FFCP PHASE1:Hg19::chr22:33255699..33255744,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:33255699..33255744,+ to FFCP PHASE1:Hg19::chr22:33255699..33255744,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=236bp_to_X80791_5end | |||
|cluster_id=chr22:33255699..33255744,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_4_at_TIMP3_5end | |||
|id=chr22:33255699..33255744,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.76e-12!180;CL:0000057!2.31e-09!75;CL:0002334!5.10e-08!12;CL:0000136!8.33e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.27e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.31e-10,76;CL:0002334,2.22e-09,12;CL:0000136,8.19e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.11e-13!365;UBERON:0004923!8.58e-13!57;UBERON:0007023!4.35e-12!115;UBERON:0000468!5.84e-10!659;UBERON:0000467!1.23e-09!625;UBERON:0003102!1.55e-09!95;UBERON:0000480!1.92e-09!626;UBERON:0005631!5.17e-08!14;UBERON:0000158!5.17e-08!14;UBERON:0002199!2.44e-07!45;UBERON:0002416!2.44e-07!45;UBERON:0000481!3.80e-07!347;UBERON:0000477!4.41e-07!286;UBERON:0000064!4.63e-07!219;UBERON:0000062!5.15e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.71e-07;10!UBERON:0000158;1.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.16e-13,66;UBERON:0005631,2.26e-09,14;UBERON:0000158,2.26e-09,14;UBERON:0003102,3.52e-08,99;UBERON:0002199,1.53e-07,46;UBERON:0002416,1.53e-07,46;UBERON:0007023,6.85e-07,114;UBERON:0004872,8.19e-07,83 | |||
|phase1_expression=5.81370813665781,7.49351833618441,10.1487170949099,13.009528785907,8.49226079411847,11.3404008133048,7.59899634504932,12.0026775951098,0.783556884599516,1.22866968250754,0,6.11635841964482,4.74780560811216,0.618831764800233,0,2.6893005858071,1.20538905604795,2.19093027116212,1.46379839637152,0.123121058076788,0.408001382488506,0.940364164434263,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0.309632246632152,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.17366355134002,6.14446559053763,0.50133791063589,2.462390822334,6.36228757640879,16.058950719987,0.378139268656271,0.665188192387692,0.351339142772504,4.25681995367566,0,0.370784442784429,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,1.55050055501597,1.42306505074684,2.34304428935269,2.81980521976403,1.52054421143703,4.14905497831888,0.367663080345869,0,0.625098097988558,0,0,0,0,0,0,0,0.436094052142534,15.4061305025549,6.07826455989983,3.44263870114369,25.8152958673932,3.90135220418193,1.12135520028461,1.06748995729705,3.7000132262574,0,0.269421344139376,0,0.908144565869588,0,3.74914290934075,3.74592092196385,0,0.896692083310806,0.117434498643765,0.323745888736263,0.140450806702248,0.816616685019573,1.71968044236475,3.40975077880026,4.75201142912821,7.41800787835671,0,0.718618141816238,0.336672227908132,0.250237039743928,0,1.31693286264251,1.22595118319608,3.15499923703853,0.340296549480063,13.0954434052869,2.98980344345994,7.84148034290379,25.2076520710898,8.24420233907511,7.9868567414145,11.9114788052217,16.5400805596441,8.96420447483027,9.08761587278812,3.95814564161887,19.2358807614386,10.6502877754984,5.23910910783729,2.20428770003634,0.57978255948989,1.63647672354501,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,14.0804579096834,8.36213219650751,9.66944449467364,1.39310378409594,1.44375896333917,0.709840800239063,0.674338760312407,0.723033089650446,0.882351781859152,0.653638332277218,0.474541238222193,0.808987848960987,0.588664395376038,0.38474715694639,7.38155454624648,8.41450642820675,1.2347220339942,1.47008711385542,0,0.982827216677626,2.36315962672562,0,2.33678033231916,0.514703430895577,2.74375713521564,0,0,0.370353780634118,8.14520763275812,0,0,0.115930404975077,0.469634776943287,1.01056513432752,2.77791307545966,3.99533719692656,0,0,0,1.40402559083543,0.297262324577456,0,1.34385702559088,1.70130116690864,1.43293636324557,0.581267877027924,0.766765358330422,1.97065295158377,3.43388892651582,7.04915592838625,9.94427678577034,6.56460653817176,0,7.25778008560728,2.34434894420094,5.13217338068116,5.14137463516618,12.6144084294445,0.285826432630578,7.73704481982989,0.87192013766656,4.9870034358246,12.5393564285044,3.57656445851882,3.381211010224,1.06375246633948,3.12022310734098,0.771622122786426,0,0,0.57191197463259,0,0,0.977208552881205,0.355391948742546,0,1.20575750823834,2.61460037580088,4.89867656792079,0,0.502257091432126,2.10833939483032,0.718874566474748,2.29723871668228,2.85273810081437,0.144781306667579,0.410952645100767,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.813795071099207,3.32753378449291,3.92543775353756,4.57337003598411,1.28855556491985,12.0378439891088,22.7407504055985,8.27784570340039,1.99267679560631,3.68738337083406,9.03589590468062,9.20265440074881,5.14715135716284,0,0,0,9.09382714338778,1.66435439510497,7.86214762657169,12.1572825831201,8.90079445070762,9.26178311629143,11.7888017315245,22.515118958935,9.97294311090366,7.42090332224955,17.4256953997001,25.3913267197772,7.47357119725663,4.67328986265259,13.9452454151951,2.90062679019893,2.00506470303285,1.65745780084613,1.49258782613989,0.728364672026868,1.18011973463482,0,0.308061348417659,0,0,0,2.27466768141793,1.19065593693561,0.431831832204279,4.62681758070868,0.270946437543853,0,0,0,0,0,0.261435451024901,2.56450125116389,6.23227826829441,22.7764876265012,15.7652747821015,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,5.12354806948246,1.07834031980251,0.614014698904518,0.275673144969061,0.214840489736547,0.435050081742686,0.767039646744908,1.60257664164127,2.80984356113663,1.34533047155574,0.127612712494584,1.11273558941105,7.90237433805386,47.221852024596,0.6970372701606,2.15623506123262,2.66153015158511,0.869932992075073,1.48259375283136,0.143124886741991,0.372158369359667,0.316379424718726,1.71567174531442,6.39744478278335,6.84702380854273,0.636406495851874,3.92474320099615,1.07923474549989,0.274537029736055,0,4.24583211303964,6.34041284692033,0.421258456238981,0,18.034798232715,48.5990675081075,1.22849920267187,3.81794666275024,3.39024349860728,6.61638412255349,5.97095077717098,11.8381739018516,4.6302042741335,7.21484227251296,1.82619339266434,0.92947049429925,0,0.430234056612155,1.3754865741837,0.7133421029625,0.709522128141196,10.9775970354785,8.89096210991735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|short_description=p4@TIMP3 | |||
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Latest revision as of 22:42, 19 September 2015
Short description: | p4@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 236bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.31e-10 | 76 |
preadipocyte | 2.22e-09 | 12 |
fat cell | 8.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.16e-13 | 66 |
extraembryonic membrane | 2.26e-09 | 14 |
membranous layer | 2.26e-09 | 14 |
surface structure | 3.52e-08 | 99 |
integument | 1.53e-07 | 46 |
integumental system | 1.53e-07 | 46 |
adult organism | 6.85e-07 | 114 |
splanchnic layer of lateral plate mesoderm | 8.19e-07 | 83 |