FFCP PHASE1:Hg19::chr21:27011563..27011581,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:27011563..27011581,+ to FFCP PHASE1:Hg19::chr21:27011563..27011581,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58494 | |EntrezGene=58494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |HGNC=14686 | ||
|TSSclassifier=strong | |||
|UniProt=A8MXS1,E9PJP5,A8MTB0,P57087 | |UniProt=A8MXS1,E9PJP5,A8MTB0,P57087 | ||
|association_with_transcript=-2bp_to_ENST00000400532,ENST00000400533,ENST00000400535,ENST00000400537,ENST00000480456_5end | |||
|cluster_id=chr21:27011563..27011581,+ | |||
|description=CAGE_peak_4_at_JAM2_5end | |||
|id=chr21:27011563..27011581,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.31e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-49!115;UBERON:0000073!2.90e-35!94;UBERON:0001016!2.90e-35!94;UBERON:0001017!1.80e-34!82;UBERON:0001049!3.98e-34!57;UBERON:0005068!3.98e-34!57;UBERON:0006241!3.98e-34!57;UBERON:0007135!3.98e-34!57;UBERON:0005743!8.90e-34!86;UBERON:0000955!1.41e-30!69;UBERON:0006238!1.41e-30!69;UBERON:0002616!1.56e-30!59;UBERON:0003075!3.67e-30!86;UBERON:0007284!3.67e-30!86;UBERON:0002346!3.29e-27!90;UBERON:0003080!1.46e-26!42;UBERON:0002780!5.43e-26!41;UBERON:0001890!5.43e-26!41;UBERON:0006240!5.43e-26!41;UBERON:0004121!3.04e-24!169;UBERON:0000153!9.35e-23!129;UBERON:0007811!9.35e-23!129;UBERON:0000924!1.37e-22!173;UBERON:0006601!1.37e-22!173;UBERON:0000033!2.68e-22!123;UBERON:0003056!3.39e-22!61;UBERON:0001893!4.83e-22!34;UBERON:0002020!9.84e-22!34;UBERON:0003528!9.84e-22!34;UBERON:0002791!2.66e-21!33;UBERON:0001869!8.05e-21!32;UBERON:0000956!4.33e-16!25;UBERON:0000203!4.33e-16!25;UBERON:0002619!1.23e-15!22;UBERON:0001950!1.45e-14!20;UBERON:0000475!3.82e-13!365;UBERON:0000468!4.30e-09!659;UBERON:0003076!1.17e-08!15;UBERON:0003057!1.17e-08!15;UBERON:0000481!6.14e-08!347;UBERON:0002420!1.85e-07!9;UBERON:0007245!1.85e-07!9;UBERON:0010009!1.85e-07!9;UBERON:0010011!1.85e-07!9;UBERON:0000454!1.85e-07!9;UBERON:0004732!2.55e-07!13;UBERON:0002308!4.17e-07!9;UBERON:0000125!4.17e-07!9;UBERON:0000025!6.68e-07!194;UBERON:0000062!7.57e-07!511;UBERON:0004111!8.46e-07!241;UBERON:0000477!8.80e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.99e-26;34!UBERON:0001869;5.62e-26;32!UBERON:0002780;7.02e-26;41!UBERON:0001890;7.02e-26;41!UBERON:0002791;7.87e-26;32!UBERON:0003528;1.61e-25;34!UBERON:0002020;1.61e-25;34!UBERON:0000073;5.64e-24;53!UBERON:0002616;5.64e-24;53!UBERON:0002619;6.68e-22;22!UBERON:0000956;1.76e-21;25!UBERON:0000203;1.76e-21;25!UBERON:0001950;3.08e-20;20!UBERON:0007023;5.69e-19;114!UBERON:0001017;7.11e-17;75!UBERON:0000955;3.91e-16;68!UBERON:0001016;3.74e-14;83!UBERON:0002420;1.33e-10;9!UBERON:0007245;1.33e-10;9!UBERON:0010009;1.33e-10;9!UBERON:0010011;1.33e-10;9!UBERON:0000454;1.33e-10;9!UBERON:0000125;5.10e-10;9!UBERON:0002308;5.10e-10;9!UBERON:0004732;1.80e-08;13!UBERON:0009663;1.84e-08;7!UBERON:0001871;3.38e-08;6!UBERON:0000200;4.30e-08;6!UBERON:0004733;1.63e-07;12!UBERON:0002028;1.63e-07;12!UBERON:0011216;2.53e-07;132!UBERON:0001894;3.04e-07;7!UBERON:0002298;3.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-71,114;UBERON:0001049,2.42e-45,56;UBERON:0005068,2.42e-45,56;UBERON:0006241,2.42e-45,56;UBERON:0007135,2.42e-45,56;UBERON:0000073,4.44e-42,53;UBERON:0002616,4.44e-42,53;UBERON:0001017,1.08e-39,81;UBERON:0001016,1.54e-37,89;UBERON:0000955,1.05e-36,68;UBERON:0006238,1.05e-36,68;UBERON:0002780,4.19e-36,41;UBERON:0001890,4.19e-36,41;UBERON:0003080,4.19e-36,41;UBERON:0006240,4.19e-36,41;UBERON:0003075,7.21e-35,82;UBERON:0007284,7.21e-35,82;UBERON:0002346,3.15e-32,86;UBERON:0001893,4.30e-30,34;UBERON:0003528,1.21e-29,34;UBERON:0002020,1.21e-29,34;UBERON:0001869,3.06e-28,32;UBERON:0002791,5.38e-28,32;UBERON:0010314,2.76e-26,132;UBERON:0010371,2.84e-25,104;UBERON:0003056,6.56e-25,61;UBERON:0002619,1.02e-21,22;UBERON:0000956,4.08e-21,25;UBERON:0000203,4.08e-21,25;UBERON:0004121,3.11e-20,171;UBERON:0000924,3.11e-20,171;UBERON:0006601,3.11e-20,171;UBERON:0001950,4.40e-20,20;UBERON:0011216,8.13e-20,223;UBERON:0004111,1.31e-12,240;UBERON:0000025,8.62e-12,192;UBERON:0002420,1.60e-10,9;UBERON:0007245,1.60e-10,9;UBERON:0010009,1.60e-10,9;UBERON:0010011,1.60e-10,9;UBERON:0000454,1.60e-10,9;UBERON:0003076,2.67e-10,15;UBERON:0003057,2.67e-10,15;UBERON:0000125,5.45e-10,9;UBERON:0002308,5.45e-10,9;UBERON:0009663,2.03e-08,7;UBERON:0004732,2.35e-08,13;UBERON:0000200,4.01e-08,6;UBERON:0001871,4.47e-08,6;UBERON:0004733,2.05e-07,12;UBERON:0002028,2.05e-07,12;UBERON:0007277,2.05e-07,12;UBERON:0001894,2.36e-07,7;UBERON:0006222,2.36e-07,7;UBERON:0002298,3.39e-07,6 | |||
|phase1_expression=2.18014055124668,0.214100523890983,2.39622486963151,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.866364470720326,0.331397375727916,0,0,1.46062018077475,1.46379839637152,0.61560529038394,0.408001382488506,3.44800193625897,1.14494394852423,1.09499540058307,0.753255837568817,0.229240217243854,0.328402357799783,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.929119112685311,0,0.256160706529101,0.236482229888585,0.344745680736619,0,2.70852973188684,0.188242339542605,0,0,0,0.641858054152187,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0,1.32208974556972,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.00267582127178,0.434539556882471,0,1.94653948121054,0.472674085820339,0.443458794925128,0.614843499851882,7.7932549921139,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,1.77883131343355,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,1.53316637465883,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0.70296429550139,0,0,0,0.469737994575059,0.161872944368132,0.140450806702248,0,0.368502951935304,0.309977343527296,2.37600571456411,2.47266929278557,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0.612975591598039,1.05166641234618,0,0.179389635688862,2.13557388818567,2.11931901159562,0.300091096084402,0.92747276314595,0,0.37223371266318,0.337552664482532,0.194874010322397,0,1.65689817556139,1.2931684545505,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.731842236777572,0.662648841607426,1.39432731443422,0.932949495138334,0.756962552626885,0,6.25798129319264,4.5026865673502,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0.651616610620649,0,0,1.73895607462615,0.821860859650752,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0,0.387815147273333,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.710783897485092,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.61642896765115,1.07436577943937,0,0,0,0,3.30323011489202,1.30139853857622,0,1.67516265334349,0.637938751653163,0,0,0,0.613457458595699,0,0.271265023699736,0.415941723061614,0.535286966391485,2.20783381047509,1.7571212248907,0.601892199455438,0,1.03473071292505,0.664225598535437,0.184369168541703,0.60818530127658,0.195801157462741,1.02943027143257,0,0,0,0,0,0,1.24053903909388,2.30192959932094,0.561320188866147,3.33161788064823,1.53512174720011,1.44768529029247,2.96836132889982,0.154209693802656,0.177561725313127,0.410635780069046,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,4.43076350085206,0.457847324091717,0.41254749960294,0.574265537996172,0,1.6068392984416,0.773365746336976,0.154048617114644,0.307007349452259,0,0.429680979473094,0.435050081742686,0.511359764496605,0.712256285173899,0,0,0,0,0,1.25924938732256,0,0,0,0,1.8532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0,0,0,1.58510321173008,0,0,0,0,0,1.27264888758341,0,1.65409603063837,0,0.876901770507525,0.578775534266688,0,1.01455188481352,0,0,0.143411352204052,0.196498082026242,0.7133421029625,0.709522128141196,0.211107635297664,0,0.379473173765715,0.699869440489966,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,5.12778627451629,0,3.45474491260183,0,0.95497793895076,0.593929361665277,0,8.94732882989668,7.03347082052564,2.33748280548102,0,0,3.98495976502139,3.59169090190492,0,0.20453736500431,0.492339221844278,4.97663340258892,0,0,0,7.49689882840695,0,0,2.90799823828566,10.1117226996418,5.98841394003583,0.260427761085233,0,5.07499702804355,0,0,0,0.689486746482929,0.583209226766509,1.04174996959975,9.74315524395223,14.1097833191727,1.52581736317083,5.08664595683633,1.18219047581419,16.4539047865479,0,0.139423744278603,13.1584942041493,0.113942055847001,0,0,0,5.74202087517455,2.56473261525214,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,4.95362361218699,6.11030144933625,0,0.247127877893006,0.522109747527277,6.26830536720296,9.63093176758547,6.09087558885882,0,0,0.485560759068186,5.52418163989147,1.20990716048664,5.20323694771833,7.58238955541856,0,0,0,0,0.313932918407225,0,0,0,0,0,0,4.01871336956669,0,0,0,0,7.75912131907355,7.67828302216052,8.58726814966023,0,0,10.6362137205876,0,0.0801588202515337,7.04394882639863,0,0,0.114536596165916,0,0,0.124252535565433,0,1.35904206073614,1.98745407993433,0,1.15580235960608,6.00420288709789,3.83335060897581,1.27746588066972,0.429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| ||
|short_description=p4@JAM2 | |||
}} | }} |
Latest revision as of 22:13, 17 September 2015
Short description: | p4@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000400532, ENST00000400533, ENST00000400535, ENST00000400537, ENST00000480456_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | A8MXS1E9PJP5A8MTB0P57087 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data