FFCP PHASE1:Hg19::chr1:955092..955106,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:955092..955106,+ to FFCP PHASE1:Hg19::chr1:955092..955106,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=375790 | |EntrezGene=375790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=329 | |HGNC=329 | ||
|TSSclassifier=strong | |||
|UniProt=O00468 | |UniProt=O00468 | ||
|association_with_transcript=-396bp_to_ENST00000379370,NM_198576,uc001ack.1_5end | |||
|cluster_id=chr1:955092..955106,+ | |||
|description=CAGE_peak_5_at_AGRN_5end | |||
|id=chr1:955092..955106,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.74e-15!254;CL:0002321!8.90e-09!248;CL:0000220!3.64e-08!246;CL:0000077!4.97e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.98e-07;19!CL:0002252;6.53e-07;1!CL:0002581;6.53e-07;1!CL:0002591;6.53e-07;1!CL:0002599;6.53e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.80e-07,19;CL:0002252,2.82e-07,1;CL:0002581,4.51e-07,1;CL:0002599,4.78e-07,1;CL:0002591,9.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.35e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;6.53e-07;1!DOID:3149;6.53e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.27e-07,4;DOID:1612,8.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.19e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001280;1.11e-08;3!UBERON:0004647;1.11e-08;3!UBERON:0001043;2.15e-08;3!UBERON:0000305;1.01e-07;7!UBERON:0001282;6.53e-07;1!UBERON:0009842;6.53e-07;1!UBERON:0003704;6.53e-07;1!UBERON:0001171;6.53e-07;1!UBERON:0001172;6.53e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,1.02e-08,3;UBERON:0009143,1.02e-08,3;UBERON:0001280,1.79e-08,3;UBERON:0004647,1.79e-08,3;UBERON:0005171,1.79e-08,3;UBERON:0000305,7.22e-08,7;UBERON:0004871,6.18e-07,8 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,0,0.218441372130172,1.58260186937072,0,0.994192127183747,0,0,0,0,0.369363174230364,0.612002073732759,0.940364164434263,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.263504357079378,0.130979075497713,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.732186172644509,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,1.74437620857014,0,0.25326102332916,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0.98667019366864,0,0.404132016209064,0,0.454072282934794,1.72852777344,0,0,0,0,0,0,0.140450806702248,0,0,0,1.18800285728205,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0,0.168776332241266,0.389748020644795,0.252433774244115,0.552299391853796,0.484938170456436,0.710019185033229,0.201504196455281,0,0.57978255948989,0.818238361772504,0,1.09776335516636,0.795178609928912,0.69716365721711,0.518305275076852,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,2.80483547606892,1.2347220339942,0,0,0.982827216677626,0,0,0,0.171567810298526,0.439001141634502,1.1240175325762,0.201057944823262,0.555530670951178,0.651616610620649,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0,0,0.93733833986777,1.17587489739202,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0.190493682876507,1.14596527667483,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,2.61460037580088,0.699810938274399,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0.511707249066704,0.482561763430822,1.48418066444991,0,0,0,1.03850885836724,0.116210378459959,0.120859449591622,1.20303882181971,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,1.64007322849853,0.976135183992909,0.103041011647722,0.54941678891006,0.742585499285292,1.14853107599234,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.661139661443912,0.192190067365106,0.255225424989168,0.2023155617111,0,0.94443704049192,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0,1.46290121726877,0.731140468893853,0,0,0.424216295861138,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0.577332676353072,0,0,0.0941438007767792,0.86101074534246,0,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.852408440419239,0.95497793895076,1.78178808499583,0,0,0,0.445234820091624,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0.449341755736634,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,2.0990399999087,0.724999575434793,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,1.02547850262301,0,0.0897576444097721,0.217294743844016,0.957003479195758,0.366390373607449,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0,0,0.296521128680622,0,0,0.337005664903385,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0.293977192243133,0.522355239482415,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0.264768380074501,0,0.137041924646751,0.19871461170299,0.189932387867636,0.782205530939212,0.320635281006135,0,3.39676336289621,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0.235694034616795,0.543616824294456,0.418411385249333,0,0.288950589901519,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0.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| ||
|short_description=p5@AGRN | |||
}} | }} |
Latest revision as of 23:43, 19 September 2015
Short description: | p5@AGRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AGRN_5end |
Coexpression cluster: | NA |
Association with transcript: | -396bp_to_ENST00000379370, NM_198576, uc001ack.1_5end |
EntrezGene: | AGRN |
HGNC: | 329 |
UniProt: | O00468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.80e-07 | 19 |
epithelial cell of esophagus | 2.82e-07 | 1 |
perirenal preadipocyte | 4.51e-07 | 1 |
smooth muscle cell of the esophagus | 4.78e-07 | 1 |
smooth muscle cell of the pulmonary artery | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
esophagus | 1.02e-08 | 3 |
esophageal region | 1.02e-08 | 3 |
liver parenchyma | 1.79e-08 | 3 |
liver lobule | 1.79e-08 | 3 |
hepatic duct | 1.79e-08 | 3 |
amnion | 7.22e-08 | 7 |
somatic layer of lateral plate mesoderm | 6.18e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.27e-07 | 4 |
breast cancer | 8.27e-07 | 4 |