FFCP PHASE1:Hg19::chr22:31741757..31741770,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23598 | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |HGNC=13071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000215919_5end | |||
|cluster_id=chr22:31741757..31741770,- | |||
|description=CAGE_peak_12_at_PATZ1_5end | |||
|id=chr22:31741757..31741770,- | |||
|ontology_enrichment_celltype=CL:0002322!8.67e-10!5;CL:0000080!2.84e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.12e-09;4!CL:0000791;2.51e-08;18!CL:0000789;2.51e-08;18!CL:0002419;2.51e-08;18!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6!CL:0000624;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.12e-09,4;CL:0000791,2.51e-08,18;CL:0000789,2.51e-08,18;CL:0002420,2.51e-08,18;CL:0002419,2.51e-08,18;CL:0000790,2.51e-08,18;CL:0000624,7.58e-07,6;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.84e-34;1!CL:0000790;2.51e-08;18!CL:0000031;8.48e-07;6 | |||
|ontology_enrichment_disease=DOID:5093!7.76e-09!4;DOID:1612!7.76e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.98e-34;4!DOID:1612;5.98e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.06e-34,4;DOID:1612,5.06e-34,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.84e-14;10!UBERON:0001443;4.52e-13;11!UBERON:0001911;1.12e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.66e-14,10;UBERON:0001443,4.25e-13,11;UBERON:0001911,1.12e-09,4;UBERON:0005333,1.12e-09,4;UBERON:0008425,1.12e-09,4;UBERON:0005311,1.12e-09,4 | |||
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| 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| ||
|short_description=p12@PATZ1 | |||
}} | }} |
Latest revision as of 20:32, 19 September 2015
Short description: | p12@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PATZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000215919_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.12e-09 | 4 |
mature alpha-beta T cell | 2.51e-08 | 18 |
alpha-beta T cell | 2.51e-08 | 18 |
immature T cell | 2.51e-08 | 18 |
mature T cell | 2.51e-08 | 18 |
immature alpha-beta T cell | 2.51e-08 | 18 |
CD4-positive, alpha-beta T cell | 7.58e-07 | 6 |
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
breast | 2.66e-14 | 10 |
chest | 4.25e-13 | 11 |
mammary gland | 1.12e-09 | 4 |
mammary bud | 1.12e-09 | 4 |
mammary ridge | 1.12e-09 | 4 |
mammary placode | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.06e-34 | 4 |
breast cancer | 5.06e-34 | 4 |