FFCP PHASE1:Hg19::chr20:60174827..60174849,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:60174827..60174849,+ to FFCP PHASE1:Hg19::chr20:60174827..60174849,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1002 | |EntrezGene=1002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1763 | |HGNC=1763 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1P8 | |UniProt=G3V1P8 | ||
|association_with_transcript=0bp_to_ENST00000543233,uc002ybp.1_5end | |||
|cluster_id=chr20:60174827..60174849,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CDH4_5end | |||
|id=chr20:60174827..60174849,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.60e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.67e-94!22;UBERON:0001893!1.53e-93!34;UBERON:0002020!4.32e-93!34;UBERON:0003528!4.32e-93!34;UBERON:0001869!4.67e-92!32;UBERON:0002791!8.00e-89!33;UBERON:0001950!4.97e-85!20;UBERON:0002780!3.64e-83!41;UBERON:0001890!3.64e-83!41;UBERON:0006240!3.64e-83!41;UBERON:0001049!4.18e-83!57;UBERON:0005068!4.18e-83!57;UBERON:0006241!4.18e-83!57;UBERON:0007135!4.18e-83!57;UBERON:0000956!4.78e-83!25;UBERON:0000203!4.78e-83!25;UBERON:0003080!4.28e-81!42;UBERON:0002616!4.57e-75!59;UBERON:0000955!1.53e-71!69;UBERON:0006238!1.53e-71!69;UBERON:0001017!2.15e-71!82;UBERON:0005743!7.75e-68!86;UBERON:0000073!6.61e-61!94;UBERON:0001016!6.61e-61!94;UBERON:0003075!1.52e-60!86;UBERON:0007284!1.52e-60!86;UBERON:0002346!1.38e-57!90;UBERON:0003056!1.97e-54!61;UBERON:0007023!1.83e-50!115;UBERON:0000153!7.88e-41!129;UBERON:0007811!7.88e-41!129;UBERON:0000033!1.73e-40!123;UBERON:0001871!2.44e-31!7;UBERON:0004121!2.58e-31!169;UBERON:0000200!2.83e-31!6;UBERON:0000924!1.92e-30!173;UBERON:0006601!1.92e-30!173;UBERON:0000349!1.32e-25!5;UBERON:0002021!3.63e-25!5;UBERON:0000025!4.67e-20!194;UBERON:0001872!4.48e-17!5;UBERON:0002771!1.15e-16!3;UBERON:0000988!4.04e-15!3;UBERON:0004111!7.43e-15!241;UBERON:0002420!6.02e-14!9;UBERON:0007245!6.02e-14!9;UBERON:0010009!6.02e-14!9;UBERON:0010011!6.02e-14!9;UBERON:0000454!6.02e-14!9;UBERON:0002308!1.99e-13!9;UBERON:0000125!1.99e-13!9;UBERON:0000064!2.87e-13!219;UBERON:0000477!1.50e-12!286;UBERON:0000483!5.08e-12!309;UBERON:0000119!7.74e-12!312;UBERON:0000369!8.50e-12!4;UBERON:0002435!8.50e-12!4;UBERON:0000204!8.50e-12!4;UBERON:0010082!8.50e-12!4;UBERON:0001870!1.61e-11!2;UBERON:0001876!1.79e-11!2;UBERON:0001954!5.00e-11!2;UBERON:0003022!5.00e-11!2;UBERON:0002421!5.00e-11!2;UBERON:0002600!5.00e-11!2;UBERON:0000475!6.50e-11!365;UBERON:0001873!1.12e-10!2;UBERON:0010122!1.12e-10!2;UBERON:0002360!1.18e-10!2;UBERON:0000094!1.18e-10!2;UBERON:0007645!1.18e-10!2;UBERON:0002148!1.66e-10!2;UBERON:0009662!1.66e-10!2;UBERON:0002298!7.51e-10!8;UBERON:0003076!7.59e-08!15;UBERON:0003057!7.59e-08!15;UBERON:0000481!1.66e-07!347;UBERON:0005383!2.13e-07!3;UBERON:0005382!2.13e-07!3;UBERON:0006331!2.76e-07!3;UBERON:0000062!5.43e-07!511;UBERON:0009663!6.21e-07!7;UBERON:0002022!7.90e-07!1;UBERON:0003112!8.81e-07!1;UBERON:0000032!8.81e-07!1;UBERON:0005253!8.81e-07!1;UBERON:0003128!8.81e-07!1;UBERON:0002241!8.81e-07!1;UBERON:0001703!8.81e-07!1;UBERON:0004761!8.81e-07!1;UBERON:0009617!8.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.74e-109;22!UBERON:0001950;4.43e-107;20!UBERON:0000956;1.61e-96;25!UBERON:0000203;1.61e-96;25!UBERON:0001869;2.47e-83;32!UBERON:0001893;6.31e-78;34!UBERON:0002791;3.81e-74;32!UBERON:0003528;5.96e-69;34!UBERON:0002020;5.96e-69;34!UBERON:0002780;2.92e-50;41!UBERON:0001890;2.92e-50;41!UBERON:0000200;9.44e-48;6!UBERON:0000073;1.87e-34;53!UBERON:0002616;1.87e-34;53!UBERON:0001871;5.60e-29;6!UBERON:0001872;3.48e-26;5!UBERON:0000349;9.15e-26;5!UBERON:0002021;2.39e-25;5!UBERON:0001870;1.54e-24;3!UBERON:0000955;8.57e-24;68!UBERON:0001017;1.31e-23;75!UBERON:0002771;1.91e-17;2!UBERON:0001876;5.97e-17;2!UBERON:0002702;1.05e-16;2!UBERON:0001016;9.43e-16;83!UBERON:0007023;2.22e-11;114!UBERON:0002022;9.04e-10;1!UBERON:0003112;1.03e-09;1!UBERON:0011158;1.03e-09;1!UBERON:0003128;1.03e-09;1!UBERON:0001703;1.03e-09;1!UBERON:0002241;1.03e-09;1!UBERON:0002581;1.32e-09;1!UBERON:0002902;2.35e-09;1!UBERON:0001882;2.35e-09;1!UBERON:0009899;2.35e-09;1!UBERON:0007190;2.35e-09;1!UBERON:0005403;2.35e-09;1!UBERON:0011216;3.92e-09;132!UBERON:0002420;1.49e-08;9!UBERON:0007245;1.49e-08;9!UBERON:0010009;1.49e-08;9!UBERON:0010011;1.49e-08;9!UBERON:0000454;1.49e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.86e-109,22;UBERON:0001950,3.65e-107,20;UBERON:0000956,1.71e-96,25;UBERON:0000203,1.71e-96,25;UBERON:0001869,1.42e-93,32;UBERON:0001893,4.78e-88,34;UBERON:0002791,3.22e-84,32;UBERON:0003528,3.13e-79,34;UBERON:0002020,3.13e-79,34;UBERON:0002780,7.61e-73,41;UBERON:0001890,7.61e-73,41;UBERON:0003080,7.61e-73,41;UBERON:0006240,7.61e-73,41;UBERON:0000073,9.49e-62,53;UBERON:0002616,9.49e-62,53;UBERON:0001049,2.52e-58,56;UBERON:0005068,2.52e-58,56;UBERON:0006241,2.52e-58,56;UBERON:0007135,2.52e-58,56;UBERON:0000955,9.17e-57,68;UBERON:0006238,9.17e-57,68;UBERON:0001017,1.06e-51,81;UBERON:0003056,2.64e-48,61;UBERON:0000200,4.94e-48,6;UBERON:0001016,2.67e-46,89;UBERON:0003075,5.33e-39,82;UBERON:0007284,5.33e-39,82;UBERON:0002346,4.75e-37,86;UBERON:0007023,9.25e-37,114;UBERON:0010371,4.15e-30,104;UBERON:0001871,4.08e-29,6;UBERON:0001872,5.47e-26,5;UBERON:0000349,9.76e-26,5;UBERON:0010314,1.33e-25,132;UBERON:0002021,2.24e-25,5;UBERON:0001870,1.21e-24,3;UBERON:0004121,9.03e-23,171;UBERON:0000924,9.03e-23,171;UBERON:0006601,9.03e-23,171;UBERON:0011216,2.47e-18,223;UBERON:0002771,1.37e-17,2;UBERON:0001876,5.08e-17,2;UBERON:0002702,9.68e-17,2;UBERON:0000025,9.26e-15,192;UBERON:0004111,4.32e-11,240;UBERON:0002022,8.68e-10,1;UBERON:0003112,1.03e-09,1;UBERON:0011158,1.03e-09,1;UBERON:0003128,1.03e-09,1;UBERON:0001703,1.03e-09,1;UBERON:0002241,1.03e-09,1;UBERON:0004761,1.03e-09,1;UBERON:0009617,1.03e-09,1;UBERON:0002581,1.32e-09,1;UBERON:0007190,1.84e-09,1;UBERON:0001882,2.16e-09,1;UBERON:0005403,2.16e-09,1;UBERON:0002902,2.35e-09,1;UBERON:0009899,2.35e-09,1;UBERON:0002420,1.38e-08,9;UBERON:0007245,1.38e-08,9;UBERON:0010009,1.38e-08,9;UBERON:0010011,1.38e-08,9;UBERON:0000454,1.38e-08,9;UBERON:0000483,6.63e-08,306;UBERON:0000119,8.60e-08,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,3.23539657744179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.66982576691332,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98858014522036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0,0,0,0,5.46746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,6.34536577490208,2.3786276834235,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82608590424422,2.8339315265117,1.59633859057151,1.43581454968528,0.252071696221718,2.48966108871184,4.52131807769183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83657855397258,2.34323429584154,2.06686796501184,3.04395888930753,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,3.485956998831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,5.43931921527318,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,3.23539657744179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.66982576691332,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98858014522036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0,0,0,0,5.46746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,6.34536577490208,2.3786276834235,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82608590424422,2.8339315265117,1.59633859057151,1.43581454968528,0.252071696221718,2.48966108871184,4.52131807769183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83657855397258,2.34323429584154,2.06686796501184,3.04395888930753,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,3.485956998831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,5.43931921527318,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CDH4 | |||
}} | }} |
Latest revision as of 09:24, 17 September 2015
Short description: | p2@CDH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000543233, uc002ybp.1_5end |
EntrezGene: | CDH4 |
HGNC: | 1763 |
UniProt: | G3V1P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data