FFCP PHASE1:Hg19::chr20:30327063..30327138,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:30327063..30327138,+ to FFCP PHASE1:Hg19::chr20:30327063..30327138,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22974 | |EntrezGene=22974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1249 | |HGNC=1249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULW0,Q96RR5 | |UniProt=Q9ULW0,Q96RR5 | ||
|association_with_transcript=0bp_to_ENST00000300403,ENST00000340513_5end | |||
|cluster_id=chr20:30327063..30327138,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_TPX2_5end | |||
|id=chr20:30327063..30327138,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.09e-20!254;CL:0000548!1.74e-18!679;CL:0000004!1.74e-18!679;CL:0000255!1.74e-18!679;CL:0000012!2.37e-18!682;CL:0002321!2.83e-12!248;CL:0000220!1.41e-11!246;CL:0000055!5.19e-10!180;CL:0000003!8.54e-10!722;CL:0000076!7.55e-09!62;CL:0000333!1.44e-07!41;CL:0000063!2.39e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.87e-20,253;CL:0002321,5.59e-12,250;CL:0000076,1.61e-08,63;CL:0000333,1.58e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.48e-56!235;DOID:14566!5.36e-55!239;DOID:0050687!1.70e-29!143;DOID:0050686!9.83e-26!137;DOID:305!3.99e-22!106;DOID:2531!3.50e-17!51;DOID:0060083!3.50e-17!51;DOID:1240!4.10e-13!39;DOID:8692!7.17e-10!31;DOID:7!2.91e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.18e-11;51!DOID:0060083;5.18e-11;51!DOID:1240;1.56e-10;39!DOID:8692;1.20e-09;31!DOID:0050687;1.13e-07;143!DOID:305;3.70e-07;106!DOID:14566;5.50e-07;239!DOID:162;6.30e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-56,235;DOID:14566,3.72e-55,239;DOID:0050687,1.35e-29,143;DOID:0050686,8.62e-26,137;DOID:305,3.35e-22,106;DOID:2531,3.07e-17,51;DOID:0060083,3.07e-17,51;DOID:1240,3.73e-13,39;DOID:8692,6.68e-10,31;DOID:7,2.76e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TPX2 | |||
}} | }} |
Latest revision as of 01:22, 25 September 2015
Short description: | p1@TPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPX2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000300403, ENST00000340513_5end |
EntrezGene: | TPX2 |
HGNC: | 1249 |
UniProt: | Q9ULW0Q96RR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.87e-20 | 253 |
embryonic cell | 5.59e-12 | 250 |
squamous epithelial cell | 1.61e-08 | 63 |
migratory neural crest cell | 1.58e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-56 | 235 |
disease of cellular proliferation | 3.72e-55 | 239 |
cell type cancer | 1.35e-29 | 143 |
organ system cancer | 8.62e-26 | 137 |
carcinoma | 3.35e-22 | 106 |
hematologic cancer | 3.07e-17 | 51 |
immune system cancer | 3.07e-17 | 51 |
leukemia | 3.73e-13 | 39 |
myeloid leukemia | 6.68e-10 | 31 |
disease of anatomical entity | 2.76e-08 | 39 |