FFCP PHASE1:Hg19::chr20:52193219..52193228,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:52193219..52193228,- to FFCP PHASE1:Hg19::chr20:52193219..52193228,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:52193219..52193228,- | |||
|description=CAGE_peak_at_chr20:52193219..52193228,- | |||
|id=chr20:52193219..52193228,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.44e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.44e-09;1!UBERON:0003852;2.44e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.44e-09;1!DOID:6193;2.44e-09;1!DOID:5093;3.60e-09;4!DOID:1612;3.60e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-09,1;DOID:5093,2.45e-09,4;DOID:1612,2.45e-09,4;DOID:6193,2.55e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.44e-09;1!UBERON:0004911;2.44e-09;1!UBERON:0005705;2.44e-09;1!UBERON:0008193;2.44e-09;1!UBERON:0010912;2.44e-09;1!UBERON:0002514;2.44e-09;1!UBERON:0003457;2.44e-09;1!UBERON:0008907;2.44e-09;1!UBERON:0008001;2.44e-09;1!UBERON:0007213;2.44e-09;1!UBERON:0009891;2.44e-09;1!UBERON:0007914;2.44e-09;1!UBERON:0007375;2.44e-09;1!UBERON:0003323;2.44e-09;1!UBERON:0010258;2.44e-09;1!UBERON:0005253;2.44e-09;1!UBERON:0007842;2.44e-09;1!UBERON:0005352;2.44e-09;1!UBERON:0002397;2.44e-09;1!UBERON:0003113;2.44e-09;1!UBERON:0003277;2.44e-09;1!UBERON:0001709;2.44e-09;1!UBERON:0002244;2.44e-09;1!UBERON:0005620;2.44e-09;1!UBERON:0010364;2.44e-09;1!UBERON:0004288;2.44e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.84e-09,1;UBERON:0001000,3.00e-09,1;UBERON:0005352,3.00e-09,1;UBERON:0005705,4.87e-09,1;UBERON:0008193,4.87e-09,1;UBERON:0010912,4.87e-09,1;UBERON:0002514,4.87e-09,1;UBERON:0003457,4.87e-09,1;UBERON:0008907,4.87e-09,1;UBERON:0008001,4.87e-09,1;UBERON:0007213,4.87e-09,1;UBERON:0009891,4.87e-09,1;UBERON:0007914,4.87e-09,1;UBERON:0009292,4.87e-09,1;UBERON:0003099,4.87e-09,1;UBERON:0007375,4.87e-09,1;UBERON:0003323,4.87e-09,1;UBERON:0010258,4.87e-09,1;UBERON:0007842,4.87e-09,1;UBERON:0009494,4.87e-09,1;UBERON:0010042,4.87e-09,1;UBERON:0010045,4.87e-09,1;UBERON:0010259,4.87e-09,1;UBERON:0010359,4.87e-09,1;UBERON:0009526,4.87e-09,1;UBERON:0002397,4.87e-09,1;UBERON:0003113,4.87e-09,1;UBERON:0003277,4.87e-09,1;UBERON:0001709,4.87e-09,1;UBERON:0004066,4.87e-09,1;UBERON:0002244,4.87e-09,1;UBERON:0005620,4.87e-09,1;UBERON:0004362,4.87e-09,1;UBERON:0010364,4.87e-09,1;UBERON:0010046,4.87e-09,1;UBERON:0005868,4.87e-09,1;UBERON:0007238,4.87e-09,1;UBERON:0004288,4.87e-09,1;UBERON:0004068,4.87e-09,1;UBERON:0010334,4.87e-09,1;UBERON:0003852,4.87e-09,1;UBERON:0010253,4.87e-09,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.515151135268373,0.436194716338694,0,0.485168122375632,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0,0.47296445977717,0.689491361473237,0,0,0.564727018627814,1.09162460023138,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,1.7412554317715,1.70215567407342,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0,0,0.209658645508376,0,0.300353785683013,0,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.443067789167242,0.270803863765016,0.128091319725675,0,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0.802622484269139,0,0.113309342697566,0,0.68725489096526,0,0,1.30216690771284,0,0,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0.870648686496336,0.797747763113191,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.280901613404497,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0.635795703478686,0.300091096084402,0,0,0.18611685633159,0,0.292311015483596,0,0.276149695926898,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0.573609190778008,0.121973706129595,0.265059536642971,0.69716365721711,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,1.1240175325762,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0,4.74122638775565,1.71697232418975,0,0.234004265139238,0.297262324577456,0,0,0.283550194484773,0.179117045405697,0,0,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,1.690605505112,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0,0.744323423456331,0,0.841980283299221,0.128139149255701,0,0.64341568457443,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0.483437798366489,0.802025881213139,0.368323955743585,0.459257792658427,0,0.786746489756545,0,0.15403067420883,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0.512900250232778,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,1.21856744815642,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,1.13929437434833,0.714695326373367,0.411362273086194,0,0,0.79312517629427,1.06824071127473,0,0.245040215981032,0.371606350251437,0.28853842595289,0.142283686696828,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0,0,0.50787533340481,0.802940375518498,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.852408440419239,0,0.296964680832639,0.921482106297696,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0.552567831062295,0,0.102268682502155,0.246169610922139,0.311039587661807,0,0.358042349351218,0.511572370226872,0,2.3948309234694,0,0,0.0927680981618513,0,0.7812832832557,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.91153644677601,0.23056390438806,0.807818799687949,0.651884231532048,0.638002319463839,0.183195186803725,1.5991043280559,0,0.470940769185074,0,0,0,0.167821586975843,0,0,0.843992258112108,0.163232808159148,0,0.216388639742091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| ||
|short_description=p@chr20:52193219..52193228,- | |||
}} | }} |
Latest revision as of 15:29, 28 July 2015
Short description: | p@chr20:52193219..52193228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52193219..52193228, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-09 | 1 |
thoracic cancer | 2.45e-09 | 4 |
breast cancer | 2.45e-09 | 4 |
epithelioid sarcoma | 2.55e-09 | 1 |