FFCP PHASE1:Hg19::chr21:47540424..47540442,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:47540424..47540442,+ to FFCP PHASE1:Hg19::chr21:47540424..47540442,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000413758_5end | |||
|cluster_id=chr21:47540424..47540442,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_27_at_COL6A2_5end | |||
|id=chr21:47540424..47540442,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.93e-44!180;CL:0000057!9.52e-27!75;CL:0000048!2.25e-18!430;CL:0000680!8.40e-18!57;CL:0000056!8.40e-18!57;CL:0000355!8.40e-18!57;CL:0000723!2.55e-17!436;CL:0000187!8.00e-17!54;CL:0000034!2.08e-16!444;CL:0000183!3.51e-16!59;CL:0000393!6.04e-16!60;CL:0000211!6.04e-16!60;CL:0000192!4.03e-13!42;CL:0000514!4.03e-13!42;CL:0002371!5.13e-11!591;CL:0002620!9.80e-11!23;CL:0000359!1.72e-10!32;CL:0002334!1.18e-08!12;CL:0000144!1.41e-08!625;CL:0002320!2.11e-08!365;CL:0000499!3.16e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002552;4.31e-09;5!CL:0000723;8.63e-09;61!CL:0002334;3.11e-08;12!CL:0000134;1.36e-07;55!CL:0002570;2.89e-07;8!CL:0000048;5.75e-07;58!CL:0002320;8.48e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.66e-17,76;CL:0000048,8.28e-16,427;CL:0000723,3.13e-15,433;CL:0000034,1.73e-14,441;CL:0002320,2.29e-11,361;CL:0000187,6.19e-10,55;CL:0000680,4.16e-09,58;CL:0000056,4.16e-09,58;CL:0000355,4.16e-09,58;CL:0002552,5.20e-09,5;CL:0000134,8.71e-09,354;CL:0000393,2.28e-08,61;CL:0000211,2.28e-08,61;CL:0002334,4.39e-08,12;CL:0002570,1.82e-07,8;CL:0000192,2.51e-07,43;CL:0000514,2.51e-07,43;CL:0000219,6.84e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.00e-22!83;UBERON:0002329!1.00e-22!83;UBERON:0003077!1.00e-22!83;UBERON:0003059!1.00e-22!83;UBERON:0007282!1.00e-22!83;UBERON:0009618!1.00e-22!83;UBERON:0007285!1.00e-22!83;UBERON:0004290!4.34e-22!70;UBERON:0000486!2.52e-19!82;UBERON:0002385!2.86e-17!63;UBERON:0001015!2.86e-17!63;UBERON:0000383!2.86e-17!63;UBERON:0001134!9.67e-17!61;UBERON:0002036!9.67e-17!61;UBERON:0003082!9.67e-17!61;UBERON:0005256!1.37e-13!143;UBERON:0003102!3.86e-11!95;UBERON:0002199!1.10e-10!45;UBERON:0002416!1.10e-10!45;UBERON:0002097!1.01e-09!40;UBERON:0002384!2.17e-08!375;UBERON:0004872!2.76e-08!84;UBERON:0002100!4.18e-08!216;UBERON:0004573!4.42e-08!33;UBERON:0004571!4.42e-08!33;UBERON:0001637!1.81e-07!42;UBERON:0003509!1.81e-07!42;UBERON:0004572!1.81e-07!42;UBERON:0002067!2.44e-07!9;UBERON:0004016!2.44e-07!9;UBERON:0010083!2.44e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.21e-09;8!UBERON:0000982;2.21e-09;8!UBERON:0004770;2.21e-09;8!UBERON:0002384;1.80e-08;198!UBERON:0001013;1.81e-08;14!UBERON:0002067;2.86e-08;9!UBERON:0011135;5.26e-08;5!UBERON:0002216;5.26e-08;5!UBERON:0011134;5.26e-08;5!UBERON:0002209;5.26e-08;5!UBERON:0002213;5.26e-08;5!UBERON:0007844;5.26e-08;5!UBERON:0011138;5.26e-08;5!UBERON:0001130;5.26e-08;5!UBERON:0001066;5.26e-08;5!UBERON:0001468;5.26e-08;5!UBERON:0002199;6.09e-07;46!UBERON:0002416;6.09e-07;46!UBERON:0004573;8.98e-07;33!UBERON:0004571;8.98e-07;33!UBERON:0000075;9.12e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.13e-14,73;UBERON:0002329,4.30e-14,71;UBERON:0003059,4.30e-14,71;UBERON:0007282,4.30e-14,71;UBERON:0004290,4.30e-14,71;UBERON:0009618,4.30e-14,71;UBERON:0003077,8.95e-14,72;UBERON:0007285,8.95e-14,72;UBERON:0000486,7.34e-13,83;UBERON:0007503,4.78e-12,78;UBERON:0002384,4.89e-11,371;UBERON:0003102,2.57e-10,99;UBERON:0004905,2.31e-09,8;UBERON:0000982,2.31e-09,8;UBERON:0004770,2.31e-09,8;UBERON:0001134,3.93e-09,62;UBERON:0002036,3.93e-09,62;UBERON:0003082,3.93e-09,62;UBERON:0001013,1.01e-08,14;UBERON:0002385,1.19e-08,64;UBERON:0001015,1.19e-08,64;UBERON:0000383,1.19e-08,64;UBERON:0002067,1.72e-08,9;UBERON:0004016,1.72e-08,9;UBERON:0010083,1.72e-08,9;UBERON:0002199,2.56e-08,46;UBERON:0002416,2.56e-08,46;UBERON:0005256,5.52e-08,122;UBERON:0011135,6.55e-08,5;UBERON:0002216,6.55e-08,5;UBERON:0011134,6.55e-08,5;UBERON:0002209,6.55e-08,5;UBERON:0002213,6.55e-08,5;UBERON:0005856,6.55e-08,5;UBERON:0005866,6.55e-08,5;UBERON:0005863,6.55e-08,5;UBERON:0007844,6.55e-08,5;UBERON:0011138,6.55e-08,5;UBERON:0001130,6.55e-08,5;UBERON:0001066,6.55e-08,5;UBERON:0001468,6.55e-08,5;UBERON:0003104,1.36e-07,160;UBERON:0009142,1.36e-07,160;UBERON:0004573,2.65e-07,33;UBERON:0004571,2.65e-07,33;UBERON:0001637,9.55e-07,42;UBERON:0003509,9.55e-07,42;UBERON:0004572,9.55e-07,42 | |||
|phase1_expression=1.99846217197612,3.42560838225573,0.845726424575827,2.00146596706261,0.893922188854576,2.61701557230111,0,0,2.87304191019822,0,0,0,0.263766978228454,1.60896258848061,2.31978163009541,2.6893005858071,0.602694528023977,2.19093027116212,1.95173119516203,0.61560529038394,1.83600622119828,0.626909442956176,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,3.47631645505977,0.795285947051099,0.973269740605272,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,1.49091585508596,0.25326102332916,1.32409180813219,1.43418310374407,1.77334191099179,0.560677600142307,1.06748995729705,0.74000264525148,0,0.808264032418128,0.980771418680752,0.454072282934794,0.576175924479999,0.468642863667593,1.5608003841516,0.570471821544449,2.24173020827702,1.64408298101271,1.45685649931318,0.842704840213491,1.22492502752936,2.45668634623536,1.44656093646072,3.56400857184616,4.69807165629258,0.910161361938026,2.87447256726495,0.336672227908132,1.37630371859161,0,0,2.45190236639216,1.20190447125277,0,0.538168907066586,0.85422955527427,1.05965950579781,0.300091096084402,0.92747276314595,0.257640540045629,0.930584281657949,1.35021065793013,1.36411807225678,0.252433774244115,1.01254888506529,3.23292113637624,1.06502877754984,0.604512589365842,0.339121184620975,0,0,0,0,0,0.464775771478074,0,0,0,1.56449532329816,5.14592750554308,1.38134921352481,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.336393253036082,1.30788020649984,0.36669142910475,0.646358578788889,0,5.071816515336,0,1.04007436911366,0.514414748524284,1.41849132023278,0.799266537048298,0.428933980974443,2.17048642156577,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.821905290201534,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,1.34960640891054,1.00034104211935,1.62759014219841,1.03985430765404,0.892144943985809,0.157702415033935,0.35142424497814,0.601892199455438,4.5481500811197,2.0694614258501,1.32845119707087,0.368738337083406,1.91143951829782,0.587403472388222,3.77457766191941,0,0,0,0,0,0.907170879989041,0.496215615637554,0.460385919864187,3.08726103876381,0.768834895534206,1.02341449813341,1.28683136914886,1.48418066444991,2.46735510084249,2.84098760501003,0.574890092096664,2.59627214591811,2.5566283261191,0,0,0,0.34444334449382,4.55227920016793,3.8026080338233,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0.650060246036521,3.21367859688319,1.54673149267395,1.84858340537573,1.07452572308291,1.37836572484531,1.18162269355101,1.74020032697074,0.852266274161009,0.890320356467374,0,0.192190067365106,0,0,0,0.94443704049192,0,0.308033580176089,0,0.869932992075073,1.48259375283136,0.286249773483982,0.372158369359667,0,0.953150969619124,0.255897791311334,0.42793898803392,1.59101623962968,0.78494864019923,0.899362287916574,1.09814811894422,0.706874414074119,1.01091240786658,1.58510321173008,0.842516912477962,0,1.21856744815642,1.05650146756755,1.9109987597118,1.55545975149084,1.13008116620243,0.551365343546124,2.65375590096488,1.31535265576129,0,1.31178950409327,0.202910376962704,0.6196469961995,1.97186921772569,0.143411352204052,0.196498082026242,0,1.06428319221179,1.47775344708365,3.95153871551882,1.13841952129715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.445234820091624,0,0,1.39473591775749,0,0,0,0,3.73247505194169,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.227884111694002,0,0,0,0.957003479195758,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0.343972064943233,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,1.06726497369676,0.599428828746391,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,1.98627591109629,0,1.62899880526114,0.864221491201268,1.30634944043764,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35265819698172,0,0,1.94031243752936,4.90797950679171,1.66441758450784,5.11388114242741,2.0125432140206,1.77962244319307,1.14420034198462,3.478311246554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| ||
|short_description=p27@COL6A2 | |||
}} | }} |
Latest revision as of 22:59, 18 September 2015
Short description: | p27@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -31bp_to_ENST00000413758_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.66e-17 | 76 |
multi fate stem cell | 8.28e-16 | 427 |
somatic stem cell | 3.13e-15 | 433 |
stem cell | 1.73e-14 | 441 |
connective tissue cell | 2.29e-11 | 361 |
muscle cell | 6.19e-10 | 55 |
muscle precursor cell | 4.16e-09 | 58 |
myoblast | 4.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.16e-09 | 58 |
fibroblast of gingiva | 5.20e-09 | 5 |
mesenchymal cell | 8.71e-09 | 354 |
electrically responsive cell | 2.28e-08 | 61 |
electrically active cell | 2.28e-08 | 61 |
preadipocyte | 4.39e-08 | 12 |
mesenchymal stem cell of adipose | 1.82e-07 | 8 |
smooth muscle cell | 2.51e-07 | 43 |
smooth muscle myoblast | 2.51e-07 | 43 |
motile cell | 6.84e-07 | 386 |