001178;2.22e-12;6!UBERON:0005406;1.53e-10;2!UBERON:0004797;1.56e-10;4!UBERON:0000415;1.56e-10;4!UBERON:0007240;1.56e-10;4!UBERON:0005742;1.56e-10;4!UBERON:0005734;1.56e-10;4!UBERON:0004664;1.56e-10;4!UBERON:0004663;1.56e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.41e-14,3;UBERON:0000043,2.41e-14,3;UBERON:0007845,2.41e-14,3;UBERON:0000920,3.15e-14,3;UBERON:0003688,3.26e-12,6;UBERON:0002358,3.26e-12,6;UBERON:0003684,3.26e-12,6;UBERON:0001178,3.26e-12,6;UBERON:0000415,9.89e-11,4;UBERON:0007240,9.89e-11,4;UBERON:0005742,9.89e-11,4;UBERON:0005734,9.89e-11,4;UBERON:0004664,9.89e-11,4;UBERON:0004663,9.89e-11,4;UBERON:0005406,1.53e-10,2;UBERON:0004457,2.90e-09,12;UBERON:0000042,2.90e-09,12;UBERON:0004923,2.43e-07,66 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,6.00439790118782,0.893922188854576,6.97870819280295,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0.50133791063589,1.59331170856906,0.795285947051099,7.29952305453954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.64619665163954,0.662045904066094,6.02356903572509,1.41867352879343,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0.717558542755448,0.640672166455702,0.635795703478686,0.900273288253207,1.03052529238439,1.03056216018252,0.744467425326359,0.168776332241266,0.584622030967192,0.504867548488229,0.0920498986422993,0,3.19508633264953,1.10827308050404,0,0,0,0.286804595389004,0.365921118388786,0,0,0.310983165046111,0,0,3.12899064659632,0.643240938192885,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.308482478109971,0.600686115687835,0,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,2.17171960001369,1.64381058040307,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,4.5481500811197,1.03473071292505,0,0.368738337083406,1.21637060255316,0,0,0,0,0,0,0,0,1.98486246255021,0.153461973288062,0.841980283299221,2.17836553734692,1.02341449813341,4.02134802859019,4.45254199334973,0.154209693802656,0,0,0,0,0,1.40354529212299,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,3.77774816196768,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,1.94970791705028,0,0.272999822815972,0.424216295861138,0,1.10273068709225,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0,0,0,4.85547561184627,0.658589785919804,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,2.23300811812344,1.19076871422421,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0.0674035438541849,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0.717149357331379,0,0,0.662091970365432,0,4.88699641578341,0.864221491201268,2.28611152076586,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0.758245587708239,0,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,1.13641803165053,0.50313580350515,0,0.915360273587694,0.302461847526478,0.466311601748341,0.591420599958536,0.159296767163702,0,0.155262956876259,5.39118070193112,1.06336685823198,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.818859587550484,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,3.34795516350076,3.69740502905135,2.16313281061895,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0.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| |phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,6.00439790118782,0.893922188854576,6.97870819280295,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0.50133791063589,1.59331170856906,0.795285947051099,7.29952305453954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.64619665163954,0.662045904066094,6.02356903572509,1.41867352879343,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0.717558542755448,0.640672166455702,0.635795703478686,0.900273288253207,1.03052529238439,1.03056216018252,0.744467425326359,0.168776332241266,0.584622030967192,0.504867548488229,0.0920498986422993,0,3.19508633264953,1.10827308050404,0,0,0,0.286804595389004,0.365921118388786,0,0,0.310983165046111,0,0,3.12899064659632,0.643240938192885,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.308482478109971,0.600686115687835,0,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,2.17171960001369,1.64381058040307,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,4.5481500811197,1.03473071292505,0,0.368738337083406,1.21637060255316,0,0,0,0,0,0,0,0,1.98486246255021,0.153461973288062,0.841980283299221,2.17836553734692,1.02341449813341,4.02134802859019,4.45254199334973,0.154209693802656,0,0,0,0,0,1.40354529212299,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,3.77774816196768,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,1.94970791705028,0,0.272999822815972,0.424216295861138,0,1.10273068709225,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0,0,0,4.85547561184627,0.658589785919804,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,2.23300811812344,1.19076871422421,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0.0674035438541849,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0.717149357331379,0,0,0.662091970365432,0,4.88699641578341,0.864221491201268,2.28611152076586,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0.758245587708239,0,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,1.13641803165053,0.50313580350515,0,0.915360273587694,0.302461847526478,0.466311601748341,0.591420599958536,0.159296767163702,0,0.155262956876259,5.39118070193112,1.06336685823198,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.818859587550484,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,3.34795516350076,3.69740502905135,2.16313281061895,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0.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| ||
|short_description=p19@SERPINE2 | |||
}} | }} |
Latest revision as of 00:54, 25 September 2015
Short description: | p19@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 202bp_to_ENST00000478966_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.41e-14 | 3 |
tendon cell | 2.41e-14 | 3 |
chorionic membrane mesenchymal stem cell | 3.15e-14 | 3 |
omentum preadipocyte | 7.66e-14 | 3 |
fibroblast of tunica adventitia of artery | 9.89e-11 | 4 |
fibroblast of the aortic adventitia | 9.89e-11 | 4 |
fibroblast | 1.14e-09 | 76 |
preadipocyte | 4.19e-09 | 12 |
stromal cell | 4.30e-09 | 28 |
GAG secreting cell | 2.51e-08 | 9 |
carbohydrate secreting cell | 2.51e-08 | 9 |
chondroblast | 2.34e-07 | 6 |
chondrocyte | 2.34e-07 | 6 |
multi fate stem cell | 7.53e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.41e-14 | 3 |
tendon | 2.41e-14 | 3 |
regular connective tissue | 2.41e-14 | 3 |
egg chorion | 3.15e-14 | 3 |
omentum | 3.26e-12 | 6 |
peritoneum | 3.26e-12 | 6 |
abdominal cavity | 3.26e-12 | 6 |
visceral peritoneum | 3.26e-12 | 6 |
artery wall | 9.89e-11 | 4 |
tunica adventitia of artery | 9.89e-11 | 4 |
adventitia | 9.89e-11 | 4 |
tunica adventitia of blood vessel | 9.89e-11 | 4 |
aorta tunica adventitia | 9.89e-11 | 4 |
aorta wall | 9.89e-11 | 4 |
perirenal fat | 1.53e-10 | 2 |
cavity lining | 2.90e-09 | 12 |
serous membrane | 2.90e-09 | 12 |
organ component layer | 2.43e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.95e-07 | 3 |
leiomyoma | 3.95e-07 | 3 |