FFCP PHASE1:Hg19::chr20:23030296..23030315,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:23030296..23030315,- to FFCP PHASE1:Hg19::chr20:23030296..23030315,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7056 | |EntrezGene=7056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11784 | |HGNC=11784 | ||
|TSSclassifier=strong | |||
|UniProt=P07204 | |UniProt=P07204 | ||
|association_with_transcript=0bp_to_NM_000361,uc002wss.2_5end | |||
|cluster_id=chr20:23030296..23030315,- | |||
|description=CAGE_peak_1_at_THBD_5end | |||
|id=chr20:23030296..23030315,- | |||
|ontology_enrichment_celltype=CL:0002057!4.26e-10!42;CL:0002009!1.77e-09!65;CL:0000766!3.51e-09!76;CL:0002194!5.80e-09!63;CL:0000576!5.80e-09!63;CL:0000040!5.80e-09!63;CL:0000559!5.80e-09!63;CL:0000860!5.59e-08!45;CL:0000557!7.24e-08!71;CL:0002139!1.50e-07!24;CL:0000071!9.23e-07!18;CL:0002546!9.23e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.06e-11;33!CL:0002057;7.06e-11;33!CL:0000473;3.31e-10;39!CL:0000234;3.31e-10;39!CL:0002139;9.56e-08;24!CL:0000071;5.83e-07;18!CL:1000413;9.60e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.57e-12,61;CL:0000473,1.13e-11,48;CL:0000234,1.13e-11,48;CL:0000766,2.08e-11,72;CL:0002194,2.78e-11,59;CL:0000576,2.78e-11,59;CL:0000040,2.78e-11,59;CL:0000559,2.78e-11,59;CL:0000860,2.87e-10,42;CL:0002057,2.87e-10,42;CL:0000557,6.04e-10,67;CL:0000839,2.20e-08,66;CL:0002139,1.14e-07,24;CL:0000115,7.19e-07,36;CL:0000071,7.25e-07,18;CL:0002546,7.25e-07,18;CL:1000413,9.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.53e-08;42!CL:0002546;5.83e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.27e-20!216;UBERON:0000467!1.24e-18!625;UBERON:0000480!2.77e-18!626;UBERON:0000468!1.62e-16!659;UBERON:0000926!8.85e-16!448;UBERON:0004120!8.85e-16!448;UBERON:0006603!8.85e-16!448;UBERON:0002050!3.16e-14!605;UBERON:0005423!3.16e-14!605;UBERON:0000923!5.02e-14!604;UBERON:0005291!5.02e-14!604;UBERON:0006598!5.02e-14!604;UBERON:0002532!5.02e-14!604;UBERON:0000922!9.73e-14!612;UBERON:0004872!1.22e-13!84;UBERON:0001009!1.44e-13!113;UBERON:0007023!1.59e-12!115;UBERON:0004535!1.84e-12!110;UBERON:0001981!2.27e-10!60;UBERON:0007500!2.27e-10!60;UBERON:0004537!2.27e-10!60;UBERON:0006965!2.27e-10!60;UBERON:0003914!5.81e-10!118;UBERON:0000055!9.78e-10!69;UBERON:0001637!9.39e-09!42;UBERON:0003509!9.39e-09!42;UBERON:0004572!9.39e-09!42;UBERON:0002049!1.88e-08!79;UBERON:0007798!1.88e-08!79;UBERON:0000025!2.25e-08!194;UBERON:0002193!7.38e-08!112;UBERON:0004111!1.19e-07!241;UBERON:0004573!1.28e-07!33;UBERON:0004571!1.28e-07!33;UBERON:0000477!1.88e-07!286;UBERON:0000119!2.57e-07!312;UBERON:0002390!4.01e-07!102;UBERON:0003061!4.01e-07!102;UBERON:0000483!4.10e-07!309;UBERON:0000062!9.02e-07!511;UBERON:0001986!9.23e-07!18;UBERON:0004638!9.23e-07!18;UBERON:0004852!9.23e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.28e-07;42!UBERON:0003509;1.28e-07;42!UBERON:0004572;1.28e-07;42!UBERON:0004573;1.98e-07;33!UBERON:0004571;1.98e-07;33!UBERON:0004638;5.83e-07;18!UBERON:0001986;5.83e-07;18!UBERON:0004852;5.83e-07;18!UBERON:0003915;9.60e-07;9!UBERON:0004700;9.60e-07;9!UBERON:0001917;9.60e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.12e-24,203;UBERON:0000926,1.22e-18,315;UBERON:0004120,1.22e-18,315;UBERON:0006603,1.22e-18,315;UBERON:0002050,1.18e-17,564;UBERON:0000923,1.62e-17,560;UBERON:0010316,1.62e-17,560;UBERON:0005291,1.62e-17,560;UBERON:0006598,1.62e-17,560;UBERON:0010317,1.62e-17,560;UBERON:0002532,1.62e-17,560;UBERON:0005423,2.75e-16,581;UBERON:0000922,1.82e-14,592;UBERON:0004872,2.60e-14,83;UBERON:0001009,7.92e-14,112;UBERON:0004535,1.07e-12,109;UBERON:0007023,1.99e-12,114;UBERON:0007500,8.67e-11,59;UBERON:0001981,8.67e-11,59;UBERON:0004537,8.67e-11,59;UBERON:0006965,8.67e-11,59;UBERON:0003914,2.93e-10,117;UBERON:0000055,4.67e-10,68;UBERON:0002193,1.52e-09,108;UBERON:0001637,6.74e-09,42;UBERON:0003509,6.74e-09,42;UBERON:0004572,6.74e-09,42;UBERON:0002390,7.37e-09,98;UBERON:0003061,7.37e-09,98;UBERON:0002049,1.49e-08,78;UBERON:0007798,1.49e-08,78;UBERON:0000025,3.31e-08,192;UBERON:0004573,9.68e-08,33;UBERON:0004571,9.68e-08,33;UBERON:0002405,1.18e-07,93;UBERON:0002371,2.05e-07,76;UBERON:0004111,2.09e-07,240;UBERON:0000119,2.55e-07,309;UBERON:0000483,4.08e-07,306;UBERON:0002204,6.10e-07,167;UBERON:0004638,7.25e-07,18;UBERON:0001986,7.25e-07,18;UBERON:0004852,7.25e-07,18;UBERON:0007100,7.57e-07,27;UBERON:0003915,9.90e-07,9;UBERON:0004700,9.90e-07,9;UBERON:0001917,9.90e-07,9 | |||
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| ||
|short_description=p1@THBD | |||
}} | }} |
Latest revision as of 19:25, 24 September 2015
Short description: | p1@THBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_THBD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_000361, uc002wss.2_5end |
EntrezGene: | THBD |
HGNC: | 11784 |
UniProt: | P07204 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 7.57e-12 | 61 |
defensive cell | 1.13e-11 | 48 |
phagocyte | 1.13e-11 | 48 |
myeloid leukocyte | 2.08e-11 | 72 |
monopoietic cell | 2.78e-11 | 59 |
monocyte | 2.78e-11 | 59 |
monoblast | 2.78e-11 | 59 |
promonocyte | 2.78e-11 | 59 |
classical monocyte | 2.87e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-10 | 42 |
granulocyte monocyte progenitor cell | 6.04e-10 | 67 |
myeloid lineage restricted progenitor cell | 2.20e-08 | 66 |
endothelial cell of vascular tree | 1.14e-07 | 24 |
endothelial cell | 7.19e-07 | 36 |
blood vessel endothelial cell | 7.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.25e-07 | 18 |
endothelial cell of artery | 9.90e-07 | 9 |