FFCP PHASE1:Hg19::chr2:16080659..16080685,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:16080659..16080685,+ to FFCP PHASE1:Hg19::chr2:16080659..16080685,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt=P04198,B4DRZ1,Q53XS5 | |UniProt=P04198,B4DRZ1,Q53XS5 | ||
|association_with_transcript=0bp_to_ENST00000281043,ENST00000426211,NM_005378,uc002rci.2_5end | |||
|cluster_id=chr2:16080659..16080685,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_1_at_MYCN_5end | |||
|id=chr2:16080659..16080685,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.84e-07!8;CL:0000039!3.79e-07!7;CL:0000586!3.79e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.84e-09;7!CL:0000586;5.84e-09;7!CL:0000540;1.04e-07;6!CL:0000404;1.04e-07;6!CL:0002322;8.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.25e-09,8;CL:0000039,5.86e-09,7;CL:0000586,5.86e-09,7;CL:0000540,1.04e-07,6;CL:0000031,1.04e-07,6;CL:0000404,1.04e-07,6;CL:0002322,8.52e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-08;82!CL:0000031;1.04e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!6.26e-10!22;DOID:2994!6.26e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.81e-10;22!DOID:2994;1.81e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.46e-10,22;DOID:2994,1.46e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.67e-28!94;UBERON:0001016!2.67e-28!94;UBERON:0005743!1.10e-26!86;UBERON:0001017!2.99e-26!82;UBERON:0007023!1.11e-24!115;UBERON:0001049!4.32e-23!57;UBERON:0005068!4.32e-23!57;UBERON:0006241!4.32e-23!57;UBERON:0007135!4.32e-23!57;UBERON:0002346!1.12e-20!90;UBERON:0003075!5.18e-20!86;UBERON:0007284!5.18e-20!86;UBERON:0002780!2.23e-19!41;UBERON:0001890!2.23e-19!41;UBERON:0006240!2.23e-19!41;UBERON:0000955!6.89e-19!69;UBERON:0006238!6.89e-19!69;UBERON:0002616!8.81e-19!59;UBERON:0001893!1.18e-18!34;UBERON:0003080!1.56e-18!42;UBERON:0002020!1.77e-18!34;UBERON:0003528!1.77e-18!34;UBERON:0002791!3.86e-18!33;UBERON:0001869!1.91e-17!32;UBERON:0000924!1.87e-16!173;UBERON:0006601!1.87e-16!173;UBERON:0004121!9.09e-16!169;UBERON:0003056!3.09e-15!61;UBERON:0000956!7.43e-14!25;UBERON:0000203!7.43e-14!25;UBERON:0002619!2.84e-12!22;UBERON:0001950!1.99e-11!20;UBERON:0000153!3.14e-10!129;UBERON:0007811!3.14e-10!129;UBERON:0000033!1.92e-09!123;UBERON:0000064!3.44e-09!219;UBERON:0005631!6.16e-07!14;UBERON:0000158!6.16e-07!14;UBERON:0000025!7.52e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.94e-21;34!UBERON:0003528;9.12e-21;34!UBERON:0002020;9.12e-21;34!UBERON:0002791;1.42e-20;32!UBERON:0001869;1.45e-20;32!UBERON:0002780;1.45e-18;41!UBERON:0001890;1.45e-18;41!UBERON:0000956;9.79e-18;25!UBERON:0000203;9.79e-18;25!UBERON:0002619;1.33e-15;22!UBERON:0000073;8.70e-15;53!UBERON:0002616;8.70e-15;53!UBERON:0001950;1.91e-14;20!UBERON:0000955;2.47e-10;68!UBERON:0001016;3.58e-10;83!UBERON:0000922;4.84e-10;49!UBERON:0001017;1.11e-09;75!UBERON:0000125;1.21e-07;9!UBERON:0002308;1.21e-07;9!UBERON:0002420;2.87e-07;9!UBERON:0007245;2.87e-07;9!UBERON:0010009;2.87e-07;9!UBERON:0010011;2.87e-07;9!UBERON:0000454;2.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.38e-31,89;UBERON:0001017,1.15e-29,81;UBERON:0001049,1.08e-26,56;UBERON:0005068,1.08e-26,56;UBERON:0006241,1.08e-26,56;UBERON:0007135,1.08e-26,56;UBERON:0000073,7.54e-26,53;UBERON:0002616,7.54e-26,53;UBERON:0002780,1.36e-25,41;UBERON:0001890,1.36e-25,41;UBERON:0003080,1.36e-25,41;UBERON:0006240,1.36e-25,41;UBERON:0001893,3.45e-24,34;UBERON:0003528,5.92e-24,34;UBERON:0002020,5.92e-24,34;UBERON:0002346,2.86e-23,86;UBERON:0003075,6.68e-23,82;UBERON:0007284,6.68e-23,82;UBERON:0002791,1.24e-22,32;UBERON:0001869,1.38e-22,32;UBERON:0000955,3.34e-21,68;UBERON:0006238,3.34e-21,68;UBERON:0003056,1.08e-20,61;UBERON:0004121,5.93e-19,171;UBERON:0000924,5.93e-19,171;UBERON:0006601,5.93e-19,171;UBERON:0007023,1.66e-18,114;UBERON:0000956,7.91e-18,25;UBERON:0000203,7.91e-18,25;UBERON:0002619,9.86e-16,22;UBERON:0010371,5.36e-15,104;UBERON:0001950,1.29e-14,20;UBERON:0011216,9.45e-14,223;UBERON:0010314,2.90e-12,132;UBERON:0005631,4.18e-09,14;UBERON:0000158,4.18e-09,14;UBERON:0000125,1.43e-07,9;UBERON:0002308,1.43e-07,9;UBERON:0002420,2.60e-07,9;UBERON:0007245,2.60e-07,9;UBERON:0010009,2.60e-07,9;UBERON:0010011,2.60e-07,9;UBERON:0000454,2.60e-07,9;UBERON:0003124,2.99e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,1.96587149201207,2.09340350391728,7.42700665242586,5.01157258634062,0,0,0,0,0,0,0.861847406537515,0,0.313454721478088,8.87331560106276,2.05311637609326,5.90050406095573,0,0,0,0.786728553697808,1.15148819429164,1.08371286321253,0,0,0,0,0,29.6536443728196,0,0.200544447470142,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.686258716337,45.4011936015044,9.48182705190277,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.60709189178915,0.665188192387692,0.87834785693126,3.86388272718252,0,0,0,0,0,0.476981248610684,0,0.371457501329565,1.39133685156694,2.58070378531837,2.08284300964557,1.69592382577203,0,0,0.208994966536811,0.775250277507987,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,1.22031028774085,0,0,1.07159673940896,0.44905874525234,2.70267553159973,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8360592511378,38.3011030449092,39.7383284613753,36.385030310395,43.1468654997325,9.85438869504741,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,29.0252714961748,1.20097467208968,0,0,0,0,0,0,0,9.04257158805599,0,0.288732895522148,0,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,3.31724984865235,1.15295962733569,1.00993946741104,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55732473911449,44.2475503115914,54.1302168944387,47.9096518856237,26.1554888177797,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,1.02943027143257,0,0,0.106727557803444,3.94065842880137,4.99306318531491,9.67648938654977,0,0,0,0,0,0,0,0,0,0,0,0,67.8021512209001,0.200506470303285,0,0,0,0,3.60959690325929,0.693138033939733,0,1.46139224653261,0.105551628892876,0,0,0.431831832204279,3.08454505380579,0,0.501689773854853,0,0,0,0,0,0.512900250232778,7.87235149679294,0,2.7821073144885,0,0,0,0,0,3.48014585851639,0,0.460511024178389,0.137836572484531,0,0.145016693914229,0.170453254832202,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,18.1745950910857,13.7709766288643,118.15881337167,42.5463901275005,0.649243880549111,33.4148641955016,0,0,32.5824820217087,42.3229444504008,0,0,0,0,0,0,0,0,0,0,9.19549306818343,58.9537383356141,0,0.37428108081644,0.146508179271894,0,1.33732061132974,0,8.59480145055684,3.8605408508243,11.0577852755724,1.9882952955326,3.09472716103128,0,0,88.0392951893733,0.597743964753209,2.21027132424918,0,0.306806047506464,0,0,0,0,0,0.493217028184668,0,0,2.90799823828566,4.91670920257812,37.9266216202269,0,0.524759999977174,0,0,0,0.236387681767936,168.234766141835,2.33283690706603,0.694499979733169,5.31444831488303,3.61789315876224,3.05163472634166,0.331737779793674,0.886642856860642,1.53569778007781,0,1.95193241990045,1.76985594558733,0,214.424431080896,224.48386866884,10.1042055887468,5.74202087517455,5.77064838431733,9.06159119231679,0,0,0,0,0,0,0,0.158936578980379,0,0,21.2029607150911,21.6388639742091,0.995261931078505,0.530745387020035,2.4441205797345,0,0,0.104421949505455,9.03175181941072,0.802577647298789,4.45102446878144,0,0,0,0,4.83962864194656,115.389431134695,1.20054501294127,0.300646838828985,0.518440956986236,0,0,0,0,0,0,7.11594927174037,0,0,1.04836000945218,0,0,0,0,0.678923115418936,0,2.48578814858586,0,0,2.91229661397042,43.0213042016567,0,2.13452994739353,3.79638258206047,0,0,0.343189995723929,0,0,0.471388069233591,0,0.104602846312333,0,0,6.00420288709789,3.01191833562385,3.83239764200917,0,4.73197237702766,3.6306712165393,1.3749625440701,2.15361907373044,3.19486400798386,0,1.11585728720936,5.30749432645137,0,1.16495949527454,0.0787831823072236,0,0,0.0984274815147488,0,3.18091875923721,2.45166131000836,24.4344785666829,33.8347014029195,30.3271446761305,0,0,2.97672827624321,0,1.89133697518076,15.2118305591495,0.105600336519406,1.25501137532991,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,8.01554329441613,2.11572162788304,0,0,0.106787412567695,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,1.77213635993397,3.17268288745104,1.1267183763585,2.86704597845036,2.3295100822739,5.15400144413483,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0,0.465788870628778,0,0,1.5652351854352,0,0,1.62748293281865,0,2.90008504014719,0,0.796191777397232,0,0,0,1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| ||
|short_description=p1@MYCN | |||
}} | }} |
Latest revision as of 19:18, 17 September 2015
Short description: | p1@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_ENST00000281043, ENST00000426211, NM_005378, uc002rci.2_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | P04198B4DRZ1Q53XS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.25e-09 | 8 |
germ line cell | 5.86e-09 | 7 |
germ cell | 5.86e-09 | 7 |
neuron | 1.04e-07 | 6 |
neuroblast | 1.04e-07 | 6 |
electrically signaling cell | 1.04e-07 | 6 |
embryonic stem cell | 8.52e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.46e-10 | 22 |
germ cell cancer | 1.46e-10 | 22 |