FFCP PHASE1:Hg19::chr2:216237128..216237139,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:216237128..216237139,- to FFCP PHASE1:Hg19::chr2:216237128..216237139,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000485567_5end | |||
|cluster_id=chr2:216237128..216237139,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_79_at_FN1_5end | |||
|id=chr2:216237128..216237139,- | |||
|ontology_enrichment_celltype=CL:0000055!4.04e-18!180;CL:0000057!7.10e-14!75;CL:0000188!7.94e-11!9;CL:0002620!1.29e-08!23;CL:0000048!1.37e-08!430;CL:0000723!3.52e-08!436;CL:0000034!1.17e-07!444;CL:0002371!1.44e-07!591;CL:1000306!1.62e-07!4;CL:0002547!1.62e-07!4;CL:0002334!2.15e-07!12;CL:0000680!2.70e-07!57;CL:0000056!2.70e-07!57;CL:0000355!2.70e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.23e-12;23!CL:1000306;3.07e-09;4!CL:0002547;3.07e-09;4!CL:0000228;3.39e-09;1!CL:0002372;3.39e-09;1!CL:0000737;5.62e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.28e-12,23;CL:0000057,6.31e-11,76;CL:0000228,3.00e-09,1;CL:0002372,3.00e-09,1;CL:1000306,3.54e-09,4;CL:0002547,3.54e-09,4;CL:0000737,4.69e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.43e-09;1!DOID:3369;3.39e-09;1!DOID:3571;3.39e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.43e-09,1;DOID:3369,2.35e-09,1;DOID:3571,2.55e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000415!1.62e-07!4;UBERON:0007240!1.62e-07!4;UBERON:0005742!1.62e-07!4;UBERON:0005734!1.62e-07!4;UBERON:0004664!1.62e-07!4;UBERON:0004663!1.62e-07!4;UBERON:0002199!5.06e-07!45;UBERON:0002416!5.06e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.88e-09;41!UBERON:0004797;3.07e-09;4!UBERON:0000415;3.07e-09;4!UBERON:0007240;3.07e-09;4!UBERON:0005742;3.07e-09;4!UBERON:0005734;3.07e-09;4!UBERON:0004664;3.07e-09;4!UBERON:0004663;3.07e-09;4!UBERON:0002199;3.51e-08;46!UBERON:0002416;3.51e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.73e-11,41;UBERON:0002199,4.00e-10,46;UBERON:0002416,4.00e-10,46;UBERON:0000415,3.54e-09,4;UBERON:0007240,3.54e-09,4;UBERON:0005742,3.54e-09,4;UBERON:0005734,3.54e-09,4;UBERON:0004664,3.54e-09,4;UBERON:0004663,3.54e-09,4 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0.722878304769133,0,0.289693037921647,0.795285947051099,5.35298357332899,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,3.57504788195691,2.0078563452417,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0,0.454072282934794,0,0,0.312160076830321,0,1.19558944441441,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,1.4351170855109,0,0.635795703478686,0.900273288253207,0.309157587715317,2.06112432036503,0,2.02531598689519,0,2.27190396819703,0.184099797284599,0.323292113637624,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.831883446123229,0.892144943985809,0.946214490203608,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,2.30192959932094,0.280660094433074,0,0,0.160853921143607,0,0.616838775210622,0.355123450626254,0.739144404124282,0,0.116210378459959,0,0.802025881213139,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,1.07834031980251,0.307007349452259,0.413509717453592,0.322260734604821,0.435050081742686,0.340906509664404,0.178064071293475,0,0.192190067365106,1.02090169995667,0,0.464845549297286,6.2962469366128,0,0,0,0,0.18532421910392,0,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0.183195186803725,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,1.16856654923612,0,0.378806010550178,0.754703705257725,0,0,0.302461847526478,0.621748802331122,0.147855149989634,0,0,0.621051827505038,0.414706207840855,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0.212574920101683,0.247871528518004,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0.722878304769133,0,0.289693037921647,0.795285947051099,5.35298357332899,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,3.57504788195691,2.0078563452417,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0,0.454072282934794,0,0,0.312160076830321,0,1.19558944441441,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,1.4351170855109,0,0.635795703478686,0.900273288253207,0.309157587715317,2.06112432036503,0,2.02531598689519,0,2.27190396819703,0.184099797284599,0.323292113637624,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.831883446123229,0.892144943985809,0.946214490203608,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,2.30192959932094,0.280660094433074,0,0,0.160853921143607,0,0.616838775210622,0.355123450626254,0.739144404124282,0,0.116210378459959,0,0.802025881213139,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,1.07834031980251,0.307007349452259,0.413509717453592,0.322260734604821,0.435050081742686,0.340906509664404,0.178064071293475,0,0.192190067365106,1.02090169995667,0,0.464845549297286,6.2962469366128,0,0,0,0,0.18532421910392,0,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0.183195186803725,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,1.16856654923612,0,0.378806010550178,0.754703705257725,0,0,0.302461847526478,0.621748802331122,0.147855149989634,0,0,0.621051827505038,0.414706207840855,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0.212574920101683,0.247871528518004,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p79@FN1 | |||
}} | }} |
Latest revision as of 02:02, 20 September 2015
Short description: | p79@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_79_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 22bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.28e-12 | 23 |
fibroblast | 6.31e-11 | 76 |
multinucleate cell | 3.00e-09 | 1 |
myotube | 3.00e-09 | 1 |
fibroblast of tunica adventitia of artery | 3.54e-09 | 4 |
fibroblast of the aortic adventitia | 3.54e-09 | 4 |
striated muscle cell | 4.69e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.73e-11 | 41 |
integument | 4.00e-10 | 46 |
integumental system | 4.00e-10 | 46 |
artery wall | 3.54e-09 | 4 |
tunica adventitia of artery | 3.54e-09 | 4 |
adventitia | 3.54e-09 | 4 |
tunica adventitia of blood vessel | 3.54e-09 | 4 |
aorta tunica adventitia | 3.54e-09 | 4 |
aorta wall | 3.54e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.43e-09 | 1 |
peripheral primitive neuroectodermal tumor | 2.35e-09 | 1 |
liver cancer | 2.55e-09 | 1 |