FFCP PHASE1:Hg19::chr1:861095..861136,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:861095..861136,+ to FFCP PHASE1:Hg19::chr1:861095..861136,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148398 | |EntrezGene=148398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28706 | |HGNC=28706 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NU1 | |UniProt=Q96NU1 | ||
|association_with_transcript=0bp_to_ENST00000342066,NM_152486,uc001abw.1_5end | |||
|cluster_id=chr1:861095..861136,+ | |||
|coexpression_cluster_id=C2602 | |||
|description=CAGE_peak_2_at_SAMD11_5end | |||
|id=chr1:861095..861136,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-08!180;CL:0002334!5.64e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.25e-13;12!CL:0002580;1.10e-11;3!CL:0002620;4.51e-11;23!CL:0002579;1.92e-10;3!CL:0002617;6.85e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.21e-13,12;CL:0000057,6.40e-12,76;CL:0002580,1.05e-11,3;CL:0002620,4.36e-11,23;CL:0002579,1.83e-10,3;CL:0002617,8.73e-08,2;CL:0000136,2.24e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!7.37e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.64e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.51e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.20e-08!365;UBERON:0004457!2.78e-08!12;UBERON:0000042!2.78e-08!12;UBERON:0007625!4.71e-08!11;UBERON:0003688!2.24e-07!6;UBERON:0002358!2.24e-07!6;UBERON:0003684!2.24e-07!6;UBERON:0001178!2.24e-07!6;UBERON:0000310!4.93e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.19e-17;9!UBERON:0000042;4.19e-17;9!UBERON:0003688;1.37e-13;6!UBERON:0002358;1.37e-13;6!UBERON:0003684;1.37e-13;6!UBERON:0001178;1.37e-13;6!UBERON:0000310;1.90e-12;10!UBERON:0001443;3.01e-11;11!UBERON:0002346;3.45e-08;4!UBERON:0000923;3.45e-08;4!UBERON:0010316;3.45e-08;4!UBERON:0005291;3.45e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.66e-13,6;UBERON:0002358,1.66e-13,6;UBERON:0003684,1.66e-13,6;UBERON:0001178,1.66e-13,6;UBERON:0000310,2.05e-12,10;UBERON:0004457,2.23e-12,12;UBERON:0000042,2.23e-12,12;UBERON:0001443,3.23e-11,11;UBERON:0002199,1.84e-08,46;UBERON:0002416,1.84e-08,46;UBERON:0002097,3.57e-08,41 | |||
|phase1_expression=5.08699461957559,1.49870366723688,1.55049844505568,2.00146596706261,0.893922188854576,0,2.53299878168311,0,0,0.737201809504527,0,0,0,0,0,0.672325146451775,0,0,0,0.861847406537515,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,3.18662341713812,0,0.486634870302636,0.945348171640679,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94657198515496,0.213557388818567,0.211931901159562,5.10154863343484,0,5.15281080091258,0.558350568994769,4.89451363499672,2.82567314967476,4.79624171063818,0.0920498986422993,0.484938170456436,6.03516307278244,2.31729825923573,2.03472710772585,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.587043471179108,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61576041299968,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,1.3321108950805,0.857867961948885,0.542621605391443,0,0,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0.144781306667579,1.64381058040307,0.895304816199478,0,0,0,0,0.254094624222463,0,3.09315525111078,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0.343143423810856,0,0,0,0,0,0,2.48107807818777,9.36118037057181,5.3325417942284,1.53766979106841,2.04682899626681,1.76939313257968,4.45254199334973,0,0.355123450626254,0,0,0.581051892299796,0,0,0,0.34444334449382,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0.256450125116389,3.60816110269676,1.62689197332152,0,1.83138929636687,1.56768049849117,0,0,0,0.193341436584244,1.69453478826109,0.15350367472613,0,0.429680979473094,0.145016693914229,0,0.890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0.48763373908959,0,1.05650146756755,0,0.707027159768564,0,2.75682671773062,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09789806269672,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,5.50997999976033,0,0,0.254253650292766,0,0.344743373241465,0.583209226766509,1.21537496453305,0,0,0,0,0,0,0.762569244632931,0.83654246567162,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.821425535170343,0.150323419414493,0.829505531177977,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0,0,0,1.58186518546373,0,0,0.0633107959558787,0,0,0.213452994739353,1.79828648623917,0,0.114536596165916,0,0,0,0.942776138467182,0.135904206073614,0.104602846312333,0.917983958726896,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.83591058472493,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0.129282956361551,0.13223260174269,0.513260513652988,0,0.106787412567695,0.628817220398664,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.434674820589684,1.66018361923477,0,0,0,0,0,4.6374729155464,0.447764408660622,0.701139929541673,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.686791410365586,1.34699795506368,1.26184898228651,0,0,0.260994291965212,0.906823702049089,1.85217979459067,0,0.537266523244462,1.85280868296583,0.877136198314828,0,0,0.168942440653073,2.30617366729152,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,1.27894371303652,1.61737217095023,0,0.764467467344097,1.69732529954025,0.637724760305049,12.6414479544182,3.91051442581271,0,0,0,0,1.8374728641192,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.795664888465099,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,1.75871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.0679697329768317,0,0.118193840883968,0,0.313972371402056,0.157115589916002,0,0,0.215927591218621,0,1.71543706023975,0.790068058663633,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0.198950775161368,0.356760272332706,0.11294608203896,0.439762066981716,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0.679708458751268,0.469919589899268,0.580120991762195,0,0,0,0,0,0,0.430018749454354,2.0510303085114,0,0,0.5290268405154,0,0,0,0,0.327796715891087,0.886889507080059,0,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.190941474834495,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=5.08699461957559,1.49870366723688,1.55049844505568,2.00146596706261,0.893922188854576,0,2.53299878168311,0,0,0.737201809504527,0,0,0,0,0,0.672325146451775,0,0,0,0.861847406537515,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,3.18662341713812,0,0.486634870302636,0.945348171640679,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94657198515496,0.213557388818567,0.211931901159562,5.10154863343484,0,5.15281080091258,0.558350568994769,4.89451363499672,2.82567314967476,4.79624171063818,0.0920498986422993,0.484938170456436,6.03516307278244,2.31729825923573,2.03472710772585,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.587043471179108,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61576041299968,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,1.3321108950805,0.857867961948885,0.542621605391443,0,0,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0.144781306667579,1.64381058040307,0.895304816199478,0,0,0,0,0.254094624222463,0,3.09315525111078,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0.343143423810856,0,0,0,0,0,0,2.48107807818777,9.36118037057181,5.3325417942284,1.53766979106841,2.04682899626681,1.76939313257968,4.45254199334973,0,0.355123450626254,0,0,0.581051892299796,0,0,0,0.34444334449382,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0.256450125116389,3.60816110269676,1.62689197332152,0,1.83138929636687,1.56768049849117,0,0,0,0.193341436584244,1.69453478826109,0.15350367472613,0,0.429680979473094,0.145016693914229,0,0.890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0.48763373908959,0,1.05650146756755,0,0.707027159768564,0,2.75682671773062,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09789806269672,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,5.50997999976033,0,0,0.254253650292766,0,0.344743373241465,0.583209226766509,1.21537496453305,0,0,0,0,0,0,0.762569244632931,0.83654246567162,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.821425535170343,0.150323419414493,0.829505531177977,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0,0,0,1.58186518546373,0,0,0.0633107959558787,0,0,0.213452994739353,1.79828648623917,0,0.114536596165916,0,0,0,0.942776138467182,0.135904206073614,0.104602846312333,0.917983958726896,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.83591058472493,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0.129282956361551,0.13223260174269,0.513260513652988,0,0.106787412567695,0.628817220398664,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.434674820589684,1.66018361923477,0,0,0,0,0,4.6374729155464,0.447764408660622,0.701139929541673,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.686791410365586,1.34699795506368,1.26184898228651,0,0,0.260994291965212,0.906823702049089,1.85217979459067,0,0.537266523244462,1.85280868296583,0.877136198314828,0,0,0.168942440653073,2.30617366729152,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,1.27894371303652,1.61737217095023,0,0.764467467344097,1.69732529954025,0.637724760305049,12.6414479544182,3.91051442581271,0,0,0,0,1.8374728641192,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.795664888465099,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,1.75871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.0679697329768317,0,0.118193840883968,0,0.313972371402056,0.157115589916002,0,0,0.215927591218621,0,1.71543706023975,0.790068058663633,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0.198950775161368,0.356760272332706,0.11294608203896,0.439762066981716,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0.679708458751268,0.469919589899268,0.580120991762195,0,0,0,0,0,0,0.430018749454354,2.0510303085114,0,0,0.5290268405154,0,0,0,0,0.327796715891087,0.886889507080059,0,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.190941474834495,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p2@SAMD11 | |||
}} | }} |
Latest revision as of 13:54, 19 September 2015
Short description: | p2@SAMD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAMD11_5end |
Coexpression cluster: | C2602_Fibroblast_merkel_neuroectodermal_neuroepithelioma_Retinal_Preadipocyte_Adipocyte |
Association with transcript: | 0bp_to_ENST00000342066, NM_152486, uc001abw.1_5end |
EntrezGene: | SAMD11 |
HGNC: | 28706 |
UniProt: | Q96NU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.21e-13 | 12 |
fibroblast | 6.40e-12 | 76 |
preadipocyte of the breast | 1.05e-11 | 3 |
skin fibroblast | 4.36e-11 | 23 |
omentum preadipocyte | 1.83e-10 | 3 |
adipocyte of breast | 8.73e-08 | 2 |
fat cell | 2.24e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.66e-13 | 6 |
peritoneum | 1.66e-13 | 6 |
abdominal cavity | 1.66e-13 | 6 |
visceral peritoneum | 1.66e-13 | 6 |
breast | 2.05e-12 | 10 |
cavity lining | 2.23e-12 | 12 |
serous membrane | 2.23e-12 | 12 |
chest | 3.23e-11 | 11 |
integument | 1.84e-08 | 46 |
integumental system | 1.84e-08 | 46 |
skin of body | 3.57e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.51e-11 | 10 |