FFCP PHASE1:Hg19::chr20:52225019..52225047,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:52225019..52225047,- to FFCP PHASE1:Hg19::chr20:52225019..52225047,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:52225019..52225047,- | |||
|coexpression_cluster_id=C925 | |||
|description=CAGE_peak_at_chr20:52225019..52225047,- | |||
|id=chr20:52225019..52225047,- | |||
|ontology_enrichment_celltype=CL:0000039!8.24e-21!7;CL:0000586!8.24e-21!7;CL:0002322!3.85e-13!5;CL:0002541!2.46e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.79e-47;7!CL:0000586;6.79e-47;7!CL:0002541;8.43e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.79e-47,7;CL:0000586,6.79e-47,7;CL:0002541,8.43e-20,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.86e-11;10!UBERON:0005564;3.86e-11;10!UBERON:0003124;6.52e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!2.12e-09!22;DOID:2994!2.12e-09!22;DOID:1036!8.43e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.62e-23;22!DOID:2994;2.62e-23;22!DOID:1036;8.90e-20;8!DOID:8692;3.78e-12;31!DOID:1240;1.94e-08;39!DOID:1799;3.80e-08;1!DOID:10165;3.80e-08;1!DOID:1798;3.80e-08;1!DOID:8552;6.52e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.59e-23,22;DOID:2994,2.59e-23,22;DOID:1036,9.64e-20,8;DOID:8692,5.18e-12,31;DOID:162,3.76e-10,235;DOID:14566,7.60e-10,239;DOID:1240,2.56e-09,39;DOID:1799,3.80e-08,1;DOID:10165,3.80e-08,1;DOID:1798,3.80e-08,1;DOID:8552,6.97e-08,1;DOID:2531,7.26e-07,51;DOID:0060083,7.26e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.98e-14!14;UBERON:0000158!3.98e-14!14;UBERON:0000473!1.23e-12!8;UBERON:0000476!2.46e-09!3;UBERON:0000920!2.46e-09!3;UBERON:0000305!4.95e-09!7;UBERON:0003135!5.89e-09!11;UBERON:0004871!7.39e-08!8;UBERON:0000478!1.71e-07!24;UBERON:0003124!8.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.43e-20;3!UBERON:0000920;8.43e-20;3!UBERON:0000473;6.78e-14;8!UBERON:0003135;3.90e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.43e-20,3;UBERON:0003124,5.66e-15,7;UBERON:0000473,6.78e-14,8;UBERON:0003135,3.90e-10,11;UBERON:0005631,1.49e-07,14;UBERON:0000158,1.49e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.927708378250397,0.580969714347592,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0.811367035427949,0,2.81974010175699,0,0,4.24761826123297,0,0,0.47748896947538,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83917274919404,19.8364394145596,22.3813586159337,4.78501739597879,1.19076871422421,3.73124343213044,0,0,4.32150372940407,1.80476528493745,3.13700054908383,2.01385904371011,2.08729105996604,4.92703394839174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99333633537456,0,9.506537481771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,15.4524949744039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96733272910777,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594817247738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,1.31118686356435,8.48879956776628,11.8307042500699,18.9724357738548,18.1951901078993,24.5693388506528,0.378893491091197,0.535928260312357,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.927708378250397,0.580969714347592,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0.811367035427949,0,2.81974010175699,0,0,4.24761826123297,0,0,0.47748896947538,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83917274919404,19.8364394145596,22.3813586159337,4.78501739597879,1.19076871422421,3.73124343213044,0,0,4.32150372940407,1.80476528493745,3.13700054908383,2.01385904371011,2.08729105996604,4.92703394839174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99333633537456,0,9.506537481771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,15.4524949744039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96733272910777,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594817247738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,1.31118686356435,8.48879956776628,11.8307042500699,18.9724357738548,18.1951901078993,24.5693388506528,0.378893491091197,0.535928260312357,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:52225019..52225047,- | |||
}} | }} |
Latest revision as of 15:29, 28 July 2015
Short description: | p@chr20:52225019..52225047, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52225019..52225047, - |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.79e-47 | 7 |
germ cell | 6.79e-47 | 7 |
chorionic membrane mesenchymal stem cell | 8.43e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.43e-20 | 3 |
chorion | 5.66e-15 | 7 |
testis | 6.78e-14 | 8 |
male reproductive organ | 3.90e-10 | 11 |
extraembryonic membrane | 1.49e-07 | 14 |
membranous layer | 1.49e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.59e-23 | 22 |
germ cell cancer | 2.59e-23 | 22 |
chronic leukemia | 9.64e-20 | 8 |
myeloid leukemia | 5.18e-12 | 31 |
cancer | 3.76e-10 | 235 |
disease of cellular proliferation | 7.60e-10 | 239 |
leukemia | 2.56e-09 | 39 |
islet cell tumor | 3.80e-08 | 1 |
endocrine pancreas cancer | 3.80e-08 | 1 |
pancreatic endocrine carcinoma | 3.80e-08 | 1 |
chronic myeloid leukemia | 6.97e-08 | 1 |
hematologic cancer | 7.26e-07 | 51 |
immune system cancer | 7.26e-07 | 51 |