FFCP PHASE1:Hg19::chr1:95392635..95392704,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:95392635..95392704,- to FFCP PHASE1:Hg19::chr1:95392635..95392704,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1266 | |EntrezGene=1266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2157 | |HGNC=2157 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA86,Q6FHA7 | |UniProt=F8WA86,Q6FHA7 | ||
|association_with_transcript=0bp_to_ENST00000394202,ENST00000538964,uc010otw.1_5end | |||
|cluster_id=chr1:95392635..95392704,- | |||
|description=CAGE_peak_1_at_CNN3_5end | |||
|id=chr1:95392635..95392704,- | |||
|ontology_enrichment_celltype=CL:0000055!1.71e-22!180;CL:0002321!6.70e-11!248;CL:0000220!7.04e-11!246;CL:0000057!1.00e-10!75;CL:0000222!1.69e-09!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.22e-11,76;CL:0002321,3.74e-11,250;CL:0000222,9.62e-10,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.51e-25!365;UBERON:0000119!8.77e-22!312;UBERON:0000483!2.58e-21!309;UBERON:0000481!9.58e-19!347;UBERON:0000477!3.50e-18!286;UBERON:0004111!2.13e-16!241;UBERON:0000468!2.36e-15!659;UBERON:0004121!4.89e-15!169;UBERON:0000924!2.24e-14!173;UBERON:0006601!2.24e-14!173;UBERON:0000025!3.28e-14!194;UBERON:0003075!5.85e-14!86;UBERON:0007284!5.85e-14!86;UBERON:0000033!2.23e-13!123;UBERON:0002346!6.06e-13!90;UBERON:0000073!6.47e-13!94;UBERON:0001016!6.47e-13!94;UBERON:0005743!7.18e-13!86;UBERON:0000153!5.07e-12!129;UBERON:0007811!5.07e-12!129;UBERON:0000467!1.58e-11!625;UBERON:0001017!1.77e-11!82;UBERON:0002100!2.37e-11!216;UBERON:0000480!3.26e-11!626;UBERON:0000490!8.01e-11!138;UBERON:0005256!9.22e-11!143;UBERON:0000922!6.26e-10!612;UBERON:0003056!9.54e-10!61;UBERON:0002050!3.31e-09!605;UBERON:0005423!3.31e-09!605;UBERON:0002049!5.00e-09!79;UBERON:0007798!5.00e-09!79;UBERON:0000923!6.76e-09!604;UBERON:0005291!6.76e-09!604;UBERON:0006598!6.76e-09!604;UBERON:0002532!6.76e-09!604;UBERON:0003914!1.65e-08!118;UBERON:0000955!1.72e-08!69;UBERON:0006238!1.72e-08!69;UBERON:0001049!5.48e-08!57;UBERON:0005068!5.48e-08!57;UBERON:0006241!5.48e-08!57;UBERON:0007135!5.48e-08!57;UBERON:0002616!6.60e-08!59;UBERON:0002104!1.42e-07!21;UBERON:0000064!1.47e-07!219;UBERON:0000970!1.95e-07!20;UBERON:0007625!3.15e-07!11;UBERON:0000019!4.42e-07!19;UBERON:0000047!4.42e-07!19;UBERON:0004088!4.42e-07!19;UBERON:0003072!4.42e-07!19;UBERON:0003071!4.42e-07!19;UBERON:0004128!4.42e-07!19;UBERON:0001032!6.17e-07!24;UBERON:0004456!6.17e-07!24;UBERON:0000020!8.78e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002104;1.39e-07;21!UBERON:0000970;1.90e-07;20!UBERON:0007625;3.08e-07;11!UBERON:0000019;4.30e-07;19!UBERON:0000047;4.30e-07;19!UBERON:0004088;4.30e-07;19!UBERON:0010230;4.30e-07;19!UBERON:0001032;6.06e-07;24!UBERON:0004456;6.06e-07;24!UBERON:0000020;8.61e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.15e-21,309;UBERON:0000483,3.37e-21,306;UBERON:0010314,2.35e-17,132;UBERON:0004111,6.53e-16,240;UBERON:0004121,2.61e-14,171;UBERON:0000924,2.61e-14,171;UBERON:0006601,2.61e-14,171;UBERON:0003075,3.47e-14,82;UBERON:0007284,3.47e-14,82;UBERON:0000025,1.31e-13,192;UBERON:0002346,4.03e-13,86;UBERON:0003104,2.67e-12,160;UBERON:0009142,2.67e-12,160;UBERON:0001016,3.63e-11,89;UBERON:0001017,4.42e-11,81;UBERON:0000490,6.41e-11,148;UBERON:0011216,8.45e-11,223;UBERON:0010371,2.38e-10,104;UBERON:0005256,6.26e-10,122;UBERON:0003056,1.67e-09,61;UBERON:0002100,3.74e-09,199;UBERON:0000922,5.43e-09,592;UBERON:0005423,1.17e-08,581;UBERON:0002049,1.30e-08,78;UBERON:0007798,1.30e-08,78;UBERON:0003914,2.70e-08,117;UBERON:0000955,4.04e-08,68;UBERON:0006238,4.04e-08,68;UBERON:0002050,1.32e-07,564;UBERON:0001049,1.33e-07,56;UBERON:0005068,1.33e-07,56;UBERON:0006241,1.33e-07,56;UBERON:0007135,1.33e-07,56;UBERON:0000970,1.38e-07,21;UBERON:0002104,1.38e-07,21;UBERON:0000923,3.01e-07,560;UBERON:0010316,3.01e-07,560;UBERON:0005291,3.01e-07,560;UBERON:0006598,3.01e-07,560;UBERON:0010317,3.01e-07,560;UBERON:0002532,3.01e-07,560;UBERON:0007625,3.07e-07,11;UBERON:0000019,3.13e-07,20;UBERON:0000047,3.13e-07,20;UBERON:0010312,3.13e-07,20;UBERON:0004088,3.13e-07,20;UBERON:0010230,3.13e-07,20;UBERON:0003072,3.13e-07,20;UBERON:0004128,3.13e-07,20;UBERON:0003071,3.13e-07,20;UBERON:0000020,6.03e-07,24;UBERON:0001032,6.03e-07,24;UBERON:0004456,6.03e-07,24 | |||
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| ||
|short_description=p1@CNN3 | |||
}} | }} |
Latest revision as of 23:41, 19 September 2015
Short description: | p1@CNN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394202, ENST00000538964, uc010otw.1_5end |
EntrezGene: | CNN3 |
HGNC: | 2157 |
UniProt: | F8WA86Q6FHA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.22e-11 | 76 |
embryonic cell | 3.74e-11 | 250 |
mesodermal cell | 9.62e-10 | 121 |