FFCP PHASE1:Hg19::chr2:174025063..174025089,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:174025063..174025089,+ to FFCP PHASE1:Hg19::chr2:174025063..174025089,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51776 | |EntrezGene=51776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=325bp_to_ENST00000480606_5end | |||
|cluster_id=chr2:174025063..174025089,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_ZAK_5end | |||
|id=chr2:174025063..174025089,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.75e-20!45;CL:0002057!7.32e-19!42;CL:0002194!4.52e-13!63;CL:0000576!4.52e-13!63;CL:0000040!4.52e-13!63;CL:0000559!4.52e-13!63;CL:0002009!2.85e-12!65;CL:0000766!2.44e-11!76;CL:0000839!1.69e-10!70;CL:0000557!3.53e-10!71;CL:0000048!1.11e-07!430;CL:0000723!4.09e-07!436;CL:0000034!9.49e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.61e-40;33!CL:0002057;5.61e-40;33!CL:0000473;6.62e-27;39!CL:0000234;6.62e-27;39!CL:0000576;1.64e-21;48!CL:0000766;3.07e-13;69!CL:0000188;1.98e-10;9!CL:0000594;6.62e-09;3!CL:0002087;7.41e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.89e-42,42;CL:0002057,1.89e-42,42;CL:0000473,3.96e-36,48;CL:0000234,3.96e-36,48;CL:0002194,1.40e-29,59;CL:0000576,1.40e-29,59;CL:0000040,1.40e-29,59;CL:0000559,1.40e-29,59;CL:0002009,2.32e-28,61;CL:0000839,1.24e-25,66;CL:0000557,3.88e-25,67;CL:0000766,7.32e-23,72;CL:0000763,9.52e-13,108;CL:0000049,9.52e-13,108;CL:0002087,1.52e-12,115;CL:0002031,9.34e-11,120;CL:0000188,1.99e-10,9;CL:0000738,1.77e-09,136;CL:0000594,6.92e-09,3;CL:0000048,9.76e-08,427;CL:0000034,1.46e-07,441;CL:0000723,1.92e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.77e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.27e-16!167;UBERON:0002371!1.17e-10!80;UBERON:0004765!1.83e-10!101;UBERON:0001434!1.83e-10!101;UBERON:0001474!5.26e-09!86;UBERON:0000486!4.16e-07!82;UBERON:0000926!5.27e-07!448;UBERON:0004120!5.27e-07!448;UBERON:0006603!5.27e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.72e-07;16!UBERON:0002036;2.72e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,1.27e-29,90;UBERON:0002371,1.55e-26,76;UBERON:0001434,1.10e-25,100;UBERON:0001474,5.61e-24,82;UBERON:0002204,8.25e-24,167;UBERON:0002405,3.80e-20,93;UBERON:0002390,4.22e-20,98;UBERON:0003061,4.22e-20,98;UBERON:0002193,1.91e-17,108;UBERON:0000926,5.14e-13,315;UBERON:0004120,5.14e-13,315;UBERON:0006603,5.14e-13,315;UBERON:0003081,6.89e-11,203;UBERON:0002384,3.86e-07,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.89515962028049,0,0,0,0,0,1.23766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,6.09394949385065,2.00544447470142,2.60413044859022,0,0,0,0.581592955118259,1.13362783106643,0,3.25400651667958,0.411167888021826,3.71647645074124,13.2338500468189,3.84241059793651,16.0807916324238,102.044721498039,49.0568359523708,50.1078000399065,1.88242339542605,1.36453075028923,1.34834090667051,182.732083745429,109.115869205872,93.34322036666,0.329851300186716,0.598390972864896,0,146.555665507435,79.4339314567596,92.8005151003407,5.7787193009051,4.69334626578181,5.86409880703815,78.0965358397046,139.208946403299,107.597211729901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,1.8672662123986,0.134710672069688,0.490385709340376,0,0.576175924479999,0,4.05808099879417,0,0.298897361103602,0.704606991862589,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.625592599359821,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.412210116953756,0.257640540045629,0,0,0.292311015483596,0.504867548488229,0.184099797284599,0.161646056818812,0,0,0,0.57978255948989,1.63647672354501,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,4.68669169933885,0,3.40260233381728,2.32852159027406,2.03443756959773,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,1.10007428731425,0,0,0,0,0,0,0,0.532844358032199,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,1.64381058040307,0.537182889719687,0,0.197030760201927,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,1.2269149171914,1.00034104211935,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.737476674166813,1.91143951829782,0,0,0,0,1.49418580924822,0,0,0,0,0,0,0.128139149255701,0,0,0,2.62156479464514,1.06537035187876,3.44934055257998,0.519254429183621,0.813472649219715,0,0.200506470303285,0,0.229628896329213,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0.574265537996172,0,1.6068392984416,0.290012154876366,3.23502095940753,2.91656981979646,2.34322173223702,4.51165028446749,2.17525040871343,2.64202544989913,0.178064071293475,0.661139661443912,0.192190067365106,1.40373983744043,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,1.59101623962968,0,0,0,0.471249609382746,0.404364963146632,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0.717056761020258,0.0982490410131212,0,3.54761064070598,0.211107635297664,0.987884678879706,0,0,0.48111056362756,0,0,0.188287601553558,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0.687944129886466,0.387025325156341,0.365446585430928,0.492692742319255,0,0,0,0,2.58328995213887,0,0,0.400794101257669,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,2.15361907373044,1.59743200399193,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,1.43429871466276,0,0,1.98627591109629,0,0.542999601753713,0.864221491201268,0,0,0,2.72620834856675,0,0,0,0.258565912723101,0,0.513260513652988,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0.638341257770182,0,0.7520696820681,0,0.655745261419609,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,1.94031243752936,0.233713309847224,2.77402930751307,1.89403005275089,1.0062716070103,1.77962244319307,1.14420034198462,0.302461847526478,0.932623203496683,1.62640664988597,0.318593534327405,0,0,1.24411862352257,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,3.7104720648635,1.3503982678964,1.8583668471838,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,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| ||
|short_description=p5@ZAK | |||
}} | }} |
Latest revision as of 06:25, 18 September 2015
Short description: | p5@ZAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZAK_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 325bp_to_ENST00000480606_5end |
EntrezGene: | ZAK |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.89e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-42 | 42 |
defensive cell | 3.96e-36 | 48 |
phagocyte | 3.96e-36 | 48 |
monopoietic cell | 1.40e-29 | 59 |
monocyte | 1.40e-29 | 59 |
monoblast | 1.40e-29 | 59 |
promonocyte | 1.40e-29 | 59 |
macrophage dendritic cell progenitor | 2.32e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.24e-25 | 66 |
granulocyte monocyte progenitor cell | 3.88e-25 | 67 |
myeloid leukocyte | 7.32e-23 | 72 |
myeloid cell | 9.52e-13 | 108 |
common myeloid progenitor | 9.52e-13 | 108 |
nongranular leukocyte | 1.52e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 9.34e-11 | 120 |
cell of skeletal muscle | 1.99e-10 | 9 |
leukocyte | 1.77e-09 | 136 |
skeletal muscle satellite cell | 6.92e-09 | 3 |
multi fate stem cell | 9.76e-08 | 427 |
stem cell | 1.46e-07 | 441 |
somatic stem cell | 1.92e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 1.27e-29 | 90 |
bone marrow | 1.55e-26 | 76 |
skeletal system | 1.10e-25 | 100 |
bone element | 5.61e-24 | 82 |
musculoskeletal system | 8.25e-24 | 167 |
immune system | 3.80e-20 | 93 |
hematopoietic system | 4.22e-20 | 98 |
blood island | 4.22e-20 | 98 |
hemolymphoid system | 1.91e-17 | 108 |
mesoderm | 5.14e-13 | 315 |
mesoderm-derived structure | 5.14e-13 | 315 |
presumptive mesoderm | 5.14e-13 | 315 |
lateral plate mesoderm | 6.89e-11 | 203 |
connective tissue | 3.86e-07 | 371 |