FFCP PHASE1:Hg19::chr1:68962744..68962772,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:68962744..68962772,- to FFCP PHASE1:Hg19::chr1:68962744..68962772,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55635 | |EntrezGene=55635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22949 | |HGNC=22949 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TB30,E9PL61 | |UniProt=Q5TB30,E9PL61 | ||
|association_with_transcript=0bp_to_ENST00000370964,ENST00000525124_5end | |||
|cluster_id=chr1:68962744..68962772,- | |||
|coexpression_cluster_id=C3508 | |||
|description=CAGE_peak_1_at_DEPDC1_5end | |||
|id=chr1:68962744..68962772,- | |||
|ontology_enrichment_celltype=CL:0000066!1.34e-16!254;CL:0000548!5.15e-12!679;CL:0000004!5.15e-12!679;CL:0000255!5.15e-12!679;CL:0000012!1.39e-11!682;CL:0000055!8.84e-08!180;CL:0002321!4.31e-07!248;CL:0000220!6.35e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-16,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.78e-59!235;DOID:14566!1.76e-58!239;DOID:0050687!2.41e-35!143;DOID:0050686!2.86e-24!137;DOID:305!6.44e-24!106;DOID:2531!3.14e-14!51;DOID:0060083!3.14e-14!51;DOID:1240!6.72e-12!39;DOID:8692!8.82e-10!31;DOID:3095!2.99e-08!22;DOID:2994!2.99e-08!22;DOID:7!1.02e-07!39;DOID:1115!1.03e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.84e-10;31!DOID:1240;1.57e-09;39!DOID:2531;3.01e-09;51!DOID:0060083;3.01e-09;51!DOID:0050687;8.12e-09;143!DOID:3095;1.94e-08;22!DOID:2994;1.94e-08;22!DOID:1115;7.78e-08;20!DOID:305;1.24e-07;106!DOID:162;1.78e-07;235!DOID:14566;2.08e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.32e-59,235;DOID:14566,1.27e-58,239;DOID:0050687,2.17e-35,143;DOID:0050686,6.97e-24,137;DOID:305,7.26e-24,106;DOID:2531,1.05e-14,51;DOID:0060083,1.05e-14,51;DOID:1240,3.34e-12,39;DOID:8692,5.06e-10,31;DOID:3095,1.90e-08,22;DOID:2994,1.90e-08,22;DOID:1115,6.80e-08,20;DOID:7,1.53e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,2.35510576280081,0,0,0,0,0,0.631719873426831,0,6.14334841253772,2.79120467188971,5.24259293112413,2.37390280405608,1.60896258848061,0.331397375727916,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,3.44738962615006,4.28401451612931,1.88072832886853,21.4676990348293,34.2186062682211,32.2644583758643,15.66474817833,14.5318043326404,18.890587515283,0,0,0.464448369948228,11.0330546937471,2.10844143144775,0.369754010166788,0,22.8892464304749,3.22960483268332,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365328307529268,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,7.63813845847723,0,0,0,0.668745981562712,0,0,0,4.2335973616366,0,0,0.270803863765016,4.35510487067296,2.9913649938772,2.95988228286617,4.42160028457357,2.60822777161547,0,0,0,4.19244567980995,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,8.438929081673,19.8791533811511,3.00802746381534,5.5041677205113,3.9764297352555,4.37971383272372,17.2998715410244,10.1995522832779,10.7158438545614,1.57174890597255,1.82147644146271,7.04490441290416,0,0.174129737299267,0.132957960518865,0,0,0,5.96287222100115,4.30117297553062,3.12426451446835,1.13061588384802,2.09749718104953,7.97842321626196,5.8518590630307,1.29208379584664,1.06729878806013,2.00832367658802,2.81980521976403,5.32190474002959,0.488124115096339,6.25027236587977,0,24.0216269084175,27.6171128330189,34.0086671059633,12.2653309972707,1.89853131913626,6.04565754970344,0,0,2.18047026071267,1.49091585508596,8.737505304856,0.132409180813219,6.3104056564739,16.6694139633228,8.41016400213461,2.1349799145941,2.22000793575444,7.78027588499416,8.89090435659941,15.8558046020055,0.908144565869588,0,11.0131072961884,3.1216007683032,4.56377457235559,4.63290909710583,27.0099346880659,26.3852899320054,28.5115137605564,9.59524604897998,27.3920527605243,7.23280468230358,2.37600571456411,3.95627086845691,0,1.43723628363248,34.1722311326754,41.2891115577482,21.0568727767979,10.5354629011401,5.82326812018137,4.20666564938471,22.2327078993641,11.660326319776,0.85422955527427,2.7551147150743,11.4034616512073,3.91599611106068,0.772921620136887,2.41951913231067,10.6329089311998,6.43084234063911,7.06814567883521,2.48534726334208,0.80823028409406,6.74518225781567,9.67220142985347,11.3605596848027,2.51239109112286,5.18217629122586,3.44165514466805,10.1238176087564,7.81925633096763,8.01738205799677,9.95146128147556,11.1021174385276,17.8838905947157,1.56449532329816,0.643240938192885,11.0507937081984,0,0,15.1432704051,17.8699771482788,15.1836948826594,14.2279224824788,13.0727666455444,15.1853196231102,13.8876247404969,15.6977172100277,11.5424147083917,4.42893272774789,2.80483547606892,1.6462960453256,0,0,0.982827216677626,1.18157981336281,14.1268191812688,5.78045661152634,6.86271241194102,0.98775256867763,1.1240175325762,15.4814617513911,11.1106134190236,5.86454949558584,10.3993478527958,8.6598805215164,7.9991979432803,1.29149563659404,2.7429625074604,2.31492756288305,1.90254152234598,4.74122638775565,1.71697232418975,0.984868024349589,2.57404691653161,6.09387765383786,0,1.34385702559088,4.96212840348353,14.15024658705,15.6942326797539,9.20118429996507,2.46331618947972,3.43388892651582,0,0.144119953416961,0,12.1915957040965,2.29193055334967,1.17217447210047,1.71072446022705,5.55268460597947,16.8192112392594,4.0015700568281,6.16720963899484,1.74384027533312,25.2283703224068,0.258543431515556,3.57656445851882,21.977871566456,1.32969058292435,11.4408180602503,6.94459910507784,9.92943924162948,9.59119844457958,6.43400971461664,0,10.70212437815,24.1044776377364,5.68627117988073,22.174652442136,0,0,3.499054691372,0,0.502257091432126,0,2.63587341040741,1.14861935834114,19.9691667057006,8.68687840005475,10.0683398049688,16.4736086180704,30.3750740222459,0,0,0,4.8277978602268,2.60279707715243,2.31986643833309,3.51784157202132,4.46557126157214,0,0,0,0.36807447515742,1.00034104211935,1.89885516589815,2.70362119990049,7.85087550707512,3.46945313074656,7.61419197452636,0.300946099727719,0,1.03473071292505,19.2625423575277,8.11224341583494,14.3357963872337,0,0,0,0,0,0.303127571446259,4.99306318531491,5.14063498660456,0,2.30192959932094,0.561320188866147,0.256278298511402,1.53512174720011,0,0,18.6593729501213,7.45759246315134,19.382008819259,12.4621063004069,11.272406710616,5.31781578203138,0.40101294060657,0,24.1110341145674,19.301663808712,0.917870904715969,4.51199612907412,13.9397760158991,2.35304930753057,7.30696123266303,12.5606438382522,2.27466768141793,4.08224892663638,15.1141141271498,1.54227252690289,4.33514300070165,2.50844886927427,7.13653564526107,7.47968408035852,5.82074362277664,45.1675345890625,39.7381885557849,24.1063117609406,2.95213181129735,2.60302715731442,1.54561517471583,41.1146897034362,35.7266134656146,2.29706215198469,1.30012049207304,8.03419649220798,1.45006077438183,15.0967644772351,16.2713895209697,19.0214470028652,14.5017330572169,14.6466860853371,24.9714018329176,2.938057176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| ||
|short_description=p1@DEPDC1 | |||
}} | }} |
Latest revision as of 03:12, 19 September 2015
Short description: | p1@DEPDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DEPDC1_5end |
Coexpression cluster: | C3508_hepatoblastoma_non_neuroepithelioma_fibrous_Reticulocytes_myxofibrosarcoma_Fibroblast |
Association with transcript: | 0bp_to_ENST00000370964, ENST00000525124_5end |
EntrezGene: | DEPDC1 |
HGNC: | 22949 |
UniProt: | Q5TB30E9PL61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.79e-16 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.32e-59 | 235 |
disease of cellular proliferation | 1.27e-58 | 239 |
cell type cancer | 2.17e-35 | 143 |
organ system cancer | 6.97e-24 | 137 |
carcinoma | 7.26e-24 | 106 |
hematologic cancer | 1.05e-14 | 51 |
immune system cancer | 1.05e-14 | 51 |
leukemia | 3.34e-12 | 39 |
myeloid leukemia | 5.06e-10 | 31 |
germ cell and embryonal cancer | 1.90e-08 | 22 |
germ cell cancer | 1.90e-08 | 22 |
sarcoma | 6.80e-08 | 20 |
disease of anatomical entity | 1.53e-07 | 39 |