FFCP PHASE1:Hg19::chr2:189157579..189157590,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:189157579..189157590,+ to FFCP PHASE1:Hg19::chr2:189157579..189157590,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51454 | |EntrezGene=51454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18649 | |HGNC=18649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000409637_5end | |||
|cluster_id=chr2:189157579..189157590,+ | |||
|coexpression_cluster_id=C1267 | |||
|description=CAGE_peak_9_at_GULP1_5end | |||
|id=chr2:189157579..189157590,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.30e-07!254;CL:0000710!4.15e-07!20;CL:0000075!6.94e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.13e-18;5!CL:0002321;3.26e-09;15!CL:0000540;5.54e-09;6!CL:0000404;5.54e-09;6!CL:0000075;7.34e-07;27!CL:0000511;8.23e-07;1!CL:0002625;8.23e-07;1!CL:0000216;8.23e-07;1!CL:0000710;9.37e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.83e-18,5;CL:0000540,3.62e-09,6;CL:0000031,3.62e-09,6;CL:0000404,3.62e-09,6;CL:0000133,2.38e-07,59;CL:0000047,5.58e-07,8;CL:0000511,6.02e-07,1;CL:0002625,6.02e-07,1;CL:0000216,6.02e-07,1;CL:0000075,7.36e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000031;5.54e-09;6!UBERON:0003124;2.22e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.67e-10!143;DOID:305!3.55e-09!106;DOID:299!1.78e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.34e-12;2!DOID:3493;2.34e-12;2!DOID:3369;3.26e-07;1!DOID:3347;8.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.67e-12,2;DOID:3493,3.31e-12,2;DOID:3369,2.66e-07,1;DOID:3347,8.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005156!2.66e-09!59;UBERON:0000990!2.66e-09!59;UBERON:0004122!1.40e-07!15;UBERON:0005153!5.08e-07!37;UBERON:0003101!7.26e-07!22;UBERON:0000079!7.26e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.23e-07;1!UBERON:0001343;8.23e-07;1!UBERON:0004913;8.23e-07;1!UBERON:0003703;8.23e-07;1!UBERON:0004910;8.23e-07;1!UBERON:0004813;8.23e-07;1!UBERON:0001174;8.23e-07;1!UBERON:0004914;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.02e-07,1;UBERON:0001343,6.02e-07,1;UBERON:0004910,6.02e-07,1;UBERON:0005154,6.02e-07,1;UBERON:0005295,6.02e-07,1;UBERON:0004813,6.02e-07,1;UBERON:0005297,6.02e-07,1;UBERON:0005294,6.02e-07,1;UBERON:0010141,6.02e-07,1;UBERON:0005891,6.02e-07,1;UBERON:0004913,9.51e-07,1;UBERON:0003703,9.51e-07,1;UBERON:0001174,9.51e-07,1;UBERON:0004914,9.51e-07,1 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.527008714158756,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,2.98183171017191,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.421352420106746,0,0.245668634623536,0,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,2.19552671033272,1.06023814657188,0.348581828608555,1.55491582523056,2.27088765788066,0.72995471815166,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0.300343057843917,1.14330573052231,0,0,0,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.831883446123229,1.24900292158013,1.41932173530541,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.896974044789907,0,0,0,0,0,0.246381468041427,0.519254429183621,0,0.362578348774867,0,0.184161977871793,0.114814448164607,0.910455840033585,0.524497659837696,0.902399225814824,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,1.66215201785745,0,0,0,0.512900250232778,0,0.325378394664303,3.50339439602256,0.732555718546747,0.907604499126468,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.731140468893853,0,0.545999645631943,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0.242721043499027,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0,0,0,0.276283915531148,0.503865495708552,0.102268682502155,0,0,0.0898683511473268,14.1426727993731,0,0.295930216910801,0,0,0,0,1.99613798001194,0.520855522170466,0,0.724999575434793,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0.269272933229316,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0.392125068635479,0,0,0,2.53197677433632,1.63232808159148,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0.661983911750998,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0.400794101257669,0.213452994739353,0.39961921916426,0.432271251462318,0,1.37275998289572,0,0,0,0.543616824294456,0.313808538937,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78741985211799,0,0,0,2.41129722697529,1.92555211236127,1.66176135211674,0.2249738915515,0,0,0,0,0.209818352539992,0,0.179287339332845,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0.113312091520126,0,0,0,0.13223260174269,2.56630256826494,0,0.427149650270779,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,2.57803499820801,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0.63718706865481,0,0,1.24411862352257,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,1.15761237161917,0,0.537266523244462,0,0.219284049578707,0,0.192914038270915,0,0.512483037175893,0,0.303859956177382,0.138258436151731,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0.368211900503681,0,0,1.53473245564382,0.754773679776773,0,0.54604819096007,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,1.3807198521202,0,0,0,1.56302802246618,0.261906694481422,0,1.33070477595341,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,8.07191568480013,0,0,0.40781839786099,0,0.472775363535873,0.778619813244484,0.078493092850514,0,0,0,0,0,0.714765441766563,0,1.97610423125813,0,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0.93061915699296,0.955538938977433,0.111855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| ||
|short_description=p9@GULP1 | |||
}} | }} |
Latest revision as of 00:51, 19 September 2015
Short description: | p9@GULP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GULP1_5end |
Coexpression cluster: | C1267_bile_placenta_lung_iPS_H9_clear_melanoma |
Association with transcript: | 13bp_to_ENST00000409637_5end |
EntrezGene: | GULP1 |
HGNC: | 18649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.83e-18 | 5 |
neuron | 3.62e-09 | 6 |
neuroblast | 3.62e-09 | 6 |
electrically signaling cell | 3.62e-09 | 6 |
neurectodermal cell | 2.38e-07 | 59 |
neuronal stem cell | 5.58e-07 | 8 |
androgen binding protein secreting cell | 6.02e-07 | 1 |
seminiferous tubule epithelial cell | 6.02e-07 | 1 |
Sertoli cell | 6.02e-07 | 1 |
columnar/cuboidal epithelial cell | 7.36e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.02e-07 | 1 |
seminiferous tubule of testis | 6.02e-07 | 1 |
epithelium of male gonad | 6.02e-07 | 1 |
epithelial cord | 6.02e-07 | 1 |
sex cord | 6.02e-07 | 1 |
seminiferous tubule epithelium | 6.02e-07 | 1 |
testis sex cord | 6.02e-07 | 1 |
genital ridge | 6.02e-07 | 1 |
primitive sex cord of indifferent gonad | 6.02e-07 | 1 |
coelomic epithelium | 6.02e-07 | 1 |
hepatopancreatic ampulla | 9.51e-07 | 1 |
extrahepatic bile duct | 9.51e-07 | 1 |
common bile duct | 9.51e-07 | 1 |
duodenal papilla | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.67e-12 | 2 |
signet ring cell adenocarcinoma | 3.31e-12 | 2 |
peripheral primitive neuroectodermal tumor | 2.66e-07 | 1 |
osteosarcoma | 8.49e-07 | 1 |