FFCP PHASE1:Hg19::chr2:158114478..158114500,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:158114478..158114500,+ to FFCP PHASE1:Hg19::chr2:158114478..158114500,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11227 | |EntrezGene=11227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |HGNC=4127 | ||
|TSSclassifier=strong | |||
|UniProt=A5PKZ1,Q7Z7M9 | |UniProt=A5PKZ1,Q7Z7M9 | ||
|association_with_transcript=138bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |||
|cluster_id=chr2:158114478..158114500,+ | |||
|coexpression_cluster_id=C1496 | |||
|description=CAGE_peak_3_at_GALNT5_5end | |||
|id=chr2:158114478..158114500,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.31e-21!180;CL:0000057!1.78e-12!75;CL:0000680!1.09e-11!57;CL:0000056!1.09e-11!57;CL:0000355!1.09e-11!57;CL:0000192!1.09e-10!42;CL:0000514!1.09e-10!42;CL:0000187!2.77e-10!54;CL:0000359!7.82e-10!32;CL:0000393!3.73e-09!60;CL:0000211!3.73e-09!60;CL:0002620!1.22e-08!23;CL:0000183!3.06e-08!59;CL:0002371!3.88e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.29e-10;23!CL:0000359;6.55e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.02e-15,76;CL:0002620,6.07e-10,23;CL:0000359,5.43e-07,32;CL:0000723,5.52e-07,433;CL:0000048,7.67e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.21e-07;5!DOID:450;7.21e-07;5!DOID:66;7.21e-07;5!DOID:423;7.21e-07;5!DOID:0080000;7.21e-07;5!DOID:11722;7.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.41e-07,5;DOID:450,5.41e-07,5;DOID:66,5.41e-07,5;DOID:423,5.41e-07,5;DOID:0080000,5.41e-07,5;DOID:11722,5.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.24e-14!95;UBERON:0000914!1.14e-13!83;UBERON:0002329!1.14e-13!83;UBERON:0003077!1.14e-13!83;UBERON:0003059!1.14e-13!83;UBERON:0007282!1.14e-13!83;UBERON:0009618!1.14e-13!83;UBERON:0007285!1.14e-13!83;UBERON:0000486!1.05e-11!82;UBERON:0000475!1.60e-11!365;UBERON:0001134!6.70e-10!61;UBERON:0002036!6.70e-10!61;UBERON:0003082!6.70e-10!61;UBERON:0004290!1.10e-09!70;UBERON:0002385!1.40e-09!63;UBERON:0001015!1.40e-09!63;UBERON:0000383!1.40e-09!63;UBERON:0000481!1.05e-08!347;UBERON:0002199!6.04e-08!45;UBERON:0002416!6.04e-08!45;UBERON:0002097!1.67e-07!40;UBERON:0001444!3.05e-07!48;UBERON:0005256!3.46e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;2.62e-10;16!UBERON:0001828;5.39e-08;8!UBERON:0001434;9.35e-08;36!UBERON:0002097;1.14e-07;41!UBERON:0004905;4.85e-07;8!UBERON:0000982;4.85e-07;8!UBERON:0004770;4.85e-07;8!UBERON:0004765;5.45e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.18e-13,99;UBERON:0000075,2.32e-10,16;UBERON:0002097,1.65e-09,41;UBERON:0002199,1.32e-08,46;UBERON:0002416,1.32e-08,46;UBERON:0011137,2.39e-08,14;UBERON:0001828,7.49e-08,8;UBERON:0000486,4.32e-07,83;UBERON:0004905,6.08e-07,8;UBERON:0000982,6.08e-07,8;UBERON:0004770,6.08e-07,8;UBERON:0000165,8.44e-07,29;UBERON:0000930,8.44e-07,29 | |||
|phase1_expression=1.2717486548939,1.07050261945492,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.261185628199839,0,0,0,0,6.68338305984252,5.30235801164665,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0.246242116153576,0,0,4.57977579409691,2.32686522623903,0.753255837568817,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,2.50668955317945,3.62116297402059,3.9764297352555,1.94653948121054,0.756278537312543,2.4390233720882,0.790513071238134,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,2.02608818663328,15.4918741551466,2.86836620748814,0.709336764396714,2.24271040056923,1.06748995729705,2.22000793575444,0,0,0,1.05950199351452,0,0,0.624320153660641,0,0.597794722207204,0,0.161872944368132,0,2.04154171254893,1.35117749042945,1.54988671763648,3.56400857184616,4.94533858557114,0,0,0,0.375355559615893,2.77064115484183,5.26773145057006,2.45190236639216,5.70904623845068,1.58805056424029,8.9694817844431,4.48470516518992,2.96704661623387,13.2040082277137,5.35873152039882,15.2007918626921,8.74749224758472,22.2784758558471,5.55390929418832,9.84491719552046,3.77404584433427,2.7479829659198,21.3005755509969,8.2616720546665,0.508681776931463,3.09217365061275,4.09119180886252,2.29443676311203,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,3.12899064659632,4.5026865673502,0,5.10804720835177,5.77503585335668,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,2.91665277507493,1.75600456653801,1.1240175325762,0.201057944823262,0.833296006426766,0.325808305310325,0,1.44331342025273,0.927443239800615,14.0890433082986,0,0,0,0,0,0,0,0,4.68669169933885,12.4306774867156,1.27597587518148,0.358234090811393,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,3.87815147273333,0,0,0,0,0.771622122786426,0,1.0656887160644,0.142977993658148,1.62786481617433,0,0,0,0,0.301439377059586,0,0,0,0,0,3.35474797688216,2.29723871668228,1.42636905040718,3.4747513600219,2.67119219315498,3.04403637507822,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.4538298343828,9.00306937907419,2.44138521329762,2.9115920614313,6.95873056308931,4.73107245101804,1.99140405487612,3.61135319673263,0,0,5.97803038681893,1.65932251687533,1.82455590382974,0,0,0,0,0,0,0,0,1.98486246255021,10.8958001034524,3.08726103876381,0.128139149255701,1.53512174720011,0.804269605718038,0,0.771048469013278,0.532685175939381,2.7101961484557,1.03850885836724,0.813472649219715,0.966875596732978,2.20557117333613,0.920809889358963,1.03333003348146,0.910455840033585,1.18011973463482,0,0.231046011313244,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0.877039506583738,1.8300481571743,0,0,0,0.412164046590889,0,0,0.574265537996172,0,3.21367859688319,0.386682873168488,0.154048617114644,0,0.275673144969061,2.25582514223375,1.45016693914229,0.255679882248303,0.623224249527161,4.13212288402445,0.960950336825531,3.57315594984836,1.0115778085555,0.929691098594572,18.5739284630078,2.0911118104818,1.23213432070436,3.19383618190213,0.869932992075073,3.33583594387056,3.72124705529177,2.60510858551767,7.59310619324942,2.47819252100972,0.767693373934002,0.855877976067841,0.318203247925937,1.56989728039846,1.07923474549989,0.274537029736055,0.706874414074119,0.808729926293264,0,0,0,4.14312932373184,1.05650146756755,0.136499911407986,0.989838023675989,0,0.551365343546124,5.30751180192976,7.0152141640602,1.15755106853338,6.55894752046633,2.63783490051515,0,0.281695602532241,3.29846110069318,0.589494246078727,2.85336841185,0,4.22215270595328,2.30506425071931,0.379473173765715,0.349934720244983,2.59799704358883,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.886860307073351,1.83778720165568,1.01489521846434,0.764637207142375,1.13929437434833,1.19115887728894,0,0.648473311192717,1.08006287447623,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0850901730764,3.69262196843137,0,0,0,0.37428108081644,0.146508179271894,0,0.557216921387392,0.284136146806413,1.43246690842614,0,1.53580351049616,0,0,0.222617410045812,0,0,0,0,0,5.01116544260559,4.92339221844278,18.9734148473703,3.41499734359842,0,0,0,0,4.44547960578548,0,0.0927680981618513,0,0,0,0,1.70690172428249,0,0,0,0,0,0,0,0,6.41359707601103,2.06883333267483,0,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,3.32423363800313,16.0172919038198,16.0771278140546,22.6559142417388,15.7495598161074,2.38404868470568,0,0,1.55488378577335,0.649165919226273,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.69647365264322,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0.195551382734803,0,0.6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| ||
|short_description=p3@GALNT5 | |||
}} | }} |
Latest revision as of 17:08, 17 September 2015
Short description: | p3@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GALNT5_5end |
Coexpression cluster: | C1496_Fibroblast_Smooth_papillotubular_basal_liposarcoma_tenocyte_mesenchymal |
Association with transcript: | 138bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.02e-15 | 76 |
skin fibroblast | 6.07e-10 | 23 |
vascular associated smooth muscle cell | 5.43e-07 | 32 |
somatic stem cell | 5.52e-07 | 433 |
multi fate stem cell | 7.67e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.18e-13 | 99 |
subdivision of skeletal system | 2.32e-10 | 16 |
skin of body | 1.65e-09 | 41 |
integument | 1.32e-08 | 46 |
integumental system | 1.32e-08 | 46 |
axial skeletal system | 2.39e-08 | 14 |
gingiva | 7.49e-08 | 8 |
multilaminar epithelium | 4.32e-07 | 83 |
articulation | 6.08e-07 | 8 |
skeletal joint | 6.08e-07 | 8 |
articular system | 6.08e-07 | 8 |
mouth | 8.44e-07 | 29 |
stomodeum | 8.44e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.41e-07 | 5 |
myotonic disease | 5.41e-07 | 5 |
muscle tissue disease | 5.41e-07 | 5 |
myopathy | 5.41e-07 | 5 |
muscular disease | 5.41e-07 | 5 |
myotonic dystrophy | 5.41e-07 | 5 |