FFCP PHASE1:Hg19::chr22:39548457..39548481,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:39548457..39548481,- to FFCP PHASE1:Hg19::chr22:39548457..39548481,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23492 | |EntrezGene=23492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1557 | |HGNC=1557 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYP2 | |UniProt=B0QYP2 | ||
|association_with_transcript=-8bp_to_ENST00000401405_5end | |||
|cluster_id=chr22:39548457..39548481,- | |||
|coexpression_cluster_id=C2646 | |||
|description=CAGE_peak_3_at_CBX7_5end | |||
|id=chr22:39548457..39548481,- | |||
|ontology_enrichment_celltype=CL:0000838!6.33e-10!52;CL:0000542!7.49e-10!53;CL:0000051!7.49e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.97e-07;18!CL:0000789;2.97e-07;18!CL:0002419;2.97e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.49e-07,18;CL:0000789,3.49e-07,18;CL:0002420,3.49e-07,18;CL:0002419,3.49e-07,18;CL:0000790,3.49e-07,18;CL:0000838,7.81e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.82e-12;82!CL:0000790;2.97e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.23e-52!115;UBERON:0001049!1.43e-20!57;UBERON:0005068!1.43e-20!57;UBERON:0006241!1.43e-20!57;UBERON:0007135!1.43e-20!57;UBERON:0003080!2.62e-16!42;UBERON:0002780!6.94e-16!41;UBERON:0001890!6.94e-16!41;UBERON:0006240!6.94e-16!41;UBERON:0002616!2.61e-15!59;UBERON:0000955!2.19e-14!69;UBERON:0006238!2.19e-14!69;UBERON:0002020!5.34e-14!34;UBERON:0003528!5.34e-14!34;UBERON:0001893!5.64e-14!34;UBERON:0001017!1.22e-13!82;UBERON:0002791!2.63e-13!33;UBERON:0005743!3.30e-13!86;UBERON:0003075!5.21e-13!86;UBERON:0007284!5.21e-13!86;UBERON:0001869!6.19e-13!32;UBERON:0002346!3.78e-12!90;UBERON:0000073!5.82e-12!94;UBERON:0001016!5.82e-12!94;UBERON:0002619!2.33e-11!22;UBERON:0001950!4.37e-10!20;UBERON:0000956!5.14e-10!25;UBERON:0000203!5.14e-10!25;UBERON:0003056!2.26e-08!61;UBERON:0000153!1.21e-07!129;UBERON:0007811!1.21e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.97e-21;53!UBERON:0002616;1.97e-21;53!UBERON:0007023;1.07e-20;114!UBERON:0002780;1.87e-20;41!UBERON:0001890;1.87e-20;41!UBERON:0001893;4.55e-20;34!UBERON:0003528;5.87e-20;34!UBERON:0002020;5.87e-20;34!UBERON:0001869;3.08e-19;32!UBERON:0002791;4.40e-19;32!UBERON:0002619;1.65e-18;22!UBERON:0001950;4.75e-16;20!UBERON:0000956;1.21e-15;25!UBERON:0000203;1.21e-15;25!UBERON:0000955;1.88e-14;68!UBERON:0001017;1.19e-13;75!UBERON:0001016;3.66e-11;83!UBERON:0000125;3.35e-10;9!UBERON:0002308;3.35e-10;9!UBERON:0002420;5.09e-10;9!UBERON:0007245;5.09e-10;9!UBERON:0010009;5.09e-10;9!UBERON:0010011;5.09e-10;9!UBERON:0000454;5.09e-10;9!UBERON:0000200;1.42e-09;6!UBERON:0004732;1.60e-09;13!UBERON:0004733;1.72e-08;12!UBERON:0002028;1.72e-08;12!UBERON:0002298;2.14e-08;6!UBERON:0009663;7.33e-08;7!UBERON:0000349;8.07e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.28e-89,114;UBERON:0001049,3.66e-39,56;UBERON:0005068,3.66e-39,56;UBERON:0006241,3.66e-39,56;UBERON:0007135,3.66e-39,56;UBERON:0000073,5.43e-36,53;UBERON:0002616,5.43e-36,53;UBERON:0000955,1.88e-30,68;UBERON:0006238,1.88e-30,68;UBERON:0003075,4.51e-30,82;UBERON:0007284,4.51e-30,82;UBERON:0001017,5.33e-29,81;UBERON:0002780,1.19e-28,41;UBERON:0001890,1.19e-28,41;UBERON:0003080,1.19e-28,41;UBERON:0006240,1.19e-28,41;UBERON:0002346,6.72e-28,86;UBERON:0001016,7.01e-26,89;UBERON:0003528,3.26e-24,34;UBERON:0002020,3.26e-24,34;UBERON:0001893,3.61e-24,34;UBERON:0001869,3.81e-22,32;UBERON:0002791,6.45e-22,32;UBERON:0010371,2.88e-20,104;UBERON:0003056,1.45e-19,61;UBERON:0002619,1.03e-18,22;UBERON:0010314,7.03e-17,132;UBERON:0001950,2.89e-16,20;UBERON:0000956,8.01e-16,25;UBERON:0000203,8.01e-16,25;UBERON:0011216,7.37e-15,223;UBERON:0004121,1.24e-11,171;UBERON:0000924,1.24e-11,171;UBERON:0006601,1.24e-11,171;UBERON:0003076,1.93e-11,15;UBERON:0003057,1.93e-11,15;UBERON:0000125,3.30e-10,9;UBERON:0002308,3.30e-10,9;UBERON:0002420,3.78e-10,9;UBERON:0007245,3.78e-10,9;UBERON:0010009,3.78e-10,9;UBERON:0010011,3.78e-10,9;UBERON:0000454,3.78e-10,9;UBERON:0004111,1.27e-09,240;UBERON:0000200,1.30e-09,6;UBERON:0004732,1.53e-09,13;UBERON:0000025,1.75e-09,192;UBERON:0004733,1.80e-08,12;UBERON:0002028,1.80e-08,12;UBERON:0007277,1.80e-08,12;UBERON:0002298,2.64e-08,6;UBERON:0000349,5.10e-08,5;UBERON:0009663,8.21e-08,7 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0,0.458480434487708,0.738905305049512,0.550975469195755,0.393364276848904,0,0.309632246632152,0,0,0,0.0774672005803016,0.568676929949686,0,0,0.401088894940283,0,0.895661896959697,0.32389366601898,0.515151135268373,0.145398238779565,0,0.485168122375632,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0.365328307529268,1.75996244461323,1.09227722252426,1.77901850772711,0.426730222566507,1.60158394814405,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,0,0.560508562981536,0,2.55722701147983,0.786021525498329,1.23360899399706,1.33749196312542,0,1.89379122293893,0,1.89397776704795,1.17842362989935,2.21533894583621,1.08321545506006,1.92136979588513,0.390178042679635,0.986627427622057,0.829050053357545,0,1.18629250529648,0.802622484269139,0,1.0197840842781,2.29932296161153,2.40539211837841,0.759059076058509,0.95569624297229,1.30216690771284,0.950452044448374,1.6563263098555,2.17577238962511,0,1.65744076430812,1.64225599384209,1.00803371612366,2.94184215361858,1.59306844271079,0,0,0.12786256184353,0,0,0.579386075843295,0,0,0,0,0,2.22664428346111,0,0,0,0,0.132957960518865,0,0.571994910780128,0.74291500265913,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0,0,0.717558542755448,0,0.211931901159562,0,0.618315175430633,0,0.558350568994769,0.168776332241266,0,0.504867548488229,0.184099797284599,0,0,0.302256294682921,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,3.9313088667105,0.590789906681404,2.20731549707325,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.985326475791887,0.616339038092582,2.07328115540772,1.8735593944205,5.30218220390796,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0.87192013766656,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0.560425719967636,0.985153801009636,2.80315847317372,1.28343036279748,0,0,0,0.335032530668698,0,1.49801404789436,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.473107245101804,1.05427273493442,0,0,0,0,0,0.434418072340414,0.195801157462741,0,0.206768026122887,1.07857100409308,1.06727557803444,0,0,0.30239029332968,0.744323423456331,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.657779629937804,0.784306353074702,0,0,0.325378394664303,1.75169719801128,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0,1.13008116620243,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0,0,0,0.844430541190656,1.31717957183961,0,0,0,0.670302275535787,0,2.07116361708914,0,0,0,0,1.52234282769651,0,0,1.42939065274673,1.23408681925858,0.648473311192717,0.540031437238115,1.58625035258854,0.213648142254946,1.92495971052672,1.22520107990516,0.185803175125719,0.28853842595289,0.924843963529383,0.159426272728822,0,0,0,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,2.19762268907841,0,0.557216921387392,0.284136146806413,0.23874448473769,0,0,1.9882952955326,5.20476840718897,0.222617410045812,0,0.211125408127993,3.98495976502139,3.03912307084262,0.251932747854276,0.306806047506464,0.369254416383208,0,0.0898683511473268,0,0,5.62267412130522,0,0,1.93866549219044,6.21546257684403,1.99613798001194,0,0.174919999992391,1.44999915086959,0,0.762760950878299,0.236387681767936,0.689486746482929,1.74962768029953,1.04174996959975,0,4.34147179051469,3.05163472634166,4.53374965718021,2.95547618953547,7.23971810608109,0,0,5.00176680274681,0.227884111694002,0,0.4487882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| ||
|short_description=p3@CBX7 | |||
}} | }} |
Latest revision as of 18:07, 24 September 2015
Short description: | p3@CBX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CBX7_5end |
Coexpression cluster: | C2646_occipital_temporal_cerebellum_postcentral_cerebral_insula_parietal |
Association with transcript: | -8bp_to_ENST00000401405_5end |
EntrezGene: | CBX7 |
HGNC: | 1557 |
UniProt: | B0QYP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.49e-07 | 18 |
alpha-beta T cell | 3.49e-07 | 18 |
immature T cell | 3.49e-07 | 18 |
mature T cell | 3.49e-07 | 18 |
immature alpha-beta T cell | 3.49e-07 | 18 |
lymphoid lineage restricted progenitor cell | 7.81e-07 | 52 |