FFCP PHASE1:Hg19::chr2:224849499..224849507,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:224849499..224849507,- to FFCP PHASE1:Hg19::chr2:224849499..224849507,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=277bp_to_ENST00000478966_5end | |||
|cluster_id=chr2:224849499..224849507,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_22_at_SERPINE2_5end | |||
|id=chr2:224849499..224849507,- | |||
|ontology_enrichment_celltype=CL:0000057!1.26e-17!75;CL:0000055!1.32e-17!180;CL:0002620!5.37e-14!23;CL:0000723!6.69e-08!436;CL:0000048!1.15e-07!430;CL:0000034!1.30e-07!444;CL:0000499!1.69e-07!27;CL:0002334!3.61e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000135;3.61e-20;3!CL:0000388;3.61e-20;3!CL:1000306;3.79e-15;4!CL:0002547;3.79e-15;4!CL:0000056;5.19e-15;4!CL:0002541;8.90e-10;3!CL:0002579;1.06e-09;3!CL:0000214;1.40e-09;3!CL:0000515;2.40e-09;3!CL:0002334;4.65e-09;12!CL:0000680;8.48e-09;7!CL:0002581;2.99e-08;1!CL:0002616;2.99e-08;1!CL:0000228;5.51e-08;1!CL:0002372;5.51e-08;1!CL:0000499;6.69e-08;28!CL:0000153;4.10e-07;9!CL:0000447;4.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.44e-20,3;CL:0000388,2.44e-20,3;CL:1000306,6.16e-15,4;CL:0002547,6.16e-15,4;CL:0000515,6.46e-15,4;CL:0000057,4.69e-10,76;CL:0002541,7.81e-10,3;CL:0000214,9.72e-10,3;CL:0002579,1.21e-09,3;CL:0002334,5.06e-09,12;CL:0002581,2.89e-08,1;CL:0002616,3.10e-08,1;CL:0000228,4.66e-08,1;CL:0002372,4.66e-08,1;CL:0000499,5.56e-08,28;CL:0000153,3.43e-07,9;CL:0000447,3.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;5.19e-15;4!UBERON:0003099;1.26e-07;1!UBERON:0003852;1.26e-07;1 | |||
|ontology_enrichment_disease=DOID:17!2.95e-07!5;DOID:450!2.95e-07!5;DOID:66!2.95e-07!5;DOID:423!2.95e-07!5;DOID:0080000!2.95e-07!5;DOID:11722!2.95e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.40e-09;3!DOID:127;1.40e-09;3!DOID:3369;1.26e-07;1!DOID:0060072;2.16e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.16e-09,3;DOID:127,1.16e-09,3;DOID:3369,7.97e-08,1;DOID:0060072,1.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!9.78e-10!40;UBERON:0002199!9.02e-09!45;UBERON:0002416!9.02e-09!45;UBERON:0000914!1.97e-07!83;UBERON:0002329!1.97e-07!83;UBERON:0003077!1.97e-07!83;UBERON:0003059!1.97e-07!83;UBERON:0007282!1.97e-07!83;UBERON:0009618!1.97e-07!83;UBERON:0007285!1.97e-07!83;UBERON:0000486!2.63e-07!82;UBERON:0004290!8.92e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.61e-20;3!UBERON:0000043;3.61e-20;3!UBERON:0007845;3.61e-20;3!UBERON:0004797;3.79e-15;4!UBERON:0000415;3.79e-15;4!UBERON:0007240;3.79e-15;4!UBERON:0005742;3.79e-15;4!UBERON:0005734;3.79e-15;4!UBERON:0004664;3.79e-15;4!UBERON:0004663;3.79e-15;4!UBERON:0005406;8.41e-15;2!UBERON:0004457;8.91e-12;9!UBERON:0000042;8.91e-12;9!UBERON:0003124;8.90e-10;3!UBERON:0000920;8.90e-10;3!UBERON:0006915;1.40e-09;3!UBERON:0007616;1.40e-09;3!UBERON:0002217;1.40e-09;3!UBERON:0002018;1.40e-09;3!UBERON:0005705;1.26e-07;1!UBERON:0008193;1.26e-07;1!UBERON:0010912;1.26e-07;1!UBERON:0002514;1.26e-07;1!UBERON:0003457;1.26e-07;1!UBERON:0008907;1.26e-07;1!UBERON:0008001;1.26e-07;1!UBERON:0007213;1.26e-07;1!UBERON:0009891;1.26e-07;1!UBERON:0007914;1.26e-07;1!UBERON:0007375;1.26e-07;1!UBERON:0003323;1.26e-07;1!UBERON:0010258;1.26e-07;1!UBERON:0005253;1.26e-07;1!UBERON:0007842;1.26e-07;1!UBERON:0002397;1.26e-07;1!UBERON:0003113;1.26e-07;1!UBERON:0003277;1.26e-07;1!UBERON:0001709;1.26e-07;1!UBERON:0002244;1.26e-07;1!UBERON:0005620;1.26e-07;1!UBERON:0010364;1.26e-07;1!UBERON:0004288;1.26e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.44e-20,3;UBERON:0000043,2.44e-20,3;UBERON:0007845,2.44e-20,3;UBERON:0000415,6.16e-15,4;UBERON:0007240,6.16e-15,4;UBERON:0005742,6.16e-15,4;UBERON:0005734,6.16e-15,4;UBERON:0004664,6.16e-15,4;UBERON:0004663,6.16e-15,4;UBERON:0005406,8.43e-15,2;UBERON:0000920,7.81e-10,3;UBERON:0006915,9.72e-10,3;UBERON:0007616,9.72e-10,3;UBERON:0002217,9.72e-10,3;UBERON:0002018,9.72e-10,3;UBERON:0004457,6.51e-09,12;UBERON:0000042,6.51e-09,12;UBERON:0004797,9.33e-09,7;UBERON:0005705,1.75e-07,1;UBERON:0008193,1.75e-07,1;UBERON:0010912,1.75e-07,1;UBERON:0002514,1.75e-07,1;UBERON:0003457,1.75e-07,1;UBERON:0008907,1.75e-07,1;UBERON:0008001,1.75e-07,1;UBERON:0007213,1.75e-07,1;UBERON:0009891,1.75e-07,1;UBERON:0007914,1.75e-07,1;UBERON:0009292,1.75e-07,1;UBERON:0003099,1.75e-07,1;UBERON:0007375,1.75e-07,1;UBERON:0003323,1.75e-07,1;UBERON:0010258,1.75e-07,1;UBERON:0007842,1.75e-07,1;UBERON:0009494,1.75e-07,1;UBERON:0010042,1.75e-07,1;UBERON:0010045,1.75e-07,1;UBERON:0010259,1.75e-07,1;UBERON:0010359,1.75e-07,1;UBERON:0009526,1.75e-07,1;UBERON:0002397,1.75e-07,1;UBERON:0003113,1.75e-07,1;UBERON:0003277,1.75e-07,1;UBERON:0001709,1.75e-07,1;UBERON:0004066,1.75e-07,1;UBERON:0002244,1.75e-07,1;UBERON:0005620,1.75e-07,1;UBERON:0004362,1.75e-07,1;UBERON:0010364,1.75e-07,1;UBERON:0010046,1.75e-07,1;UBERON:0005868,1.75e-07,1;UBERON:0007238,1.75e-07,1;UBERON:0004288,1.75e-07,1;UBERON:0004068,1.75e-07,1;UBERON:0010334,1.75e-07,1;UBERON:0003852,1.75e-07,1;UBERON:0010253,1.75e-07,1 | |||
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| ||
|short_description=p22@SERPINE2 | |||
}} | }} |
Latest revision as of 00:53, 25 September 2015
Short description: | p22@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 277bp_to_ENST00000478966_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.44e-20 | 3 |
tendon cell | 2.44e-20 | 3 |
fibroblast of tunica adventitia of artery | 6.16e-15 | 4 |
fibroblast of the aortic adventitia | 6.16e-15 | 4 |
skeletal muscle myoblast | 6.46e-15 | 4 |
fibroblast | 4.69e-10 | 76 |
chorionic membrane mesenchymal stem cell | 7.81e-10 | 3 |
synovial cell | 9.72e-10 | 3 |
omentum preadipocyte | 1.21e-09 | 3 |
preadipocyte | 5.06e-09 | 12 |
perirenal preadipocyte | 2.89e-08 | 1 |
perirenal adipocyte cell | 3.10e-08 | 1 |
multinucleate cell | 4.66e-08 | 1 |
myotube | 4.66e-08 | 1 |
stromal cell | 5.56e-08 | 28 |
GAG secreting cell | 3.43e-07 | 9 |
carbohydrate secreting cell | 3.43e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.16e-09 | 3 |
leiomyoma | 1.16e-09 | 3 |
peripheral primitive neuroectodermal tumor | 7.97e-08 | 1 |
benign neoplasm | 1.87e-07 | 4 |