FFCP PHASE1:Hg19::chr22:45405796..45405814,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:45405796..45405814,- to FFCP PHASE1:Hg19::chr22:45405796..45405814,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=112885 | |EntrezGene=112885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25161 | |HGNC=25161 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EK2 | |UniProt=Q96EK2 | ||
|association_with_transcript=0bp_to_NM_001135862,uc011aql.1_5end | |||
|cluster_id=chr22:45405796..45405814,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_3_at_PHF21B_5end | |||
|id=chr22:45405796..45405814,- | |||
|ontology_enrichment_celltype=CL:0002319!1.67e-12!25;CL:0000047!9.33e-11!8;CL:0000540!7.21e-09!6;CL:0000031!7.21e-09!6;CL:0000404!7.21e-09!6;CL:0000133!2.54e-08!59;CL:0002322!3.02e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.62e-23;6!CL:0000404;1.62e-23;6!CL:0002319;6.81e-19;25!CL:0002322;7.66e-13;5!CL:0002321;2.05e-12;15!CL:0000123;2.12e-09;2!CL:0000242;2.12e-09;2!CL:0000333;2.87e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.54e-24,6;CL:0000031,4.54e-24,6;CL:0000404,4.54e-24,6;CL:0000047,6.20e-24,8;CL:0002319,4.80e-19,25;CL:0000133,3.92e-15,59;CL:0002322,7.47e-13,5;CL:0000221,9.22e-12,72;CL:0000242,2.05e-09,2;CL:0000333,1.42e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;1.62e-23;6!CL:0000133;7.25e-08;59 | |||
|ontology_enrichment_disease=DOID:3095!1.69e-07!22;DOID:2994!1.69e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.05e-09;4!DOID:169;6.03e-07;6!DOID:171;9.10e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.40e-09,4;DOID:169,5.37e-07,6;DOID:171,9.62e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.61e-37!82;UBERON:0000073!5.74e-37!94;UBERON:0001016!5.74e-37!94;UBERON:0005743!3.77e-36!86;UBERON:0001049!1.90e-29!57;UBERON:0005068!1.90e-29!57;UBERON:0006241!1.90e-29!57;UBERON:0007135!1.90e-29!57;UBERON:0000955!2.53e-25!69;UBERON:0006238!2.53e-25!69;UBERON:0002780!5.89e-25!41;UBERON:0001890!5.89e-25!41;UBERON:0006240!5.89e-25!41;UBERON:0002346!2.32e-24!90;UBERON:0003080!4.36e-24!42;UBERON:0003075!1.11e-23!86;UBERON:0007284!1.11e-23!86;UBERON:0002616!3.56e-23!59;UBERON:0002020!1.84e-22!34;UBERON:0003528!1.84e-22!34;UBERON:0000924!2.91e-22!173;UBERON:0006601!2.91e-22!173;UBERON:0001893!3.01e-22!34;UBERON:0004121!1.75e-21!169;UBERON:0002791!2.17e-21!33;UBERON:0001869!8.89e-21!32;UBERON:0003056!7.19e-19!61;UBERON:0000956!3.70e-18!25;UBERON:0000203!3.70e-18!25;UBERON:0001950!4.09e-18!20;UBERON:0002619!7.01e-18!22;UBERON:0000033!1.16e-13!123;UBERON:0007023!1.55e-13!115;UBERON:0000153!2.10e-13!129;UBERON:0007811!2.10e-13!129;UBERON:0000922!9.39e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.99e-12;49!UBERON:0000013;2.87e-08;5!UBERON:0002410;2.87e-08;5!UBERON:0002021;1.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.83e-19,89;UBERON:0001017,1.13e-15,81;UBERON:0004121,4.73e-10,171;UBERON:0000924,4.73e-10,171;UBERON:0006601,4.73e-10,171;UBERON:0000013,2.49e-08,5;UBERON:0002410,2.49e-08,5;UBERON:0011216,9.73e-08,223;UBERON:0002021,1.66e-07,5 | |||
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| ||
|short_description=p3@PHF21B | |||
}} | }} |
Latest revision as of 03:27, 25 September 2015
Short description: | p3@PHF21B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHF21B_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_NM_001135862, uc011aql.1_5end |
EntrezGene: | PHF21B |
HGNC: | 25161 |
UniProt: | Q96EK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.54e-24 | 6 |
neuroblast | 4.54e-24 | 6 |
electrically signaling cell | 4.54e-24 | 6 |
neuronal stem cell | 6.20e-24 | 8 |
neural cell | 4.80e-19 | 25 |
neurectodermal cell | 3.92e-15 | 59 |
embryonic stem cell | 7.47e-13 | 5 |
ectodermal cell | 9.22e-12 | 72 |
Merkel cell | 2.05e-09 | 2 |
migratory neural crest cell | 1.42e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.83e-19 | 89 |
central nervous system | 1.13e-15 | 81 |
ectoderm-derived structure | 4.73e-10 | 171 |
ectoderm | 4.73e-10 | 171 |
presumptive ectoderm | 4.73e-10 | 171 |
sympathetic nervous system | 2.49e-08 | 5 |
autonomic nervous system | 2.49e-08 | 5 |
organ system subdivision | 9.73e-08 | 223 |
occipital lobe | 1.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.40e-09 | 4 |
neuroendocrine tumor | 5.37e-07 | 6 |
neuroectodermal tumor | 9.62e-07 | 10 |