FFCP PHASE1:Hg19::chr2:113591043..113591050,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:113591043..113591050,- to FFCP PHASE1:Hg19::chr2:113591043..113591050,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3553 | |EntrezGene=3553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5992 | |HGNC=5992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=101bp_to_ENST00000487639_5end | |||
|cluster_id=chr2:113591043..113591050,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_IL1B_5end | |||
|id=chr2:113591043..113591050,- | |||
|ontology_enrichment_celltype=CL:0002057!1.76e-45!42;CL:0000860!8.19e-42!45;CL:0002009!1.59e-31!65;CL:0002194!1.34e-30!63;CL:0000576!1.34e-30!63;CL:0000040!1.34e-30!63;CL:0000559!1.34e-30!63;CL:0000766!2.04e-29!76;CL:0000557!4.65e-28!71;CL:0000839!1.27e-26!70;CL:0000763!3.61e-23!112;CL:0000049!3.61e-23!112;CL:0000738!2.14e-16!140;CL:0002087!3.83e-16!119;CL:0000037!9.50e-15!172;CL:0000566!9.50e-15!172;CL:0000034!2.69e-14!444;CL:0000723!3.94e-14!436;CL:0002031!4.58e-14!124;CL:0002032!5.94e-14!165;CL:0000837!5.94e-14!165;CL:0000988!2.63e-13!182;CL:0000048!2.78e-13!430;CL:0000359!3.22e-11!32;CL:0002371!3.15e-10!591;CL:0000144!3.25e-09!625;CL:0000192!5.61e-09!42;CL:0000514!5.61e-09!42;CL:0000134!1.31e-08!358;CL:0000012!2.12e-08!682;CL:0002320!3.56e-08!365;CL:0000548!7.25e-08!679;CL:0000004!7.25e-08!679;CL:0000255!7.25e-08!679;CL:0000003!8.92e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-49;33!CL:0002057;2.53e-49;33!CL:0000473;8.59e-33;39!CL:0000234;8.59e-33;39!CL:0000576;5.78e-27;48!CL:0000766;4.54e-18;69!CL:0000763;3.99e-12;100!CL:0002087;3.16e-11;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.99e-53,42;CL:0002057,9.99e-53,42;CL:0000473,1.02e-45,48;CL:0000234,1.02e-45,48;CL:0002194,6.77e-36,59;CL:0000576,6.77e-36,59;CL:0000040,6.77e-36,59;CL:0000559,6.77e-36,59;CL:0002009,1.26e-34,61;CL:0000766,2.09e-32,72;CL:0000839,8.67e-32,66;CL:0000557,2.86e-31,67;CL:0000763,6.68e-23,108;CL:0000049,6.68e-23,108;CL:0002087,6.71e-17,115;CL:0002031,4.67e-16,120;CL:0000738,1.43e-15,136;CL:0002032,3.66e-14,161;CL:0000837,3.66e-14,161;CL:0000037,2.04e-13,168;CL:0000988,1.52e-12,177;CL:0000034,2.47e-07,441;CL:0000048,6.97e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-37;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.71e-24!80;UBERON:0001474!1.60e-21!86;UBERON:0002204!2.55e-21!167;UBERON:0002390!2.79e-19!102;UBERON:0003061!2.79e-19!102;UBERON:0004765!3.86e-18!101;UBERON:0001434!3.86e-18!101;UBERON:0003081!7.06e-18!216;UBERON:0002193!1.08e-16!112;UBERON:0002405!8.78e-15!115;UBERON:0001637!6.71e-09!42;UBERON:0003509!6.71e-09!42;UBERON:0004572!6.71e-09!42;UBERON:0004573!1.22e-07!33;UBERON:0004571!1.22e-07!33;UBERON:0002384!1.38e-07!375;UBERON:0000926!7.40e-07!448;UBERON:0004120!7.40e-07!448;UBERON:0006603!7.40e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.25e-27,76;UBERON:0001474,5.35e-25,82;UBERON:0004765,1.70e-22,90;UBERON:0002405,1.14e-21,93;UBERON:0002390,2.13e-20,98;UBERON:0003061,2.13e-20,98;UBERON:0001434,6.32e-20,100;UBERON:0002204,1.34e-18,167;UBERON:0002193,3.30e-18,108;UBERON:0003081,4.19e-16,203;UBERON:0000926,7.73e-09,315;UBERON:0004120,7.73e-09,315;UBERON:0006603,7.73e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,2.60707781711184,3.25516306073778,0,0,0,0,0,0.485168122375632,0.697287110717054,0.822335776043652,0.619412741790207,5.46615545412086,3.58624989140741,2.83778675866302,8.27389633767885,3.87290810150296,5.41705946377367,0.752969358170419,1.09162460023138,0.224723484445085,15.9163624032869,7.70229664982625,14.7047538933779,0,0.199463657621632,0.426224750532694,18.2831820336008,19.2910976394988,17.4390229718761,0.251248665256743,0.521482918420201,0.868755378820466,6.65939452896706,10.6800514436394,16.456044146926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0.55597265731176,1.5743737541619,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0,0.606547444719948,0,0.842516912477962,0,0.487426979262569,3.16950440270266,0,0,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,2.60707781711184,3.25516306073778,0,0,0,0,0,0.485168122375632,0.697287110717054,0.822335776043652,0.619412741790207,5.46615545412086,3.58624989140741,2.83778675866302,8.27389633767885,3.87290810150296,5.41705946377367,0.752969358170419,1.09162460023138,0.224723484445085,15.9163624032869,7.70229664982625,14.7047538933779,0,0.199463657621632,0.426224750532694,18.2831820336008,19.2910976394988,17.4390229718761,0.251248665256743,0.521482918420201,0.868755378820466,6.65939452896706,10.6800514436394,16.456044146926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0.55597265731176,1.5743737541619,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0,0.606547444719948,0,0.842516912477962,0,0.487426979262569,3.16950440270266,0,0,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@IL1B | |||
}} | }} |
Latest revision as of 10:50, 16 September 2015
Short description: | p10@IL1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IL1B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 101bp_to_ENST00000487639_5end |
EntrezGene: | IL1B |
HGNC: | 5992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.99e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.99e-53 | 42 |
defensive cell | 1.02e-45 | 48 |
phagocyte | 1.02e-45 | 48 |
monopoietic cell | 6.77e-36 | 59 |
monocyte | 6.77e-36 | 59 |
monoblast | 6.77e-36 | 59 |
promonocyte | 6.77e-36 | 59 |
macrophage dendritic cell progenitor | 1.26e-34 | 61 |
myeloid leukocyte | 2.09e-32 | 72 |
myeloid lineage restricted progenitor cell | 8.67e-32 | 66 |
granulocyte monocyte progenitor cell | 2.86e-31 | 67 |
myeloid cell | 6.68e-23 | 108 |
common myeloid progenitor | 6.68e-23 | 108 |
nongranular leukocyte | 6.71e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 4.67e-16 | 120 |
leukocyte | 1.43e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.66e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.66e-14 | 161 |
hematopoietic stem cell | 2.04e-13 | 168 |
hematopoietic cell | 1.52e-12 | 177 |
stem cell | 2.47e-07 | 441 |
multi fate stem cell | 6.97e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.25e-27 | 76 |
bone element | 5.35e-25 | 82 |
skeletal element | 1.70e-22 | 90 |
immune system | 1.14e-21 | 93 |
hematopoietic system | 2.13e-20 | 98 |
blood island | 2.13e-20 | 98 |
skeletal system | 6.32e-20 | 100 |
musculoskeletal system | 1.34e-18 | 167 |
hemolymphoid system | 3.30e-18 | 108 |
lateral plate mesoderm | 4.19e-16 | 203 |
mesoderm | 7.73e-09 | 315 |
mesoderm-derived structure | 7.73e-09 | 315 |
presumptive mesoderm | 7.73e-09 | 315 |